Thrips palmi (melon thrips): 117650278
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Entry
117650278 CDS
T08251
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin B
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
tpal
Thrips palmi (melon thrips)
Pathway
tpal04120
Ubiquitin mediated proteolysis
tpal04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117650278
04120 Ubiquitin mediated proteolysis
117650278
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tpal04121
]
117650278
Enzymes [BR:
tpal01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117650278
Ubiquitin system [BR:
tpal04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117650278
BRITE hierarchy
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-RING_16
zf-C3HC4_3
zf-RING_11
zf-RING_5
zf-RING-like
zf-ANAPC11
zf-HC5HC2H
zf-C3H2C3
Motif
Other DBs
NCBI-GeneID:
117650278
NCBI-ProteinID:
XP_034249468
UniProt:
A0A6P8ZVU8
LinkDB
All DBs
Position
Unknown
AA seq
645 aa
AA seq
DB search
MRAASITFISLALTSAVVGNAFYHKKQFYPSVVYITKSNPSMAVIYIQALVVVVLMGKLM
QKVFFGQLRAAEFEHLADRSWYAVTETCLAFTLFRDDFAPRFVAQFILLLFLKAFHWLAE
DRVDFMERSPIISWIFHLRVISLMFVLSILDLYFVNHAYESTVSGGASAQIVFGFEYMIL
LMIVVNIGIKYVLHTIDLNSENPWDNKAVFLLYTEVVMGLFKVVLYFTFLIIMVRIFTLP
LFLFRPMYYTLRSFRKAINDVILSRRAIRNMNTLYPDATPEELSAADNVCIICREEMLTA
SKKLPCNHIFHTSCLRSWFQRQQTCPTCRLNILRIPGERNTAANPAAGAEAQAPHAPDVP
PVPHPGLQNPFVNGVFPGMFPFWQQQFNLQPPNPLPNQPHHPPGHPPQQEPSTSSGSASG
PQPGLNAMPPPFPPMPPGFGLPFFYPPFPPTPMPPPFGIPPPMPPPGLAHLNDEELQRME
CAAREGIAARLQCLQNIQQLLDAAVLLMQQYSNAAATAATNLVHVPLVPQMPTASAAPTA
ATPTSSTSSSSSNASATIPSSQPSSSTNRNTPANVKTHSSEVPSSSRSEELKASTDVKIS
PRSEGTPDSTATSSSPSVATGLSREQDEIRRRRLQKFSGNPEPLD
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgagggcggctagcataacatttattagcctggcattaacttcagccgtcgtaggaaat
gcattttatcacaagaaacagttttatccatcggtggtgtatatcactaaatctaacccc
agtatggcggtgatatacatccaagcacttgttgtagttgttctaatgggtaagctaatg
caaaaggttttctttggacaacttcgagctgctgaatttgagcatttggctgaccgttca
tggtacgctgtaacagaaacgtgcctggcatttaccctcttccgggacgactttgctcca
agatttgttgctcaattcatactccttctatttctgaaagcgttccattggcttgcagaa
gatcgtgttgattttatggaaaggagcccaattatatcatggatattccatcttcgagtt
atctcattaatgtttgtcctcagtattctggatctttattttgtgaaccatgcatatgag
tctacagtttctggaggagccagtgctcagattgtttttggatttgagtacatgatactt
ctaatgattgtcgtgaacatcggaattaagtatgtcttgcacacaatagaccttaattca
gaaaatccttgggacaacaaagctgtgtttctgctctacactgaagttgtgatgggcttg
tttaaggttgtgctctattttacattccttattataatggtacgcatctttacattgccc
ctgtttttgtttcgaccaatgtattacacactaaggtcattccgaaaggcaattaatgat
gtaattttgtcccggcgagccattcgaaatatgaacactctttatcccgatgccacccct
gaagagttgtctgctgcagataatgtgtgcatcatttgccgtgaagaaatgcttactgca
tccaaaaagctgccatgtaatcatatatttcacacatcttgcctacgctcatggttccaa
cgtcagcagacatgtcctacatgtcgtcttaatattttacgcattcctggagaacgtaac
actgctgctaatcctgcagcaggtgcggaagctcaggcaccacatgcaccagatgttcct
cccgttcctcatcctggtcttcaaaatccgtttgtcaatggcgtctttccaggaatgttc
ccattctggcagcagcaattcaacctgcaaccaccaaatcctttacccaaccagccacac
catccaccaggccatcctccccagcaggagccatctacctcctcagggtctgcatctgga
ccacagccaggacttaatgctatgccaccaccatttcctcctatgccacctggctttggc
cttccctttttctacccaccttttccacctactcctatgccgccgccatttggtatacca
ccacctatgccacctccaggattagctcatctaaatgatgaagagctgcaaaggatggaa
tgtgctgctcgagaagggattgcagcacggttgcagtgcctccaaaacatccagcaatta
ttggatgcagctgttctcctaatgcagcagtattctaatgcagctgccacagctgcaaca
aatttggttcacgtgccacttgtgccccaaatgccaaccgcatcggcggcgcccactgcc
gccactccaacttcatccacctccagttcctcttccaatgcatccgcaactataccatcc
tcgcagccaagcagcagcacaaacaggaacacacctgcaaatgtaaaaacacacagctcg
gaagttccaagtagcagtagatctgaagaattaaaagcatctactgatgtcaaaatttca
ccaagatcagaaggtacaccagacagtaccgctactagcagcagtccatcagttgcaaca
ggactatcaagagagcaagatgaaattagaaggcgacgtctacaaaaattttcaggaaat
cctgaacccttggactga
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