Tympanuchus pallidicinctus (lesser prairie-chicken): 128084789
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Entry
128084789 CDS
T08967
Symbol
SETD1B
Name
(RefSeq) histone-lysine N-methyltransferase SETD1B
KO
K11422
[histone H3]-lysine4 N-trimethyltransferase SETD1 [EC:
2.1.1.354
]
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai00310
Lysine degradation
tpai01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
128084789 (SETD1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tpai03036
]
128084789 (SETD1B)
Enzymes [BR:
tpai01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
128084789 (SETD1B)
Chromosome and associated proteins [BR:
tpai03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
128084789 (SETD1B)
HMT complexes
COMPASS/SET1 complex
128084789 (SETD1B)
COMPASS/SET1 complex (yeast)
128084789 (SETD1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
N-SET
SET
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
128084789
NCBI-ProteinID:
XP_052547284
LinkDB
All DBs
Position
Unknown
AA seq
2079 aa
AA seq
DB search
MCRRRRAVRRSRRSQRCIVGGRRRQQRAHTICGGSRKREAGAWRAARAGNRPHVRRGARL
SPPGDDRPPSAMSFREIKAGEKAKHPEDHGKKQSSSWINGMENSTQASTSVEKRNHHWRS
YKLIIDPALKKGQHKLYRYDGQHFSMPNSGIAPVDCVRDPRIGRIWTKTKELELSVPKFK
IDEFYVGPVPPKQVTFAKLNDNIRENFLTDMCKKYGEVEEVEILYNPKNKKHLGIAKVIF
ATVKGAREAVQHLHNTSVMGNIIHVELDTKGETRMRFYELLVNGLYTPQTLPVGTEQDTS
PTVNETLQLTDSLKRLKDSNLSSAGSSVTPNSSTPFSHDTAYSSCRQDTPNSFSQFTPQS
QGTPHTPRLGTPFSQDSTYSSRQTTPVYHFGQDSGYKHRRHETKFTDAYNRRPGGHHYVH
NSPGVFRGTEHQFSTFKSHQQEPVQFSHTPPLSHSSSSSYKSAFSPYQAPAVFPQSEEQP
FAQTSREAEYRRPAPPPAEMVVESSAATSADFAPVKEKPEEPPPLPDSNSAPEPSAPSFS
QTPERSETPGTPTMESEMQHNSLDSRIEMLLKEQRTKLPFLNEHDSDNEVRMEGSPISSS
SSQLSPIPMYGSNSQPGYRAQTPSSRPSSTGLEDISPTPLPDSDDDEPIPGTASLNQNSR
GTSEASMTPIDQLNRTSKVETLEVKEMVPGDQTPISEKMDESQHSSGEDMEISDDEMNSA
PITSAECAKTIVVNSSVSNAAVMAPSIPPLPPPPGFPPLPPPPPPPPQPGFPMPPPLPPP
PPPTHPAVTVPPPPLPAPPGVPPPHILPPLPPFHPGMFPVMQVDMISVLGNHWGGMPMSF
QMQTQMLSRMMQAQNTYQYPPFMAGRMQFVNLPPYRPFSMGAALGRGQQWPPLPKFDPSV
PPPGYEPKKEDPHKATVDGVLLVIVKELKAIMKRDLNRKMVEVVAFRAFDDWWDKKERLA
KASLTPVKSGGELEEKPKPKDRITSCLLENWNKGEGLGYEGIGLGIGLRGAIRLPSFKVK
RKEPPEAASAGDQKRIRPSTSVDDEDEELERDRDASDTTSDLSKKDAEAVGLRRRPARPL
ELDSEGEEGDETSGKEEESSSEKEEEQEEEGGLVKAAPGKEEEEDEDDEEDEDDDEDDED
EEDYEETGVETSDKEEEQDSEEEDVASPSSSKAEVESSDESEDSSEFESSSDSDEDDDEE
EEDEDEEEEEEEEEVAEDQDREAMVAETEHEPASHELLDDKRETILELYPVDYMDATGLG
LSEPALVEKDEGMEEVKAEESECDQVPEESIAAETLKQLVMERDQEPKLALSPICRPVEE
