Trifolium pratense (red clover): 123908380
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Entry
123908380 CDS
T08949
Name
(RefSeq) tRNA wybutosine-synthesizing protein 2/3/4
KO
K15450
tRNA wybutosine-synthesizing protein 3 [EC:
2.1.1.282
]
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tpra03016
]
123908380
Enzymes [BR:
tpra01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.282 tRNAPhe 7-[(3-amino-3-carboxypropyl)-4-demethylwyosine37-N4]-methyltransferase
123908380
Transfer RNA biogenesis [BR:
tpra03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
123908380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TYW3
Met_10
Kelch_1
Kelch_3
Kelch_4
Kelch_5
Kelch_2
Kelch_6
MTS
Cons_hypoth95
DNA_methylase
Methyltransf_15
Methyltransf_25
Motif
Other DBs
NCBI-GeneID:
123908380
NCBI-ProteinID:
XP_045814956
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All DBs
Position
LG2:35513615..35521653
Genome browser
AA seq
1047 aa
AA seq
DB search
MEFEKRKSATLASLNSTESDKSPKGSLDIPIIPLINTLNKNPNYFTTSSCSGRISILSQP
ITPIPSLQTKKKAKGGTWIFVSHDPANPDSLVSLLFSSESTQSPKSELVFRFEPLIIAIE
CKDLSSAHSLVSLAISSGFRESGITNANKRVIIAIRCSIRMEVPLGDTHKIMVTPEYVRY
LVQVANEKMEMNRNRTERFLRLLQSNESMLEGDNSNSLSPTNGVELACDHLQLDDQSQLT
YGKAPENQSGFVGSPGFNLPIAHIEIVGEPVEKLFLWGHSACALDNADHKKVIVCGGFGG
LGRHARRNDLLLLDPYSGNLETISTFGCACPSPRLGHTASLVGDLMFVIGGRTGPDKILS
DVWSLDTTKNCWKLLQCGGSVFPPRHRHAAAVMGSNIYVFGGLDNDIIFSSFYVLDTINL
HWKEIPVSGDWPNARHSHAMVASDSQIFMFGGYDGGKALGDLYSFDVQMGHWKKEITAGK
NPHARFSHSIFVYKNYLGVLGGCPITQHCQELALLDLKLCIWKHVTLKSVGKDLFVRSTA
NIVGDDLVIVGGGASCYAFGTKFSEPAKVSLLHLMHSHDNYMPFKNQRQHMIGQNGGLKG
NKVENSQGHQLEHIPNISETESLCFNDNVPHINGQSQMIPLHCVLQLEKKYAKQGKDILK
KFGWLDLGRKAYSEEGGVHICFPVCQELFAVFHERSRHSRDAIDQENEIPLSKPLSQDGY
LLNKLSCSEALTLLHEYGAILLEDKVVETKKTAMSPLKVMTEAITSLVEKKGLPAELLEE
LPTRWDRIDDIVILPATSFKNILWDSIAEELWLIVAKSLKARRLARQGPVAATGTRDSTL
EILVGDDGWVNHKENGILYSFDVTKCMFSWGNLSEKLRMAKLDCKDEVIVDLFAGIGYFV
LPFLVRAQAKFVYACEWNPHAIEALRHNLQSNSVADRCILLEGDNRNTAPKGVADRVCLG
LLPSSECSWVTAVRALRREGGILHVHGNTKDSEECQWTDHVSKSIYEIAKSEGYCWEVSI
EHVERVKWYAPHIRHIVADVRCRQIQR
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atggaattcgaaaaacgaaaatcagcgacattagcttcattgaactcaacagaatcagat
aaatcaccaaaaggttcattagatataccaattatccctctaatcaatactctcaacaaa
aaccctaattacttcaccacaagttcttgctccggtagaatttcaatcctctcacaacct
atcactccaattccgtcacttcaaacaaagaaaaaagctaaaggtggcacttggattttc
gtttcccatgatcctgcaaatcctgactcgctcgtttcacttcttttctcatccgagtca
actcaatcccctaaatccgaacttgttttcagattcgaaccgttaattatcgctatcgaa
tgtaaagatctttcttctgctcattcactcgtttctcttgcgatttcttctggttttaga
gaatcagggattaccaatgctaataaacgagttatcattgcaattcgttgttcgatacgc
atggaagttccgttgggtgatacgcataagattatggttacgcctgagtatgttcgttac
cttgttcaagttgcaaatgaaaaaatggaaatgaataggaatagaactgagaggtttctt
