KEGG   Thalassiosira pseudonana: THAPSDRAFT_23916
Entry
THAPSDRAFT_23916  CDS       T01078                                 
Name
(RefSeq) predicted protein
Organism
tps  Thalassiosira pseudonana
SSDB
Motif
Pfam: PDZ NYD-SP28_assoc eIF2_C
Other DBs
NCBI-GeneID: 7444991
NCBI-ProteinID: XP_002292390
JGI: 23916
UniProt: B8C7R8
LinkDB
Position
9:complement(123389..127677)
AA seq 1213 aa
MSSIFKKLFSRKSSKSEALALSGSSSFGGGSNGGGGSASYGGFGSPSNVVNNNSKQSGGF
GSILTKKKSNNNNNKPKRLSRKQKRQDKKAAFPSLPGTGKRDSSVPFSSANNNANGTYNH
GNGGDLFAEEKENSPVGGGSQGHTTTMGMRGGGGYIDHHQTMSYTKPTLSLIAEEVSSPR
NDENSNVYNGSDGNGMNGSFSSGVGGMAKSGNNGVGGHQLLSPMSGNKPPLTPNRMGRSS
NTTSNNINSGHRHHNDPSSSPISPDASLRGIHHANSPSNTSASSNDIMCLSSDADDEEYN
RIAFKGGTGAANTNGIGKGGVAAAGNNNNSGATTVTNKEGSKEEKYVSALDRSPFSYGSD
DDNALFPALVDDKDPFAQDPMMRIGNPRLKNGNAIVGMTHETHDDIRAWTPSPTKKGSSS
FTFTQGDKLLSPSAVSSSRVEQRRSAGSNNSGGGGNNSNSNVLSFENFADFEPFDPNQKQ
FGNNINNNSSSNKLSSSKSVAHNPSPVSALLEDSRARRKSSRNVSGDKVFSSSNSFHRSN
GVGGSSSINSAPVVTTSYVRSQVRSSRQNSSSISRVIDNLELHVNKRQGKTTAGSSINSN
NVNSIKDFVSEASSQHSRKSAESAIREAKERIKRENLMNNESKMIDILASGGGGAHAAAV
MNAKNGDNNWLFDEVTGTLGPRSVAADLESLGGRSNRSGKSRNSMGNKSHRSHRSRKSSS
QGHRRHRSRDIGGDVSVDSRTSRNSRASYRSYQTTKSMVSQMSEQSRSVANDLLRLEAQL
SMVGKSRQGGASVSGNSVELNKRRDDCGMTVTSRDFSLSRSSAGGLPRPNGSSKHISASA
RRAAARTLRSKVSVVAPPGKLGIILANRTDSRGTVVSGVRTSSVLAEQVSPGDRIIAIDE
EDSDAILRYVLRVGLIEYINERRYRLLQPPDRALLSNNRKVEMISNESKLVLTVGSSTTL
VAVEDLRHKRRHISNNDGKTTMKTVVAASTEEEIDYTDDAAVTNAVVHGISTGHNYEKFK
FPTHSKEQSEQLMKDAFPSLPADAAPPSELPPEQYSRLQETIKQYVCQDTIKTMEIMQEQ
LSEYHIMIDQMNALKEHCQKLHDLNSTLREECYKRDYKISALQNEAGVLRSAQLSSSTQQ
AAPVTVVMGGLTAYQLQQQQEALDAASARRRNNNRSPSPLSNSLRNRDNMEEAYILSNSY
DRLSVDDDSMGSS
NT seq 3642 nt   +upstreamnt  +downstreamnt
atgtcatccatcttcaaaaagctcttctcccgaaagtcttccaaatctgaagcgctcgcc
ctttcaggaagcagcagcttcggcggggggagcaatggcggcggcggtagtgcgagctac
ggtggatttggtagtccctccaatgtcgtcaacaacaatagcaagcagagtggtggattc
ggatcgatcctcaccaagaaaaagtccaacaataacaacaacaaaccgaaacgtctatcg
aggaaacaaaaacgacaagataaaaaggcggcatttccatcattgccggggactggtaaa
agggacagcagcgtgccattttcttccgccaacaacaacgccaacggaacgtacaaccac
ggcaatgggggagacttatttgccgaagaaaaggaaaacagtcccgtaggaggaggaagc
caaggtcacaccactacaatgggcatgcgtggagggggagggtacatcgaccatcatcag
accatgtcgtataccaagcccactttgagtttgattgcggaggaggtgagcagcccgagg
aatgatgagaatagcaatgtttacaatggaagtgatggtaatggtatgaatggttcgttt
agttcaggtgtggggggaatggcaaagagtggcaacaatggagttggcgggcatcagttg
ctatcacccatgagtgggaacaaacctcctcttacccccaatcgcatggggcgttcttcc
aacactacttcaaacaacatcaactcgggccatcgtcatcacaatgatccttcatcctcc
cccatcagtccggatgcttctcttcgtggaattcaccatgccaattctccaagtaatact
tctgcctcgagcaatgatattatgtgtctttcgagtgatgcagatgatgaggagtacaat
cgtattgcatttaagggtggtaccggcgcagctaatactaatggaattggaaagggtgga
gttgcagcagctggtaataacaacaatagtggcgcaaccacggtcaccaacaaggagggt