PEPIVMLEPEVQECPKPESQDEAGTVCLSTPVAVFGEPLPNKSSFFRKSDDSCLETHVKT
KLPSAVEEEDRLPRTPGREAVVHSETDILLLPAHKVPSSTLPLPSTPGKEESVVPPEKFP
EQLMVTKTSIEEEIPRTPGRDILAKSSHPLAKSQSTDTVPATPGSDAPLTGSSLTLSSPQ
VPGSPFSYPSQSPGINSGIPRTPGRDFNFTPTFPEAGATIPCLLSGKKQSEDDLEEKPFK
EPLGASLTISMNSVPSPIPFASPTQADFRTDMGLPPNEPIPIAALPCMPGDGRMPIEECK
AEVKSVLLSPEAPIGASILPPPPPPSVLPKRRPGRPRRSPPSVLSLDMYSGKAIEPPPVP
VALVESAMSKELLSAHPDAFYGLKDPEAVTLDFRNDSFHEKIAAETVAEKLPFKELENQW
NEDFKEEEAHVKPKRQWRRQKKSPEHLPVIPSPEYSPPQPQFRPRSEFEEMTILYDIWNG
GIDEEDIKFMCITYDRLLQQDNGMDWLNDTLWVFHPSTSFSTPKKKKRDDGMREHVTGCA
RSEGYYKIDKKDKLKYLNNSRAFAEEPPADTQGMSIPAQPHASTRAGSERRSEQRRLLSS
FTGSCDSDLLKFNQLKFRKKKLKFCKSHIHDWGLFAMEPIAADEMVIEYVGQNIRQVIAD
MREKRYEDEGIGSSYMFRVDHDTIIDATKCGNFARFINHSCNPNCYAKVITVESQKKIVI
YSKQHINVNEEITYDYKFPIEDVKIPCLCGSENCRGTLN
NT seq
6240 nt
NT seq
+upstream
nt +downstream
nt
atgtgcaggcggcggagggcggttaggcgttcgcggcgctcgcagcggtgtattgtggga
ggccgccgccgccagcagcgagcacacacaatatgtggtggctcgcgaaaacgggaggca
ggagcctggcgggcagcccgcgccggtaaccggccccatgtgagacggggagctcgcctt
tcgccgcccggagacgatcggccgccgagcgcgatgtctttccgagagatcaaggcgggg
gaaaaagccaagcaccctgaagatcatggcaaaaagcagagttcaagttggatcaacgga
atggagaacagcacccaagccagcacttctgtcgagaaaagaaatcaccattggagaagt
tacaagttgattattgacccggctctgaaaaaaggacagcacaaactctaccgctacgat
gggcaacatttcagcatgccgaactcgggaattgctcctgtggattgtgtcagagatccc
agaatagggcgaatatggaccaaaacgaaggagttggagctgtctgtccccaaattcaag
attgatgagttttacgtggggccagtgcctcccaagcaggtcacctttgccaagctgaat
gacaacatccgtgaaaactttttaaccgacatgtgcaagaaatacggtgaagtggaagag
gtggagattctctacaaccccaagaacaagaagcacctgggcattgccaaagtgattttt
gccactgtcaaaggtgcccgggaggctgtccagcaccttcacaacacctctgtcatgggc
aacattatccacgtggagctggatacaaaaggtgaaacccgcatgcgattctatgagctg
ctcgttaatggtctttacactcctcagaccctgcctgtaggcactgaacaggacacatcg
ccaactgtgaatgaaaccctccagttgacagattctctgaagcgcttgaaggacagtaac
ctttcctctgcgggatcatctgtcaccccaaacagcagcacgccgttttcccacgacaca
gcctattccagctgtcggcaggacaccccaaactcgttcagtcaattcaccccgcagtcc
caagggacgccccacaccccacggttagggacgccattttcccaagattccacgtattcc
agccgtcagacgacgccagtgtaccactttgggcaggacagtgggtacaaacacaggaga
cacgaaacaaaatttacggatgcctacaaccgtcgaccgggaggacatcactatgttcat
aattctcctggtgttttccgcgggacagagcatcagttcagtacgttcaaatcccatcag
caggagccagttcagttctctcacactcctcccctgagccactcgagttcttcgagttac
aaatctgccttctctccttaccaagcaccagccgtatttccgcagtctgaggagcagccg
tttgcccaaacttccagggaagcagagtaccgaagacctgcaccgcctcccgccgagatg
gtcgtagaaagcagtgctgccaccagcgctgattttgctccagtgaaggagaaaccagag
