Thalassiosira pseudonana: THAPSDRAFT_11084
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Entry
THAPSDRAFT_11084 CDS
T01078
Name
(RefSeq) predicted protein
Organism
tps
Thalassiosira pseudonana
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FG-GAP_2
peroxidase
Motif
Other DBs
NCBI-GeneID:
7442634
NCBI-ProteinID:
XP_002296995
JGI:
11084
UniProt:
B8LD06
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Position
19
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AA seq
1741 aa
AA seq
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MVDLDGASPLMATLLYIGSAYIFVFAGGQWAHSAKLIAASGMTGGFGYSVGLHGQVAVVG
SPIENELKGSVYVFVQQSVGVWNEEAKIEASDGASHDWFGSSVDLRNGRLLVGAYNQGGD
DVTNGAGAAYVFDRFGTQWNEVAKLTAGDGEAGDMFGYSVALDKSNKDQVIVGSHLDGGG
CGSAYVIVQSGGVWTQEIKLLPQDDNCDANSDSYFGWSVAFDGDTVIIGNWNGAWLFRRQ
GVGLGWEGGKIAPTDVDFDGSLMRVDIDGGKAVMGAALTSDNKITGVAYTFAHTEPPLDS
FAFSVALEDDTLFVGTPFDDTQGENFGTVQIYDASLTSQPTPSLTEPQPVLSCTLDTKII
PEDGTVDDHFGYSLALSGDTLLVSAPHDDENGINSGSAYVYVNDGNNWVLEAKLLPDNGS
AGDVFGASVALDGDLAIVSAWNSEMPQIHPVNSGSVYVFVRDASTWTQETQLFASDGVDD
DGFGYSVALVAETADVATLLIGAPYQHNSVSFNTGSVYVFNRSWTLEQGHLWDETMKITA
SDPIQIGYFGMSVALSMETQTAAVGAVGQSGSVYIFVGSGVWNEEAKITSVDGGVHDHFG
WGVALDNDRVVVSSNPDGNGKVYVFERDAGTNQWTQQASLLPDSPLCDDGYGFSVALHND
KVLVGSLASGSCNGSAFLFTRDATGTWTEEMHFSSENFNFNFGQSVALDESTVAVGSNLV
EGGDNSGSAHVIECSLETPPLPTPYPTPLTPSCMHATTIIPDDGNQGDHFGYSLALSGDT
LLLGAPFDDENGVESGSAYVYVHDGVDWVLQTRLLPSDGSAGDMFGWSVALDGNLAVVSA
WNTAPCCNAVQKRGSVYVFLRTDSTWSQENQLFPSDGIQIIDNVRAPESDPLGFGHSVAL
VAASDSDDTVATVLVGAPYRVTGVGSNTGTVYVFSRTWVDGVGGMWSETAKIEPNDSVHH
AGYFGWSVALSADTKTAVLGAIGDGFKSLEDDNNGSVYVYVFDENNGAWSEEAKITDGNG
MDGDRFGWSVALDNDRVLVSSVPISGGNAYVFERTTGTTQWTHEATLIPETTPCQDNYAL
TVALQDNRAVVGSFASGLCNGSAFIFTRSDSTGAWSEEMHFSPETFNGNNGWNVAVAVDD
SRVVVSSDYVGDVNSGSAHVIECTSSAPPPTPPTSTPALCPGAAKVPNECELDLLIDSLE
LFVRGDHKLIAQWVRAAFHDAGTFNQVTNEGGANGCLMNHRPMRDEPENSFLHAPLTTLH
AIKNFWMSHEATCIDISSADMLQFAAFFATTRQSGTSQRLTPEKREILKTSFKWGRHDET
ECDTMWTANLPGFVTDAAGGAMPGRCLAAGKEIKEKMMDKNGFTAEEATVLIGAHTIGQI
RNTFGEALPWVFNGDDHATADGPVFDNAFHNFLINDIVATTASGFDAANGGDISPFAIDF
GTWFRSEDPRGMHLLNHLVTDIALAFPSEDTSVHPDYHQHTVRFANDNDEFVSKFFVALD
KMSMLGVGAETVSQPTVCTPSVTTGCGTTGTRRLASEGGLNLDDAFDLMRDLGNATAFAD
QSISEVQAARKDEIEQLTIPRFVAGLTTEPTKKPTPLPTSLPTAKSGTNRYYPDYKSNTC
KKDCGSGVGCGGVLKDPSEATFKSASECCAVQLFNTAEECCGAKVSWRSANECIADTENI
PAVGTDDWYIDWKLQKCVKNCSKNNGTSCGGIAQRWDVLYTTSALCCGTLRWVDSDECVL
A
NT seq
5226 nt
NT seq
+upstream
nt +downstream
nt
atggtggatttggatggagcatcgcccttgatggcgactctgctatacataggatctgcc
tacatattcgtcttcgccggagggcagtgggctcattcagccaagcttatcgctgcaagt
ggtatgactggtggctttggatactccgttggattgcatggacaggtggctgttgtcgga
