Thalassiosira pseudonana: THAPSDRAFT_23916
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Entry
THAPSDRAFT_23916 CDS
T01078
Name
(RefSeq) predicted protein
Organism
tps
Thalassiosira pseudonana
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Gene cluster
GFIT
Motif
Pfam:
PDZ
NYD-SP28_assoc
eIF2_C
Motif
Other DBs
NCBI-GeneID:
7444991
NCBI-ProteinID:
XP_002292390
JGI:
23916
UniProt:
B8C7R8
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Position
9:complement(123389..127677)
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AA seq
1213 aa
AA seq
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MSSIFKKLFSRKSSKSEALALSGSSSFGGGSNGGGGSASYGGFGSPSNVVNNNSKQSGGF
GSILTKKKSNNNNNKPKRLSRKQKRQDKKAAFPSLPGTGKRDSSVPFSSANNNANGTYNH
GNGGDLFAEEKENSPVGGGSQGHTTTMGMRGGGGYIDHHQTMSYTKPTLSLIAEEVSSPR
NDENSNVYNGSDGNGMNGSFSSGVGGMAKSGNNGVGGHQLLSPMSGNKPPLTPNRMGRSS
NTTSNNINSGHRHHNDPSSSPISPDASLRGIHHANSPSNTSASSNDIMCLSSDADDEEYN
RIAFKGGTGAANTNGIGKGGVAAAGNNNNSGATTVTNKEGSKEEKYVSALDRSPFSYGSD
DDNALFPALVDDKDPFAQDPMMRIGNPRLKNGNAIVGMTHETHDDIRAWTPSPTKKGSSS
FTFTQGDKLLSPSAVSSSRVEQRRSAGSNNSGGGGNNSNSNVLSFENFADFEPFDPNQKQ
FGNNINNNSSSNKLSSSKSVAHNPSPVSALLEDSRARRKSSRNVSGDKVFSSSNSFHRSN
GVGGSSSINSAPVVTTSYVRSQVRSSRQNSSSISRVIDNLELHVNKRQGKTTAGSSINSN
NVNSIKDFVSEASSQHSRKSAESAIREAKERIKRENLMNNESKMIDILASGGGGAHAAAV
MNAKNGDNNWLFDEVTGTLGPRSVAADLESLGGRSNRSGKSRNSMGNKSHRSHRSRKSSS
QGHRRHRSRDIGGDVSVDSRTSRNSRASYRSYQTTKSMVSQMSEQSRSVANDLLRLEAQL
SMVGKSRQGGASVSGNSVELNKRRDDCGMTVTSRDFSLSRSSAGGLPRPNGSSKHISASA
RRAAARTLRSKVSVVAPPGKLGIILANRTDSRGTVVSGVRTSSVLAEQVSPGDRIIAIDE
EDSDAILRYVLRVGLIEYINERRYRLLQPPDRALLSNNRKVEMISNESKLVLTVGSSTTL
VAVEDLRHKRRHISNNDGKTTMKTVVAASTEEEIDYTDDAAVTNAVVHGISTGHNYEKFK
FPTHSKEQSEQLMKDAFPSLPADAAPPSELPPEQYSRLQETIKQYVCQDTIKTMEIMQEQ
LSEYHIMIDQMNALKEHCQKLHDLNSTLREECYKRDYKISALQNEAGVLRSAQLSSSTQQ
AAPVTVVMGGLTAYQLQQQQEALDAASARRRNNNRSPSPLSNSLRNRDNMEEAYILSNSY
DRLSVDDDSMGSS
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgtcatccatcttcaaaaagctcttctcccgaaagtcttccaaatctgaagcgctcgcc
ctttcaggaagcagcagcttcggcggggggagcaatggcggcggcggtagtgcgagctac
ggtggatttggtagtccctccaatgtcgtcaacaacaatagcaagcagagtggtggattc
ggatcgatcctcaccaagaaaaagtccaacaataacaacaacaaaccgaaacgtctatcg
aggaaacaaaaacgacaagataaaaaggcggcatttccatcattgccggggactggtaaa
agggacagcagcgtgccattttcttccgccaacaacaacgccaacggaacgtacaaccac
ggcaatgggggagacttatttgccgaagaaaaggaaaacagtcccgtaggaggaggaagc
caaggtcacaccactacaatgggcatgcgtggagggggagggtacatcgaccatcatcag
accatgtcgtataccaagcccactttgagtttgattgcggaggaggtgagcagcccgagg
aatgatgagaatagcaatgtttacaatggaagtgatggtaatggtatgaatggttcgttt
agttcaggtgtggggggaatggcaaagagtggcaacaatggagttggcgggcatcagttg
ctatcacccatgagtgggaacaaacctcctcttacccccaatcgcatggggcgttcttcc
aacactacttcaaacaacatcaactcgggccatcgtcatcacaatgatccttcatcctcc
cccatcagtccggatgcttctcttcgtggaattcaccatgccaattctccaagtaatact
tctgcctcgagcaatgatattatgtgtctttcgagtgatgcagatgatgaggagtacaat
