Trifolium pratense (red clover): 123908315
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Entry
123908315 CDS
T08949
Name
(RefSeq) NAD-capped RNA hydrolase DXO1 isoform X1
KO
K14845
RAT1-interacting protein
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpra03021
]
123908315
03009 Ribosome biogenesis [BR:
tpra03009
]
123908315
Transcription machinery [BR:
tpra03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
123908315
Ribosome biogenesis [BR:
tpra03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
123908315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAI1
Motif
Other DBs
NCBI-GeneID:
123908315
NCBI-ProteinID:
XP_045814877
LinkDB
All DBs
Position
LG2:64408630..64413511
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AA seq
524 aa
AA seq
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MDDTKKNIFGDDSDNEKDGTHSSSPSSSSSAASSSSSSSSSASSSNNTKGSADSSSATGT
ATSGGGAGDDEENGDVVDSSNKADYHHYNDDDDDHQYGDLFASDNEDYSKTLAKSSHPIP
AVLPAVVRNNNTNSSGRGGFGRGGRWQQGHHNDRGGAGILPRPGPYPQRQNFGYGNRFQN
GRHDERFVSEMKLSKSEETLSRKGIIFQEPCELACYSRVEGGEVYFDDRSLRLFKRHITE
DIGADLNEGYDTYIPKKDLGSEGFGDLLACIRDKNLLVQNNIHFVTYRNNLNKILATAYI
RHEPWEMGVHKRNGVVYLDVHKLPERPQSDLDRRRCYLGYAFESLATEDPRRADGEGVHH
VDANVEFCSVIKTKLGAHRILMGAEMDCCDTTNEGKRFYVELKTSYELNYHNEEKFEREK
LLKFWIQSFLAGVPYICIGFRDDAGRLVRTEMLRTKDITQRIKMKGYWQGGVCLAFADEV
FCWLYGTVKENQDYILQFAPPFNRLELLQAQSCPDVITSHLELL
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggatgacacgaagaagaacatattcggcgacgattccgacaacgaaaaagatgggacc
cactcttcttccccttcttcttcctcctccgccgcttcatcttcctcttcttcatcttct
tccgcttcttcctccaataacacaaaaggttccgccgattcatcttccgctaccggaact
gccaccagcggcggtggtgccggtgatgatgaagaaaacggtgatgttgttgatagtagt
aataaggctgattatcatcattataatgatgatgatgatgatcatcaatatggagatcta
tttgcttctgataatgaagattactccaaaaccctcgctaaaagttctcaccctattcct
gcagtattgcctgccgtcgtccgcaataataatacgaacagctcgggaagagggggtttt
ggccgtggtggtcgttggcagcaagggcatcataatgatagaggaggagctggcattctt
ccgcgtcctggaccttatcctcagaggcagaatttcgggtatggtaataggtttcagaat
ggtcgccacgacgagcgatttgtctctgagatgaagctctcgaagagtgaagaaaccctg
tcaagaaaaggcattatttttcaggagccttgtgaacttgcttgctatagtcgtgtagaa
ggtggggaagtatattttgatgaccgtagcttgagactttttaaacgccatatcacggaa
gatattggagctgatttgaacgaaggttatgatacatacattcccaaaaaagacttaggt
tccgagggctttggcgatcttcttgcttgcattagagataaaaatctcctggttcaaaac
aacattcattttgtgacataccgcaacaatcttaacaagatactggctacagcttatatt
cgccatgagccttgggaaatgggagtacacaaaaggaatggtgttgtctatcttgatgtg
cacaagttaccagaaagaccacaaagtgatttagatcgtagaagatgttatctgggatac
gctttcgagagccttgccactgaagatcctagaagagctgatggagagggggtacatcat
gttgatgccaatgttgaattttgttcggtgattaagacaaaattgggagctcaccgtatc
ttgatgggtgctgagatggattgctgtgataccactaatgaaggaaagagattttatgtg
gagttaaagacaagttatgagttgaattatcataatgaggaaaaattcgagagagagaaa
ctgctaaagttttggattcagtcattcctggcaggtgttccatatatttgtataggattt
agggatgacgcaggtcgtcttgttcggacagaaatgcttagaaccaaagatattacacag
agaataaaaatgaaaggctattggcagggtggagtctgccttgcgtttgcggatgaggta
ttctgctggctttatggaacagtcaaagaaaatcaagattacatattgcagttcgctcca
cctttcaaccgtttggagcttctgcaagctcagtcttgcccagatgtaataacaagtcat
ttggagctgttgtga
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