tctccgattgagaacgaactcaagggatccgtgtatgtgtttgttcaacagagcgttggg
gtgtggaatgaagaagctaagattgaagcaagcgatggggcatctcatgactggtttggg
agtagcgttgatttgcgtaatggtcggttgctagttggagcatacaatcaagggggagac
gatgttactaacggcgctggtgcagcctatgtgtttgatcgctttggtactcagtggaat
gaagtagcaaagttgactgcgggtgatggcgaggctggtgatatgttcggatactctgtg
gcattggacaagagcaacaaggatcaggtgatcgttggctctcatcttgatggaggtggt
tgtggctcagcttacgtgattgttcagagtggaggagtgtggacacaggagatcaagctt
ctacctcaggacgacaattgcgacgctaatagtgatagctattttggatggagcgtagca
tttgatggagacaccgttattattggaaattggaatggagcttggttgtttcggcggcag
ggggttggtttaggttgggaaggagggaagattgcacccactgatgtggatttcgacgga
agtctaatgagggtagacattgacggcggcaaagcagttatgggggcagcgctcacgagt
gacaacaaaatcaccggcgtggcatacactttcgctcatacggaacctcctctcgactca
tttgccttttccgttgcgttggaggatgataccttgttcgtcggaacaccatttgatgat
acccaaggagaaaattttgggacagttcagatttacgatgcttctctcacatcgcagcca
actccatccctcacggaaccacaaccagtactttcatgcactcttgatacaaagatcatt
cccgaagatggaacggtggatgatcactttggttacagtttagctctttcgggagatact
ctactcgtcagtgctcctcacgacgacgagaatggtattaacagtggttcagcatatgtt
tacgtcaacgatggcaacaattgggtgctagaggcaaagcttctgccagataatggatcg
gctggggacgtttttggagcgagcgtagctttggacggtgacctcgctattgtctcagcg
tggaacagtgagatgcctcaaattcatcctgtaaacagtggctctgtttatgtattcgtt
cgtgatgcctctacgtggacacaggaaacgcagctctttgccagtgatggtgttgacgac
gatgggtttggctacagcgttgctttggtagcagagactgctgacgttgccacgttgctc
atcggtgcaccttatcaacataacagcgtcagtttcaacacaggatcggtctacgtcttc
aacaggtcgtggacgctcgaacagggacacttgtgggatgaaacaatgaagattactgca
agtgatccaatccaaatcggttattttggaatgtcagtagctctctcgatggaaactcaa
actgccgctgtcggagctgtcggacaatctggctctgtctatatctttgtgggaagcggt
gtttggaatgaagaagcaaagattacttctgtggacggaggggtccacgatcactttgga
tggggtgtggcattggacaacgatcgagttgtcgtatcgtctaatcctgatggtaatggc
aaagtatatgtctttgagcgagatgcaggaacaaatcagtggactcaacaagcatctctt
cttccagactctcctctatgtgatgacggatatggattcagtgtggcattgcacaacgac
aaagtgctagttggctcactagcttctggctcgtgcaatggctcagcattcctcttcact
cgtgatgcaaccggaacgtggactgaggaaatgcatttctcatccgagaacttcaacttt
aactttggtcaaagcgtcgcattggatgaaagcactgttgctgttggctctaatttagtg
gaaggtggcgacaacagtggttctgcacacgtgattgagtgctcattggaaactcctcct
cttcccacgccttacccaactccactgactccatcttgtatgcacgctacaacgattatt
ccagacgatggaaatcaaggtgatcactttgggtatagtctggctctttccggagacact
ctcctcttgggtgctccctttgatgacgagaatggtgtcgagagtggctcggcttatgtt
tacgtccacgatggagtcgattgggtactacagacaaggcttctcccgagcgatggatcg
gctggggacatgtttggttggagtgtggcattggacggcaatcttgctgttgtttcagca
tggaatactgctccttgttgcaatgccgttcagaaacgtggctccgtatatgtcttcctc
cgcaccgattctacgtggtcacaggaaaaccagctcttcccgagtgacggtatacaaatc
atcgataacgtccgtgcccctgaaagcgacccgttgggttttggtcacagtgtcgctttg
gttgcagcttctgactcagatgacacagtcgcaacagttcttgttggcgctccttatcga
