Thalassiosira pseudonana: THAPSDRAFT_11594
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Entry
THAPSDRAFT_11594 CDS
T01078
Name
(RefSeq) predicted protein
KO
K22755
E3 UFM1-protein ligase 1 [EC:2.3.2.-]
Organism
tps
Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tps04121
]
THAPSDRAFT_11594
Ubiquitin system [BR:
tps04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
THAPSDRAFT_11594
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
E3_UFM1_ligase
TRP
Motif
Other DBs
NCBI-GeneID:
7443396
NCBI-ProteinID:
XP_002294761
JGI:
11594
UniProt:
B8CEZ8
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All DBs
Position
20:complement(580096..582969)
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AA seq
899 aa
AA seq
DB search
MDSTLSWEILSRLSLRSIRNGGSGGLPFFIQRDGDTSPASTNGERGATSTSEDIHGCDGH
DIFFTACPVFTADVPTASISSSSVPVVYSLEKIKKEFIHVLHQHGDSINGGRLSTKIISM
WLGMEEEEVTILGDMICKELTEPKNGVSEEAETVVVDVCRLYNPVKQQHEYALKMYLFKQ
MVQQIKIHCSFELSGDNDFAPSLEAIAKQTIQLSSSKLVPMGTVSTQQLSQELEMSIEDV
VRILQELFGEKYSYLRKSTRLDTNFVAIADAHSDTPTEVCNSSVSDSQANHHIENQILGS
LSGATNPTSLASLFPQMNIDVETISPIVQSLCGNGQLHGVLSNGIFTPEIYTDTQRSAVD
SFFRTNGYLTEKKCAAFGLSRNRIEEFVHASFPDGTMLTHSIIDSAKICLPLEAAVQSAI
LNNAFVDLKAVLPAEIASSDDDTKLIIYDCLPRQLCELEDMSTHGEYIRGITVLNSEMCL
FCSAAMVMNASELMGTLVEKYSKLKAKDIVEGSTSSDMIPISQVAKCIADQYPELSTMQQ
QYDSRLNVYRNGDSELQWEREENDLLVSDGPLVEFCRRALFTDKLQQTCSRAVKAEVDRL
QSTRHGVSVSTSMNGAARMQNTEEAFESSFKEICYLLQLFSKSIDAVGKIADEKTTFNMK
KELLIGCGSCLAKRITEYCLFKNGTDDNGGLVFQSTSGSEAPTFHTPVDKSTLAFPFISL
QSKPDKNGTPRDPLAHLESLFPGGIGLGLSRMWSLCSEKDMEEEREDRLDAFQRHLQDVC
LTTVGIPFAIIDKKNEKRLLADRRQALLHVLESSFDKEQVWMIVVVLIYQLVKSSSVAGK
LTIQAVLAHFGREKKIPQVVTEALLKLQMNDCAESDELLSRVKTFGSAKNTKALSALSG
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atggattcaacactctcatgggagatactctcccgtctctccctgcgctctatccgaaac
ggtggctcaggggggttgcccttcttcatccaacgagacggtgatacatcaccggcatca
acaaatggtgaacggggtgccacgtcaacatcagaagatatccatggctgtgatggccac
gatatcttcttcacggcttgtcctgtgttcaccgctgatgtacccactgcatccatctcg
tcgtctagtgtaccggttgtgtactctctggagaaaatcaagaaggagttcatccacgtg
ttacatcagcacggagacagtatcaacgggggaagattgtcaacgaaaattattagcatg
tggcttggtatggaagaggaggaagttactatattgggagacatgatttgcaaagagctc
acggaaccaaagaacggagtctcagaagaagcagagacagtagtggttgatgtgtgcaga
ctgtacaatcctgtcaaacagcaacatgagtatgcgttgaagatgtatttgttcaagcag
atggtccaacagatcaaaatacactgctcttttgaattgagtggtgacaatgatttcgct
ccttcgttagaagcaattgcaaagcaaacgatccaattatcatctagtaagttggtaccc
atgggaactgtatcgacacaacaactctcacaggaactggagatgtctattgaagacgtt
gttcgtatattacaagagttgtttggcgagaagtacagctatctacgaaagagtactagg
cttgatacgaactttgtcgcaattgctgatgcacactcagacactccaacggaggtgtgc
aacagcagtgtttcagattcacaagccaaccaccacattgagaatcagatattgggttcc
ttgtcgggggcaactaatccaacatcgcttgcgagtctattccctcaaatgaacatcgac
gttgaaaccatctctcccatcgtacagtctctttgtggcaacggccaactacacggagta
ctttctaatggaatttttactcctgaaatctacactgacactcagcgaagtgcagtggac
tctttcttccgtacaaatggctatctgactgaaaagaagtgtgctgcgtttgggttgtct
cggaatcgtattgaagagttcgtacacgcgtcttttccggatggaacaatgttgactcat
tccatcattgactcagcaaagatatgtcttccgcttgaggctgcagttcaatcagcgata
ctcaacaatgcgtttgtagacttgaaagcagtattgcctgcggagattgcctctagcgac
gatgatacaaaattgatcatttatgactgtttgccgcggcaactatgtgaactggaagac
atgtcaactcacggcgaatacatccgcggcatcacagtgctcaatagtgaaatgtgtctg
ttttgtagtgcagctatggttatgaatgctagtgaactgatgggaactctcgttgaaaaa
tacagcaaactcaaggcgaaggatatcgtggaaggaagcacttcttcggatatgatacct
ataagccaagttgcgaagtgcattgctgatcagtatccggagctgtctacaatgcaacaa
cagtacgattctagactaaatgtctaccgcaatggtgacagtgagctacaatgggaaagg
gaggaaaacgatcttcttgtcagtgatggcccgttagtagagttctgtcgtcgcgctctg
ttcacggacaaactgcaacaaacgtgttcacgtgctgtcaaggcagaggtggatcgtcta
caatctactcgacatggagtctctgtgagcaccagtatgaatggtgcagcaaggatgcaa
aacaccgaggaggcatttgagtcgtcattcaaagaaatctgctacctgctacagctcttt
tccaaatcgatcgatgcagttgggaaaattgctgatgaaaagacaacatttaatatgaaa
aaagaactgctaattggttgcgggagctgtcttgcgaagcgaatcacggaatactgtctc
ttcaagaacggaactgatgacaacggtgggctagtgtttcagtctactagcggatcagag
gcaccgacgtttcatactcccgttgataagtcaacattggcgtttccattcatctcacta
cagtccaagcccgacaagaacggaacgcctcgtgatcctcttgcacaccttgaatcattg
tttcctgggggcatcgggctgggtctatcccgcatgtggagtctctgttcagaaaaagac
atggaagaggagagagaggatagacttgacgcatttcaacgtcatttgcaggatgtatgc
ttgacaacagtgggcattccttttgcaataatagacaagaagaatgaaaagcggttgttg
gcagatcgtcggcaggctctacttcacgtccttgaatcctcgtttgacaaggagcaggta
tggatgatagtagtcgtcttgatctatcagttggtgaagagttcttccgtggcagggaaa
ctaacaatacaagcggttctcgctcactttggacgagagaagaagattccacaagtagtg
acagaagcactgctaaagttgcagatgaacgattgcgcggaatcagacgagttactatct
cgagtgaagacatttggctctgcaaagaatacaaaggctttgtctgcattatctggttga
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