cgtattgcatttaagggtggtaccggcgcagctaatactaatggaattggaaagggtgga
gttgcagcagctggtaataacaacaatagtggcgcaaccacggtcaccaacaaggagggt
agcaaggaggagaagtacgtctccgcattggatcgcagtcccttcagctacgggtcagac
gacgacaatgccctctttcctgcattggtggatgacaaggatccattcgctcaagatccc
atgatgaggatcggtaacccaagattgaagaatggtaatgcaattgtcggcatgacacac
gaaactcacgatgatattcgagcatggactcccagtcctaccaagaaggggtcgtcctcc
ttcacctttactcagggggataagttgctcagtccttcggccgtatcaagttctcgtgtc
gagcagaggaggagtgctggtagcaataacagtggtggggggggcaacaacagcaatagt
aatgttctctcgtttgagaactttgccgactttgaaccatttgatccaaatcagaagcag
tttgggaacaacatcaacaacaacagctcttctaataagttgtcatcttccaagtcggtg
gctcacaatccctctccggtttcggcactgttggaagactcacgtgctagaagaaagtca
agtaggaatgttagcggtgataaagtcttcagctcgagtaactctttccatcgttcaaat
ggagtcggcggatcatcttccatcaactctgcaccggtcgtgactacttcctacgttcgt
agtcaagttcgaagctctcgtcagaatagttcttccatctcacgtgtcattgacaacctc
gagttgcacgtgaacaaacgtcaaggaaagactaccgccggaagcagtatcaacagcaac
aacgtcaactccatcaaagactttgtctccgaggcctcctcccaacactctcgtaagagt
gccgaaagtgccatccgcgaggccaaggagcgtatcaaacgtgagaacttgatgaacaac
gagtcaaagatgattgatatcttggcgagtggggggggaggtgcccatgccgcagctgtg
atgaatgccaagaatggagataataactggttgtttgatgaggttacgggtactttagga
ccgaggtctgtggctgctgatttggaatcgttgggtggacgttctaatcgctcaggaaaa
tcacgtaactccatggggaacaagagccatcgttcccatcgttctcgcaagtcatcctcg
caaggacatcgtcgtcatcgctctcgtgatattggaggggatgtttcggttgacagtcgt
accagtcgtaacagccgcgcaagttaccgatcgtatcaaactaccaagtcaatggtatcc
caaatgtcggaacaaagccgcagtgtcgccaacgatttgctacgtctcgaagctcagttg
agcatggtcggcaaatctcgtcaagggggagccagcgttagtggaaactctgtggaattg
aacaaacgtcgcgacgactgtggaatgacagtaacctcccgtgatttctccctctctcgt
tccagtgcggggggattgccccgtcccaatggatcaagcaaacatatctctgcctcggct
cgtcgtgcagcggctcgtacactccgttccaaggtatcggtagtggctcccccgggcaaa
cttggaatcattcttgccaatcgtaccgactcgagggggacggtggtgtcgggagtgcga
acttccagtgtgttggcggagcaggtgtcgcctggtgatcgtataattgcgattgatgag
gaggattcggatgccattcttcgttatgttttacgtgtggggttgatagagtacatcaat
gaaagacgttatagattgttgcaaccacccgacagggctctcctcagcaacaaccgtaag
gttgaaatgataagtaatgaaagtaagcttgtactaaccgttggctcgtctaccaccctc
gtcgcagttgaagatcttcgacacaagcgccgccacatctccaacaacgacggcaaaacg
accatgaagaccgtcgtcgccgcctcgaccgaggaagagatcgactacaccgacgacgcc
gcagtaaccaacgcagtcgtccatggcatctccacaggacacaattacgaaaagttcaag
ttcccaacacactctaaagaacaatcggagcaattaatgaaggacgccttcccctccctt
cccgctgatgccgcccccccctccgaactgcctcccgagcaatattccagattgcaagag
acaatcaagcagtatgtatgtcaagacactatcaagacgatggagataatgcaggaacag
ctatcagaatatcatatcatgatcgatcagatgaatgcactcaaggaacattgtcagaag
ttgcatgatctgaattcaacgctgagggaggagtgctataaacgagactacaagatatct
gccttgcaaaacgaggcgggagtattgaggagcgctcaactctctagtagtactcaacaa
gcagctcccgttaccgttgtaatggggggattgacagcttatcagctccagcaacagcaa
gaagcactggatgctgcttcggccaggcgaaggaacaataatagaagtccatcgccattg
agcaatagtttgaggaatcgagataatatggaggaggcgtatattttgtctaatagttat
gatagattaagtgttgatgatgatagtatgggatcatcttga
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integrated database retrieval system