agcaaggaggagaagtacgtctccgcattggatcgcagtcccttcagctacgggtcagac
gacgacaatgccctctttcctgcattggtggatgacaaggatccattcgctcaagatccc
atgatgaggatcggtaacccaagattgaagaatggtaatgcaattgtcggcatgacacac
gaaactcacgatgatattcgagcatggactcccagtcctaccaagaaggggtcgtcctcc
ttcacctttactcagggggataagttgctcagtccttcggccgtatcaagttctcgtgtc
gagcagaggaggagtgctggtagcaataacagtggtggggggggcaacaacagcaatagt
aatgttctctcgtttgagaactttgccgactttgaaccatttgatccaaatcagaagcag
tttgggaacaacatcaacaacaacagctcttctaataagttgtcatcttccaagtcggtg
gctcacaatccctctccggtttcggcactgttggaagactcacgtgctagaagaaagtca
agtaggaatgttagcggtgataaagtcttcagctcgagtaactctttccatcgttcaaat
ggagtcggcggatcatcttccatcaactctgcaccggtcgtgactacttcctacgttcgt
agtcaagttcgaagctctcgtcagaatagttcttccatctcacgtgtcattgacaacctc
gagttgcacgtgaacaaacgtcaaggaaagactaccgccggaagcagtatcaacagcaac
aacgtcaactccatcaaagactttgtctccgaggcctcctcccaacactctcgtaagagt
gccgaaagtgccatccgcgaggccaaggagcgtatcaaacgtgagaacttgatgaacaac
gagtcaaagatgattgatatcttggcgagtggggggggaggtgcccatgccgcagctgtg
atgaatgccaagaatggagataataactggttgtttgatgaggttacgggtactttagga
ccgaggtctgtggctgctgatttggaatcgttgggtggacgttctaatcgctcaggaaaa
tcacgtaactccatggggaacaagagccatcgttcccatcgttctcgcaagtcatcctcg
caaggacatcgtcgtcatcgctctcgtgatattggaggggatgtttcggttgacagtcgt
accagtcgtaacagccgcgcaagttaccgatcgtatcaaactaccaagtcaatggtatcc
caaatgtcggaacaaagccgcagtgtcgccaacgatttgctacgtctcgaagctcagttg
agcatggtcggcaaatctcgtcaagggggagccagcgttagtggaaactctgtggaattg
aacaaacgtcgcgacgactgtggaatgacagtaacctcccgtgatttctccctctctcgt
tccagtgcggggggattgccccgtcccaatggatcaagcaaacatatctctgcctcggct
cgtcgtgcagcggctcgtacactccgttccaaggtatcggtagtggctcccccgggcaaa
cttggaatcattcttgccaatcgtaccgactcgagggggacggtggtgtcgggagtgcga
acttccagtgtgttggcggagcaggtgtcgcctggtgatcgtataattgcgattgatgag
gaggattcggatgccattcttcgttatgttttacgtgtggggttgatagagtacatcaat
gaaagacgttatagattgttgcaaccacccgacagggctctcctcagcaacaaccgtaag
gttgaaatgataagtaatgaaagtaagcttgtactaaccgttggctcgtctaccaccctc
gtcgcagttgaagatcttcgacacaagcgccgccacatctccaacaacgacggcaaaacg
accatgaagaccgtcgtcgccgcctcgaccgaggaagagatcgactacaccgacgacgcc
gcagtaaccaacgcagtcgtccatggcatctccacaggacacaattacgaaaagttcaag
ttcccaacacactctaaagaacaatcggagcaattaatgaaggacgccttcccctccctt
cccgctgatgccgcccccccctccgaactgcctcccgagcaatattccagattgcaagag
acaatcaagcagtatgtatgtcaagacactatcaagacgatggagataatgcaggaacag
ctatcagaatatcatatcatgatcgatcagatgaatgcactcaaggaacattgtcagaag
ttgcatgatctgaattcaacgctgagggaggagtgctataaacgagactacaagatatct
gccttgcaaaacgaggcgggagtattgaggagcgctcaactctctagtagtactcaacaa
gcagctcccgttaccgttgtaatggggggattgacagcttatcagctccagcaacagcaa
gaagcactggatgctgcttcggccaggcgaaggaacaataatagaagtccatcgccattg
agcaatagtttgaggaatcgagataatatggaggaggcgtatattttgtctaatagttat
gatagattaagtgttgatgatgatagtatgggatcatcttga

DBGET integrated database retrieval system