Trifolium pratense (red clover): 54614133
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Entry
54614133 CDS
T08949
Symbol
rbcL, HJE17_pgp043
Name
(RefSeq) ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit
KO
K01601
ribulose-bisphosphate carboxylase large chain [EC:
4.1.1.39
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra00630
Glyoxylate and dicarboxylate metabolism
tpra00710
Carbon fixation in photosynthetic organisms
tpra01100
Metabolic pathways
tpra01110
Biosynthesis of secondary metabolites
tpra01200
Carbon metabolism
Module
tpra_M00165
Reductive pentose phosphate cycle (Calvin cycle)
tpra_M00532
Photorespiration
tpra_M00611
Oxygenic photosynthesis in plants and cyanobacteria
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
54614133 (rbcL)
09102 Energy metabolism
00710 Carbon fixation in photosynthetic organisms
54614133 (rbcL)
Enzymes [BR:
tpra01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
54614133 (rbcL)
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Motif
Pfam:
RuBisCO_large
RuBisCO_large_N
Motif
Other DBs
NCBI-GeneID:
54614133
NCBI-ProteinID:
YP_009772723
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Position
Pltd:complement(48633..50060)
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AA seq
475 aa
AA seq
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MAPQTETKAQVGFKAGVKDYRLTYYTPDYETKDTDILAAFRVTPQPGVPPEEAGAAVAAE
SSTGTWTTVWTDGLTSLDRYKGRCYHIEPVAGEDTQFIAYVAYPLDLFEEGSVTNMFTSI
VGNVFGFKALRALRLEDLRIPVAYVKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGL
SAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETGEIKGHYL
NATAGTCEEMIKRAVFARELGVPIVMHDYLTGGFTANTTLAHYCRDNGLLLHIHRAMHAV
IDRQKNHGMHFRVLAKALRLSGGDHIHAGTVVGKLEGEREITLGFVDLLRDDYVEKDRSR
GIFFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVAN
RVALEACVQARNEGRDLAREGNDIIRAAAKWSPELAAACEVWKEIKFEFPAMDTL
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggcaccacaaacagaaactaaagcacaggttgggttcaaagctggtgttaaagattat
aggttgacttattatactcctgactatgaaaccaaagatactgatatcttggcagcattc
cgagtaactcctcaacccggagttccgcccgaagaagcaggtgcagcggtagctgccgaa
tcttccactgggacatggacaactgtgtggaccgatggacttaccagtcttgatcgttat
aaaggacgctgctatcacatcgagcctgttgctggagaagatactcaatttattgcttat
gtagcttatcccttagacctttttgaagaaggttctgttactaacatgtttacctctatt
gtaggtaatgtatttgggttcaaggccttgcgtgctctacgtctggaagatttgcgaatc
cccgttgcttatgttaaaactttccaaggtcctcctcacggaatccaagttgagagagat
aaattgaacaagtatggacgtcccctattgggatgtactattaaacctaaattgggttta
tccgctaagaattacggtagagcagtttatgaatgtctacgcggtggacttgattttaca
aaagatgatgaaaatgtgaactcccaaccatttatgcgttggagagaccgtttcttattt
tgtgccgaagctatttataaatcacaggccgaaacaggtgaaatcaaaggacattatttg
aatgcaactgcgggtacatgtgaagaaatgataaaaagggctgtatttgcgagagaattg
ggcgttcctatcgtaatgcacgactacttaacaggtggattcactgcaaatactaccttg
gctcactattgccgcgataatggtctacttcttcatatccaccgtgcaatgcatgcagtt
atcgatagacagaaaaatcatggtatgcactttcgtgtattagctaaagcgttacgtttg
tctggtggagatcatattcacgctggtactgtagtaggtaaacttgaaggagaaagggag
attactttaggttttgttgacttactacgtgatgattatgttgaaaaagatagaagtcgc
ggtatttttttcactcaggattgggtttctttaccgggtgttctgcctgttgcttcaggg
ggtatccacgtttggcatatgcccgctctgaccgagatttttggagatgattctgtactt
caattcggcggaggaactttaggacacccctggggaaatgcacctggtgccgtagcgaat
cgagtcgctctggaagcatgtgtacaagctcggaatgagggacgtgatcttgctcgtgag
ggaaatgatattatccgtgcagctgccaaatggagtcctgaattagccgctgcttgtgaa
gtctggaaggagatcaaatttgaattcccagcaatggatactttgtaa
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