cgattgttgcagtctaatgaatcaatgcttgagggtgataacagtaacagtttgtcgccg
acgaatggtgtagagcttgcttgcgatcatcttcagcttgatgatcaatctcaattaaca
tatgggaaagcccctgaaaaccagtcagggtttgtgggttctcctggttttaatctgcca
attgcccatattgaaattgttggtgaaccggtggaaaaacttttcctctggggtcactct
gcctgtgctctggataatgccgaccacaagaaagtcattgtatgtggtggctttggaggg
ctggggaggcatgctagaagaaatgatttgttgctgcttgatccgtattctggcaatctt
gaaacaatcagcacttttgggtgtgcctgtccatctccgcggttaggccatacagcttcc
ttggttggggatttgatgtttgtgattggaggtcggaccggtcctgataaaattctgagt
gatgtatggagcctcgatacaactaagaattgttggaagctactgcaatgtggtggcagt
gtctttcctcccaggcatcgacatgctgcagctgtaatggggtcaaacatttatgtattt
ggaggacttgacaatgatattatcttttcctccttttatgttcttgacacaattaattta
cactggaaagaaattccagtttctggggactggccaaatgcacgtcactctcatgcaatg
gtagcatctgattctcagatttttatgtttggtggatatgacggtgggaaagcacttggg
gatttgtatagctttgatgttcagatgggtcactggaagaaggaaataacagctggaaag
aatccacatgccaggttctcgcactcaatttttgtctacaagaattatcttggagttctt
ggtggttgtccaataacacagcattgtcaagagttggctttacttgatttgaagctttgt
atatggaaacatgttacccttaaatctgtaggtaaagatttatttgtgcgaagtacagcc
aacatcgtcggtgatgatcttgttatagttgggggtggtgcatcgtgctatgcatttgga
accaagttcagtgagccagcaaaagttagcttgctccatttaatgcattcacatgataat
tatatgcctttcaaaaaccaaagacagcatatgattggccaaaatggagggttgaaaggg
aataaggttgaaaattctcaaggacaccaacttgaacatataccgaatatatctgaaact
gaaagtttatgttttaatgataatgtgcctcacatcaatggtcaaagtcagatgattcca
ttgcattgtgttctgcaactggagaagaaatatgcaaaacagggtaaggatatactgaag
aaatttggatggttagacttagggaggaaggcatactctgaagagggtggagtacatatc
tgttttcctgtctgtcaagagctttttgctgtatttcatgaaaggagtcgtcattccaga
gatgcaattgatcaggaaaatgaaattccactttcaaaaccactttcacaagatggatac
ttgttaaataagttatcctgctctgaagcattgactctgctccatgaatatggtgctatt
cttctggaagataaggttgttgaaacaaaaaaaactgcaatgtctccgttgaaagtaatg
actgaagcaataacgtctttggttgagaaaaagggcctaccagctgagcttctagaggaa
ctgccgacaaggtgggatcggattgatgatattgttatacttccagctacttcattcaag
aatattttgtgggactctattgcagaagagctctggctaattgttgccaaatcccttaag
gctcgccgtcttgctcgccaaggcccggttgctgcaactggtacaagagatagtacattg
gagattcttgttggagatgatggttgggtcaaccataaagaaaatggaatactctattct
tttgatgttacaaaatgcatgttctcatggggtaatctttctgagaaactccggatggcc
aagttggattgcaaagatgaggttatagtagatttgtttgcgggcattggctactttgtg
ctaccttttcttgtcagggcccaggcaaaatttgtatatgcatgtgagtggaacccccat
gctatagaagcactccgacataatctacaatcaaattctgtggctgaccggtgtatccta
cttgaaggagataatcgaaatacagctcccaagggtgtggcggatagagtctgtcttggt
ctccttccatctagtgaatgtagctgggtcacagctgtgagggctttaaggagagaaggt
ggaatattacatgttcatgggaatacaaaggactctgaggagtgtcagtggactgatcat
gtatcaaagtcaatatatgaaattgctaaatctgaaggatattgttgggaggtttctata
gagcatgttgaaagggttaaatggtatgctccacacattcgccacattgttgcagatgta
agatgcagacaaatccagagataa
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