Trifolium pratense (red clover): 123897289
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Entry
123897289 CDS
T08949
Name
(RefSeq) OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 6
KO
K12655
OTU domain-containing protein 5 [EC:
3.4.19.12
]
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tpra01002
]
123897289
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tpra04121
]
123897289
Enzymes [BR:
tpra01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
123897289
Peptidases and inhibitors [BR:
tpra01002
]
Cysteine peptidases
Family C85
123897289
Ubiquitin system [BR:
tpra04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
123897289
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OTU
Peptidase_C65
UBA
Motif
Other DBs
NCBI-GeneID:
123897289
NCBI-ProteinID:
XP_045803829
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All DBs
Position
LG7:47874012..47880329
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AA seq
537 aa
AA seq
DB search
MTRIYVQRGSSGGGTSQNPNNPNTNPNPNRAGSSSARPEQVTQVQLAAKDEESGEEEPGL
AVGDELLEYAGSGTSNRVKSDGSFMESLHFEESDTPLGNEVLTDLPGKDVKEEVEGSQES
IRLERLVIENEGLCEDNPVSVVGGGGGSSHPPPPPVPPPKPLATSLNSRRSASGSPNAVN
VGSPRRTSVWPVVSARTSPAGSRPSSPRAHNESEGYNSADEQNPCYVSSYDDVERERQFE
IDIRRVKGYEVKRMTEDGNCLFRAVADQVYGDSELYDLVRQMSVDYMERERDHFSQFITE
GFTSYCKRKRRDKVYGNNVEIQAMSEMYNRPIHIYSYSTEPINTFHGSYDTDTPPVRLSY
HHGNHYNSLVDPRRPTIGAGLGFSSLRGTNVDKDQVKAAIKAQQDQQLDNALLAEGRFYS
DLELTEKEIERAVMEASRAEYLVGGTFKKKLGNRESSTSTAEPSSSGARSSGSDPKTEQG
KENDSILSSSIHMLLSMGFSYLQAIEAYSIFGDDVDSMICYLLETGSSSRRKGKATE
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgactcgtatctatgttcagcgtggttcatcgggtggtggtacttcacagaaccctaac
aatcctaacactaatcctaaccctaatcgtgctgggtcttcttcggctcgaccagagcag
gtgacgcaggttcaattggctgctaaggatgaggaaagtggagaggaggaacctggactg
gctgttggtgatgagcttttggagtatgctgggagtgggactagtaacagggtgaagagt
gatggctcttttatggaaagtcttcattttgaggaaagtgatactccattaggcaatgaa
gtattgactgatcttcctgggaaagatgttaaagaagaggttgagggttctcaagaatcg
ataagactcgaaagattggtgatagagaatgagggcttgtgtgaggataatcctgttagt
gttgttggtggtggtggtgggagttcacatcctccacctccacctgttccacctccaaag
cctttggcaactagcttaaattcaagaagaagtgcatcagggtctcctaatgctgttaat
gtaggatcaccaaggagaacatctgtgtggcctgttgtttcggctaggacatcacctgct
gggtctcgaccttcgtctcccagggctcataatgaaagtgaggggtataatagtgctgat
gaacagaatccatgctatgtgtcctcttatgatgatgtagaaagagagcgacagtttgaa
attgatattaggagggtaaaaggctatgaagtaaaaagaatgacagaggatgggaattgc
cttttccgtgctgttgcagaccaagtgtatggggactcagaattgtatgatttggtcagg
cagatgagcgtagattatatggagcgggagagagatcacttttctcaatttataacagaa
ggtttcacctcatactgcaagaggaagagaagagataaggtttatggcaacaatgttgag
atccaagccatgtctgaaatgtacaatcgacctattcatatatactcttattccacagag
cccatcaatacatttcatggaagctatgacactgatacaccacccgtacgcctgagttat
caccatggtaaccattacaactcccttgttgacccacggcgtccaacaattggtgcagga
cttgggttcagctcacttcgtgggacaaatgttgacaaagatcaagtcaaggctgctatt
aaagctcagcaagaccagcaactcgataatgcacttttagctgaggggcggttttactct
gatcttgaactcacagagaaggaaattgaacgagctgtgatggaagcttctcgggctgaa
tatcttgttggtggtacatttaagaaaaaacttggcaatcgagaatcgtctacgtcaact
gctgagccatcttcttctggagcaagatcgtcaggtagtgatcccaaaacggaacagggg
aaagagaatgattctattcttagcagtagcatacatatgttactatcaatgggatttagt
tacctacaagctattgaggcatacagcatatttggggatgatgtcgattctatgatttgt
tacctgttggagactggcagcagtagcagacggaaaggcaaggctactgaataa
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