gaacctccacccttaccagattcaaactctgctcctgagccgagcgcaccgtccttctct
cagacccctgagaggagtgagacccctggcacccccaccatggagtctgaaatgcagcat
aatagtttagactcaaggattgagatgctcttaaaagaacagagaacaaagttacctttt
cttaatgagcatgactcagataatgaggtccgaatggaaggtagccctatctcctcttcc
tcctcccagctctctcccatcccaatgtacggttcgaactctcagcccggttacagagct
cagacaccttcctcacgcccttccagcacgggcctggaggacatcagccccacgccgtta
cctgactctgatgatgatgagcccatccctgggactgcttctctgaatcagaattccagg
ggtacatcagaggccagcatgactcccatcgatcagctgaacaggacctccaaagtcgag
accttggaggttaaagaaatggtgcctggggaccagactccaatatcggaaaagatggac
gagagtcagcattcttcaggggaggacatggaaatctccgacgatgagatgaactccgcg
cccatcaccagtgcagagtgtgccaaaaccattgtggtcaactcctcagtcagcaacgca
gccgtcatggccccatccatccctcctctgccaccgccgcctggattccctcctcttcct
cctcctccaccaccacctccacagccgggttttccgatgcctccgccgctgcctcctccg
cctcctcccacacaccctgctgtcaccgtgccccctccaccactccctgctccccctggg
gtccctccacctcacatcttgcctccgcttcctcccttccatcccggcatgttcccagtc
atgcaggtggatatgatcagtgtcttgggcaaccactggggtggcatgcccatgtccttc
cagatgcaaactcagatgctcagtcggatgatgcaggcacagaacacataccagtatccg
cctttcatggcaggcaggatgcagtttgtgaatctgccgccctaccgcccgttctctatg
ggagcagctcttggtcgtgggcagcagtggccgccactgcccaagtttgacccctcggtt
ccaccgccgggttatgagcccaagaaggaagatccccacaaagccactgtggatggagtc
ctcctggtcatcgtgaaggaactgaaggctatcatgaaaagggacctgaaccggaaaatg
gttgaagtggttgcatttcgggcatttgatgactggtgggacaagaaggaacggctggca
aaggcatctctcacaccagtgaagtctggaggagagctggaggagaaaccaaagccaaag
gatcgaatcacatcttgcctcttggagaactggaacaaaggcgaaggcctgggatacgag
ggaattggcttgggcattgggttacgaggggccatccggttgccatccttcaaggtgaaa
agaaaggagccaccagaagctgcctcagcaggagatcagaagagaatccggccttctact
tctgttgacgatgaagatgaagagttggagagggacagagatgcttccgataccacatcc
gacctgtcaaagaaggatgcagaagcagtggggctgaggcggcgaccagcaaggccactg
gagctcgacagcgagggggaagagggagatgagacatcagggaaagaggaagagtcttcc
tcagagaaagaagaggagcaggaggaagaaggaggcttggtgaaagcagcacctggcaag
gaggaagaggaggatgaagatgatgaggaagatgaagatgacgatgaggatgatgaagat
gaagaggattatgaagagacaggtgttgaaacaagtgacaaagaggaagagcaggactct
gaagaggaagatgtagcgagtccctcatcttccaaggctgaagttgaatcatcagatgaa
agtgaggactcctctgaatttgaatcaagttctgactcagatgaagatgatgatgaggag
gaggaggatgaagatgaagaagaggaggaggaggaagaagaggtggctgaagatcaagac
agagaagccatggttgctgagacggagcatgaacctgcgagtcatgagcttctcgatgat
aagagggagaccattttggagctatatcctgtggactacatggatgcaacgggcttggga
ctctcagagccagctttggtagaaaaggatgaagggatggaagaagtcaaagcagaggaa
agtgaatgtgatcaagtcccagaggaatctattgctgctgaaacactcaaacagttggtt
