KEGG   Thalassiosira pseudonana: THAPSDRAFT_11594
Entry
THAPSDRAFT_11594  CDS       T01078                                 
Name
(RefSeq) predicted protein
  KO
K22755  E3 UFM1-protein ligase 1 [EC:2.3.2.-]
Organism
tps  Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:tps00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tps04121]
    THAPSDRAFT_11594
Ubiquitin system [BR:tps04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   THAPSDRAFT_11594
SSDB
Motif
Pfam: E3_UFM1_ligase TRP
Other DBs
NCBI-GeneID: 7443396
NCBI-ProteinID: XP_002294761
JGI: 11594
UniProt: B8CEZ8
LinkDB
Position
20:complement(580096..582969)
AA seq 899 aa
MDSTLSWEILSRLSLRSIRNGGSGGLPFFIQRDGDTSPASTNGERGATSTSEDIHGCDGH
DIFFTACPVFTADVPTASISSSSVPVVYSLEKIKKEFIHVLHQHGDSINGGRLSTKIISM
WLGMEEEEVTILGDMICKELTEPKNGVSEEAETVVVDVCRLYNPVKQQHEYALKMYLFKQ
MVQQIKIHCSFELSGDNDFAPSLEAIAKQTIQLSSSKLVPMGTVSTQQLSQELEMSIEDV
VRILQELFGEKYSYLRKSTRLDTNFVAIADAHSDTPTEVCNSSVSDSQANHHIENQILGS
LSGATNPTSLASLFPQMNIDVETISPIVQSLCGNGQLHGVLSNGIFTPEIYTDTQRSAVD
SFFRTNGYLTEKKCAAFGLSRNRIEEFVHASFPDGTMLTHSIIDSAKICLPLEAAVQSAI
LNNAFVDLKAVLPAEIASSDDDTKLIIYDCLPRQLCELEDMSTHGEYIRGITVLNSEMCL
FCSAAMVMNASELMGTLVEKYSKLKAKDIVEGSTSSDMIPISQVAKCIADQYPELSTMQQ
QYDSRLNVYRNGDSELQWEREENDLLVSDGPLVEFCRRALFTDKLQQTCSRAVKAEVDRL
QSTRHGVSVSTSMNGAARMQNTEEAFESSFKEICYLLQLFSKSIDAVGKIADEKTTFNMK
KELLIGCGSCLAKRITEYCLFKNGTDDNGGLVFQSTSGSEAPTFHTPVDKSTLAFPFISL
QSKPDKNGTPRDPLAHLESLFPGGIGLGLSRMWSLCSEKDMEEEREDRLDAFQRHLQDVC
LTTVGIPFAIIDKKNEKRLLADRRQALLHVLESSFDKEQVWMIVVVLIYQLVKSSSVAGK
LTIQAVLAHFGREKKIPQVVTEALLKLQMNDCAESDELLSRVKTFGSAKNTKALSALSG
NT seq 2700 nt   +upstreamnt  +downstreamnt
atggattcaacactctcatgggagatactctcccgtctctccctgcgctctatccgaaac
ggtggctcaggggggttgcccttcttcatccaacgagacggtgatacatcaccggcatca
acaaatggtgaacggggtgccacgtcaacatcagaagatatccatggctgtgatggccac
gatatcttcttcacggcttgtcctgtgttcaccgctgatgtacccactgcatccatctcg
tcgtctagtgtaccggttgtgtactctctggagaaaatcaagaaggagttcatccacgtg
ttacatcagcacggagacagtatcaacgggggaagattgtcaacgaaaattattagcatg
tggcttggtatggaagaggaggaagttactatattgggagacatgatttgcaaagagctc
acggaaccaaagaacggagtctcagaagaagcagagacagtagtggttgatgtgtgcaga
ctgtacaatcctgtcaaacagcaacatgagtatgcgttgaagatgtatttgttcaagcag
atggtccaacagatcaaaatacactgctcttttgaattgagtggtgacaatgatttcgct
ccttcgttagaagcaattgcaaagcaaacgatccaattatcatctagtaagttggtaccc
atgggaactgtatcgacacaacaactctcacaggaactggagatgtctattgaagacgtt
gttcgtatattacaagagttgtttggcgagaagtacagctatctacgaaagagtactagg
cttgatacgaactttgtcgcaattgctgatgcacactcagacactccaacggaggtgtgc
aacagcagtgtttcagattcacaagccaaccaccacattgagaatcagatattgggttcc
ttgtcgggggcaactaatccaacatcgcttgcgagtctattccctcaaatgaacatcgac
gttgaaaccatctctcccatcgtacagtctctttgtggcaacggccaactacacggagta
ctttctaatggaatttttactcctgaaatctacactgacactcagcgaagtgcagtggac
tctttcttccgtacaaatggctatctgactgaaaagaagtgtgctgcgtttgggttgtct
cggaatcgtattgaagagttcgtacacgcgtcttttccggatggaacaatgttgactcat
tccatcattgactcagcaaagatatgtcttccgcttgaggctgcagttcaatcagcgata
ctcaacaatgcgtttgtagacttgaaagcagtattgcctgcggagattgcctctagcgac
gatgatacaaaattgatcatttatgactgtttgccgcggcaactatgtgaactggaagac
atgtcaactcacggcgaatacatccgcggcatcacagtgctcaatagtgaaatgtgtctg
ttttgtagtgcagctatggttatgaatgctagtgaactgatgggaactctcgttgaaaaa
tacagcaaactcaaggcgaaggatatcgtggaaggaagcacttcttcggatatgatacct
ataagccaagttgcgaagtgcattgctgatcagtatccggagctgtctacaatgcaacaa
cagtacgattctagactaaatgtctaccgcaatggtgacagtgagctacaatgggaaagg
gaggaaaacgatcttcttgtcagtgatggcccgttagtagagttctgtcgtcgcgctctg
ttcacggacaaactgcaacaaacgtgttcacgtgctgtcaaggcagaggtggatcgtcta
caatctactcgacatggagtctctgtgagcaccagtatgaatggtgcagcaaggatgcaa
aacaccgaggaggcatttgagtcgtcattcaaagaaatctgctacctgctacagctcttt
tccaaatcgatcgatgcagttgggaaaattgctgatgaaaagacaacatttaatatgaaa
aaagaactgctaattggttgcgggagctgtcttgcgaagcgaatcacggaatactgtctc
ttcaagaacggaactgatgacaacggtgggctagtgtttcagtctactagcggatcagag
gcaccgacgtttcatactcccgttgataagtcaacattggcgtttccattcatctcacta
cagtccaagcccgacaagaacggaacgcctcgtgatcctcttgcacaccttgaatcattg
tttcctgggggcatcgggctgggtctatcccgcatgtggagtctctgttcagaaaaagac
atggaagaggagagagaggatagacttgacgcatttcaacgtcatttgcaggatgtatgc
ttgacaacagtgggcattccttttgcaataatagacaagaagaatgaaaagcggttgttg
gcagatcgtcggcaggctctacttcacgtccttgaatcctcgtttgacaaggagcaggta
tggatgatagtagtcgtcttgatctatcagttggtgaagagttcttccgtggcagggaaa
ctaacaatacaagcggttctcgctcactttggacgagagaagaagattccacaagtagtg
acagaagcactgctaaagttgcagatgaacgattgcgcggaatcagacgagttactatct
cgagtgaagacatttggctctgcaaagaatacaaaggctttgtctgcattatctggttga

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