Thalassiosira pseudonana: THAPSDRAFT_21640
Help
Entry
THAPSDRAFT_21640 CDS
T01078
Name
(RefSeq) predicted protein
Organism
tps
Thalassiosira pseudonana
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Iso_dh
EF-hand_6
EF-hand_1
EF-hand_7
DUF2063
Rap1a
Motif
Other DBs
NCBI-GeneID:
7441754
NCBI-ProteinID:
XP_002288203
JGI:
21640
UniProt:
B8BX37
LinkDB
All DBs
Position
3:375480..377528
Genome browser
AA seq
560 aa
AA seq
DB search
MATSLRILSSRCLTAATSKKAFGITASLNGARQLSSLSTTSSYITTSKSNHNGQYQPSIL
RATQSTSVRYQSTSDKPKIKAPPMVYIQGEEMTHYATQLLLNQWIEPYFDISSWETFDLS
CKARDDSDDATLIDAVEAGKRIGAIFKEPTITPSAIQVQEMGLKKAWGSPNGAMRRGWNG
ITISRDTIHIEGIELGYKNQVLFERHAVGGEYGAGWNEVGEGTLLTTYIPKDGGAPFVVD
KRDLTDKHNVCVVYHNPYDNVRELAHLFFKRCLEHKVTPYIVTKKTVFKWQEGFWATMKR
VFDDTYKDEFLKAGLLDRSGGELTHLISDAATMQLIRWTDGGFGMAAHNYDGDMLTDQIA
QVHRSPGFITSNLVGVSDDGTTLIKEFEASHGTVTDLWNDHLAGKETSLNPLGLVEALLG
AMCHAAQLEYDAKPNDVEAKRMYEYVNNFTNTLRMALHNTFRYGQGTRDMCGPTGFTTED
FIAKVAWRLDRYLEQQSEESAPPELKEEDLALPASKLADFDQKAIMKLFEKYDKSGEGKI
DFKNFSKMLVKMGVAPKKSS
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggcaacatctcttcgtatcctctcctcacgatgcctcacggcagcaacctcgaaaaag
gcattcggcatcaccgcatcactcaacggtgcacgtcaattgtcctctctctccacaaca
tcgtcatacatcaccacctccaagagcaaccacaatggccaatatcaaccatccatcctt
cgtgccacccaatcgacctccgttcgttaccaatccacctccgacaaaccgaagatcaaa
gccccacccatggtctacatccaaggcgaagaaatgacccactacgccacccaactcctc
ctcaaccaatggatcgaaccctacttcgacatctcctcctgggaaacgttcgacttgtcg
tgcaaggcacgcgacgattccgacgatgccacgctcattgatgccgtggaggcggggaaa
cgcatcggagccatcttcaaggagccgacgatcactccctcggcgattcaggtgcaggag
atggggttgaagaaggcttgggggagtccgaacggggctatgcgtagagggtggaatggt
attacgattagtagggatactattcacattgagggtatcgaacttggatacaagaaccaa
gtgttgtttgaacgtcatgccgtgggaggagagtatggagctggatggaacgaagtgggc
gaggggactttgttgactacctacatccccaaggatggaggtgctcccttcgtggtggat
aagcgtgatttgaccgataagcacaatgtgtgtgtggtgtatcacaatccctatgataat
gtgagggagttggctcatttgttcttcaagaggtgcttggaacacaaagtgacgccttat
attgttacgaagaagactgtgttcaagtggcaagagggattttgggctactatgaagagg
gtgtttgatgacacgtacaaggatgaatttttgaaggccggacttctcgacagatctgga
ggagaactgacccatctcatctctgatgctgccaccatgcagttgattcgttggaccgac
ggaggatttggaatggctgctcacaactacgatggagatatgctaacggatcagattgct
caagtacatcgttctcccggattcatcacttccaatcttgtcggtgtctctgacgatgga
accactcttatcaaagagtttgaggcctctcatggaactgtcactgatctttggaatgat
caccttgctggaaaggaaacatctctcaaccccctcggattggtggaagctcttctcggt
gccatgtgtcatgctgctcagttggaatacgatgccaagcccaatgatgttgaggcgaaa
aggatgtatgagtatgtcaacaactttaccaacacgcttcgtatggcattgcacaatacc
ttcaggtatggacagggtactcgtgacatgtgtggacccactggcttcactactgaggac
tttatcgccaaggtagcatggcgtctcgacagatacttggagcaacaatcggaggagagt
gctccgccagagttgaaggaggaggatttggcattgcctgctagtaagttggcggacttt
gatcagaaggcgattatgaaattgtttgagaagtatgataagagtggggagggtaagatt
gacttcaagaacttttcaaagatgttggtaaagatgggagttgcacccaaaaagtctagt
tag
DBGET
integrated database retrieval system