atggaaagagaccaggagccaaaacttgcactgtctcccatctgcagaccagtggaagag
cctgaacccatcgtcatgctggagccggaggtacaagaatgcccaaagcctgaatcacaa
gatgaggctggcacagtctgtctctcgactccagtggcagtctttggagaacctctgccc
aacaaaagcagcttctttaggaagtctgatgacagctgcttagaaacgcatgttaagaca
aagctgccctctgcagtggaggaggaggacaggttgcctcgcacacctggacgggaagca
gtggtccattcagagactgatattcttttgctcccagcccacaaggtgccatcctccaca
cttcccttaccatcgactcctggtaaagaggaatctgtagtccctccagaaaaattccct
gaacaattaatggtgaccaaaacgtccatagaagaggagattcctaggactcctgggcgg
gacattttggccaagtcttcacacccccttgcaaagtcgcagagcacagacactgttcca
gccacgccaggaagtgatgctccccttacaggaagcagcttgaccctcagttcccctcaa
gtcccagggagccccttttcctacccatcccagtctcctggcattaacagcggcattcct
cggactcctgggagagatttcaatttcacgcctactttcccagaggctggtgctaccatt
ccttgccttctgtctggcaagaaacagtcagaggatgacctagaagagaaaccttttaaa
gagcctcttggtgcttcccttactatcagcatgaacagcgttccttctcctatccccttt
gccagccccacgcaagcagatttccgcacagacatgggcttgccacctaacgagccaata
cccatcgcagccctgccatgcatgcctggagatggaagaatgcccatcgaagagtgcaag
gcggaagtaaaatctgttttgctctcgccagaagcacccattggtgcatctattcttcct
ccaccaccaccaccttctgttcttcccaaaaggaggccgggtcggccaaggcggtcccca
ccttctgtcctctcattggatatgtactcgggcaaagccatcgagccaccccctgtccct
gtggctttggtggaaagtgctatgagcaaagagctactgagtgcacaccccgatgctttc
tatggactgaaggaccctgaagccgtcaccctagatttcaggaatgacagcttccacgag
aaaatagcagctgagacagttgcagagaaactgccatttaaggaattggagaaccagtgg
aatgaagatttcaaggaagaagaagctcacgtgaagcctaaaagacagtggcgaaggcag
aagaagtcacccgagcacctcccagtgattccttccccagagtactccccacctcagcct
cagttcagaccacgctccgagtttgaggagatgaccattttgtatgatatttggaatgga
ggcatagatgaggaagatatcaaattcatgtgtatcacgtatgaccgcctcctgcagcag
gacaatggtatggactggctcaatgacacactgtgggtattccatccttctaccagcttt
tccacccccaagaaaaagaagcgggacgatgggatgcgggagcacgtcacgggctgtgca
cgaagcgaaggctattacaaaatcgataagaaggacaaactcaaatacctcaataatagc
cgagcttttgcagaggagcctccagctgacacgcaggggatgagcatccctgcccaacct
cacgcttccacgcgggctggctccgagcggcggtcagagcagcgcaggctcctctcctcc
ttcactggtagctgtgacagcgacctgctcaagttcaaccagctcaagttccggaagaaa
aagctaaaattctgcaagagccacattcacgactggggcctttttgccatggagcccatt
gcagctgatgagatggtgattgagtacgtgggtcagaacatcaggcaggtcattgctgac
atgcgtgaaaagcgatacgaggatgaaggcattgggagcagttacatgttcagagttgac
catgacacaatcatcgatgctacaaagtgtggaaactttgccaggtttattaatcacagc
tgcaatccaaattgttatgctaaagtgatcacggtggagtctcaaaagaagatcgtcatc
tactcaaaacagcacatcaatgtgaatgaggaaattacttacgactacaagtttcccatt
gaggatgtaaaaatcccatgtttatgtggctctgagaactgcaggggaaccctaaactga
DBGET
integrated database retrieval system
