Thalassiosira pseudonana: THAPSDRAFT_1720
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Entry
THAPSDRAFT_1720 CDS
T01078
Name
(RefSeq) predicted protein
Organism
tps
Thalassiosira pseudonana
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_2
Motif
Other DBs
NCBI-GeneID:
7449026
NCBI-ProteinID:
XP_002286947
JGI:
1720
UniProt:
B8BRR5
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Position
1:complement(2251096..2253151)
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AA seq
677 aa
AA seq
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MAKNQMKLATGEHIVCLGGIELPVKAECCTHQDVCPKEQLRRNDMGTEDDGIGEGDDDII
IRDKSSRKSSRIDASKQQQDDEDDDGVLPDMTGRIITVSDVVEDFDEPHFKSKQQRQSQR
SSRRNEKASHKRDKKTKNDARRQMSTADLQEGQLPDFTGMCIEVCPTDDQLIPSTPKRAA
ASMVETDLDSLINEEKSTIMSVSANRRAGGRSNRGVNNLGGSMNSSSFGGSVPLPVRSSL
HSSFLTSFSGTNNPSMRSLYSIGNMSLGDNNGMAPPPLPPLERVQSGHVYVEDEVQCDKR
LFSLFDQSTSGKARNGSNRTLLTASTTRPSQRTILSALEGVEELSLCSEERYSTPSYRQT
KEVDFVVSCKSATESLSIERSTGSRLTRGNDLAKPASSPCANQALRSSLRHRNNEGSAAS
SRPGVSRGISWASLISRENKAKAQMLSREEAYGQSSNSLLSSASDTPRTTPSSIQQSDDP
EYIKTRASEKFQRGIFYARQGNYSIARERFLTALRYRVMHYGSKSLEVAMVHEMLGHVEY
FMRIEDQDDLISCSDDDCNGEGDSRSWNVVTAADSERTSGKEKLGQVHADRAAMHYQSAL
DILDCNQLDWSDSSRTFKSFSEHVGNLQFSWTGVSQSYTELDDEDRMFEVLARIRERMDS
LPATAGKSTSSFLRTIS
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaatcaaatgaagcttgccaccggtgagcacattgtttgtttagggggtatt
gagttgccagtgaaggccgagtgctgtacgcatcaagatgtctgtccgaaggagcagctt
cgtcgcaacgacatgggaactgaagacgatggtatcggcgaaggagacgatgatattatt
atccgggacaagtcgtctcgcaaatcaagcagaatcgatgcttccaaacaacaacaagac
gatgaagacgatgatggagtccttcctgacatgactggtagaataatcacagtgtctgat
gttgttgaagattttgacgaaccgcatttcaagagcaaacagcaacgtcaaagtcaacgg
agcagccgtcgtaatgaaaaagcatcacacaaacgagataaaaagacaaagaacgatgcc
aggcgtcaaatgtcaaccgccgatctgcaagagggacaactccccgactttacggggatg
tgtattgaggtatgtccaactgacgatcaactcattccatcgactcccaagcgagctgca
gcctctatggtagaaactgatttggattctttgattaatgaagagaagagtaccattatg
agcgtcagtgccaatagacgggctggcggacgatccaaccgtggggtaaacaacttggga
gggagcatgaatagctcatcatttggtggtagtgttcctctacccgtgaggtcatctctg
cattcatcctttcttacttcgtttagcggtaccaacaatccttcaatgagatctctatat
agtattggcaatatgagcttgggcgacaacaatggtatggctcctccgccgctccctccg
ttagaacgtgtacagagtgggcacgtctacgtcgaggatgaagttcaatgtgataaaaga
ttgttctctctcttcgatcaatcaacgagtggaaaggcacgcaatgggtcaaatcggacg
ctgttaacagcaagcacgactcgtccatcgcaaagaaccatcctttcagcattggaagga
gtggaagaactttctttgtgtagcgaagaacgatacagcacaccctcttatcgtcaaacc
aaggaagttgattttgtagtttcttgcaagtcagcaactgaatctctttccatcgagcgt
tccactggtagtcgcctcacaagaggcaacgacttggcaaagccagcttcctctccatgt
gccaatcaggcactccgttcaagtctcagacatcgcaacaacgaaggtagtgctgcctcg
tctcgtccaggagtctctcgtggcatttcatgggcatctctcatatcgcgggaaaacaaa
gcgaaagcacaaatgctatccagagaggaagcctatggtcagtcgagtaactctctcttg
tccagtgccagcgatactccaagaactaccccctcttcaattcaacaaagtgatgatccc
gagtatatcaaaactagggcgtccgagaagtttcaacgaggaatcttctatgctcgtcaa
ggtaactacagcattgctcgagagaggtttctgactgcattgcggtatagagtaatgcat
tatgggtcaaaatcgttagaggtggcaatggttcacgaaatgctgggtcatgtagagtac
tttatgagaatagaagatcaagacgacttgatttcatgcagcgacgatgattgcaatggt
gaaggtgactctcgtagttggaatgttgtgacagctgcggattccgaacgtactagtggc
aaggagaaactaggacaagttcacgcagatagggcagcgatgcattatcaatcagcattg
gatatcttggattgcaaccagttggattggtccgactccagcagaactttcaagagtttc
tctgagcacgtcggcaacttgcaattcagctggactggagtaagccaatcgtatactgag
ttggacgatgaggatagaatgtttgaagttttggccaggatacgagagaggatggattca
ttgcctgctactgctggcaagtctacttcgtcattcttaagaacaatatcgtag
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