gtcacaggcgtcggctccaatacaggaacagtgtacgtcttcagcaggacttgggtagac
ggggtaggaggcatgtggagtgaaacggcaaagattgaaccgaatgattccgtgcaccat
gctggctactttggatggtcagtagctctctctgcggataccaaaactgccgtattagga
gccatcggtgatggattcaaatctcttgaagatgacaacaatggttctgtttacgtctac
gtcttcgatgagaataatggagcatggagtgaagaggcaaagatcactgacggaaacgga
atggacggcgatcgttttggatggagtgttgcattggacaacgatcgcgtccttgtgtcg
tcagtacccatcagtggaggcaacgcatacgtgtttgagcgtaccacaggaacaactcag
tggactcatgaagcaactcttattccagaaacaactccctgtcaagacaactatgcactc
acagtggcactgcaagacaacagggcagtagtcggctcttttgcttctggcttgtgcaat
ggatctgcattcatatttactcgaagtgattccaccggggcgtggtctgaggaaatgcac
ttctcgcccgagacctttaacggcaacaacggctggaacgttgcggtcgcagtggatgac
tcaagagtcgtcgtgagctctgattacgttggggacgttaacagtggaagtgcccatgtt
attgagtgcacgtcatcggctcctcctccaacgccgcctacttctacaccagccttgtgc
cctggtgcagcaaaggtgccaaacgaatgtgaattggatcttcttatcgattctcttgag
ttgtttgtacgtggagaccacaagttaatcgcacaatgggttcgtgcggccttccacgat
gcaggcactttcaaccaagtaacaaacgagggtggtgccaacggttgtctgatgaaccat
cgtccgatgcgagatgagcctgagaactcattcctccacgctcctctgacgactctgcat
gccattaagaacttttggatgtctcatgaagccacatgtattgacatatcttccgccgat
atgctccagttcgcagcattcttcgcaacaacgcgtcaatctggaacatcacaacgtctc
acccctgagaagagagagatactcaagacttccttcaagtggggacgtcatgacgagacc
gagtgcgatacaatgtggacggctaacttgcctggtttcgtaactgatgctgctggagga
gcgatgcccgggagatgcttagctgcaggaaaggaaattaaagagaagatgatggacaag
aatggctttacggcagaggaggcaactgtgctcattggagctcataccatcgggcagatc
cgcaacacatttggcgaggctttaccgtgggtgtttaacggtgatgaccatgccactgca
gatggaccggtcttcgacaatgccttccacaacttcctcatcaatgatattgtggccaca
acggcatctggatttgacgctgccaatggaggtgatattagcccctttgctatcgacttt
ggcacttggtttcgttctgaagacccacgtggcatgcatctcttgaatcacttggttacc
gatatcgcattagcgttcccctcggaggatacgagtgttcaccctgactatcatcaacac
acggttagatttgcaaatgacaatgacgagtttgtgagcaagttcttcgttgcattggac
aagatgagcatgcttggcgttggcgctgaaactgtatctcaacctacagtatgtacacct
tcagttactaccggctgtggcacaacaggaacgagacgtcttgctagtgaaggaggactc
aatctcgacgatgcattcgacttaatgagagatctcggtaatgctactgccttcgctgac
caatcgatcagtgaagttcaagcagcacgaaaggacgagattgagcagcttacaatacct
cgatttgtcgcaggccttactacagagcccacaaagaagccgacgccactgccaacatca
ttgcctacggccaagtctggcaccaatcgctattatcctgattacaagtcaaacacctgc
aagaaagactgtggctccggagttgggtgtggaggagtattaaaagatccttcagaggcg
actttcaagtcagcctctgaatgttgtgcagttcagttgttcaacacagcggaagaatgc
tgtggagcgaaagtaagttggagatcagcaaatgagtgcatcgcagacactgaaaacatt
ccggctgtcggaacagacgactggtatattgattggaagttgcaaaagtgtgtcaaaaac
tgctccaagaacaacgggacttcttgtggtggtattgcacagaggtgggacgtgctctac
accacttccgccttgtgttgtggcacgttgaggtgggtagattcggatgaatgcgttcta
gcttag
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