Thalassiosira pseudonana: THAPSDRAFT_1456
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Entry
THAPSDRAFT_1456 CDS
T01078
Symbol
IDH1
Name
(RefSeq) hypothetical protein
Organism
tps
Thalassiosira pseudonana
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IDH
Motif
Other DBs
NCBI-GeneID:
7445278
NCBI-ProteinID:
XP_002286238
JGI:
1456
UniProt:
B8BR03
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Position
1:1563405..1565782
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AA seq
662 aa
AA seq
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MYRMNDVKLPNVSASIPQLDACVAELRSKGYDVPLYPHEPKDDEERSIQARYATVLGSAV
NPVLREGNSDRRVAAPVKAYAQKNPHKMGIWSKASRTHVSHMDKGDFFASEQSTTVKDAT
DVVIEHVSPDGTVTVLKDSTKLQAGEVIDAATMSVEDLCAFYEREITDAKESDILLSLHL
KATMMKVSDPIIFGHCVKVFFEPVFRKHGPLLEEIGANPNNGLGAVLEAIENKLEPEKAK
EIKNDIDACYEERPWLAMVNSDKGITNLHVPSDIIIDASMPVVVRDSGQMWNKDNELEDT
KCLIPDRCYATMYQEVISYCKAHGQFDVATMGNVANVGLMAQKAEEYGSHDKTFEIPAQG
VVLVRDKNSGDVYFEHSVKKGDLWRMCQTKDEPIKDWVKLAVNRAKATGDRAIFWLDKRR
AHDASLIEKVNLYLQDHDLSGTDISIMKPVDAIRKSMERCTDGKNTISVTGNVLRDYLTD
LFPILELGTSAKMLSIVPLLNGGGLYETGAGGSAPKHVQQFVKEGHLRWDSLGEYLATAV
AFEHLGSITDNKKSQLLAKTLNQAVGRILNNRKSPSRRVKEIDNRATSFYVALYWAEYLA
AEDDTYKPIFEKLSANRSKIVEEFKACQGEPVDLGGYYLFDHNKTEHAMLPSATLNEIMN
EV
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgtatgaatgatgtcaagctacccaacgtctcagctagcatccctcaactcgac
gcctgcgtcgccgagcttcgctctaaaggatatgatgtacctctttatcctcacgaaccc
aaagatgacgaagagcgatccatccaagctcgttatgccactgttctcggtagtgccgta
aaccctgtacttcgagaaggaaactctgatcgtcgtgttgccgcacccgtcaaagcctat
gctcagaagaatccacacaagatgggtatttggagtaaggcaagcaggacgcatgtgtct
cacatggataagggtgacttttttgcgagcgagcagagtactacggtgaaggatgcgacg
gatgtcgtgattgagcacgtatcacctgatggaactgtcactgtgttgaaggacagcaca
aagttgcaagccggagaagtcattgacgcagcaacaatgagtgtggaagacttgtgtgcc
ttttacgagagggagattactgatgccaaggaaagcgacattctgctcagtttacacctc
aaagcgacaatgatgaaagtatccgaccctatcatctttggccattgtgtcaaggtcttc
ttcgagccagtgtttcgtaaacatggaccgttgttggaggagattggagcgaacccaaac
aatggtctcggagcagtacttgaggctattgagaacaagcttgaacctgaaaaggcaaag
gaaatcaagaatgatattgacgcgtgttatgaggagaggccttggcttgctatggtgaac
tcagataagggtatcaccaacttgcacgttccttcggatatcattatcgatgcatcaatg
cccgtcgtagtccgcgacagtggtcagatgtggaacaaagacaacgagttggaagatacc
aagtgccttattcctgatcgttgctacgctacaatgtaccaagaagtcatttcttattgc
aaagctcacgggcagtttgatgtggccaccatgggcaacgttgccaatgtaggtctgatg
gctcagaaggccgaggagtacggctctcacgataagacgttcgaaatacctgcccagggc
gtcgttctcgtccgtgacaagaactcgggtgatgtatactttgagcacagtgtgaagaag
ggcgacctttggaggatgtgtcagacaaaggacgagcccatcaaagactgggtaaagcta
gccgtcaaccgtgccaaggctactggtgacagagcaattttttggcttgacaaacgaagg
gcacacgatgcatctcttatcgaaaaggtcaatctttacctccaggatcacgatctcagc
ggtacggacatttcaatcatgaagcctgttgacgcaattcgcaagtccatggagcgttgt
actgatggcaagaataccatttcggtgactggaaacgtattgcgtgactacctcactgac
ttgttccccatccttgagttgggaacttctgccaaaatgctttccattgtacctctcttg
aacggtggaggattgtacgagactggagctggtggatctgctcccaaacacgtgcagcag
tttgtgaaggagggacatttgcgttgggatagtctcggagagtacttggcaactgctgta
gcttttgagcacctagggtcgatcactgacaacaaaaagtctcagctcttggcaaagact
ttgaaccaggctgttggacgtatcctcaacaatcgtaagagtccctctcgtcgcgtgaag
gagatcgacaacagagccaccagtttctacgttgcattgtactgggccgagtaccttgct
gcggaagatgacacttacaaacccatttttgagaagttatctgccaacagaagcaagatc
gtggaggagttcaaggcttgccagggagagcctgttgatctcggaggatactacctcttc
gatcacaacaaaacggagcatgctatgcttccgtctgcaacattgaacgaaattatgaat
gaagtgtag
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