Thalassiosira pseudonana: THAPSDRAFT_25476
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Entry
THAPSDRAFT_25476 CDS
T01078
Name
(RefSeq) predicted protein
Organism
tps
Thalassiosira pseudonana
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OTU
Motif
Other DBs
NCBI-GeneID:
7446296
NCBI-ProteinID:
XP_002296940
JGI:
25476
UniProt:
B8LD83
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Position
19
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AA seq
1054 aa
AA seq
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MSGSTTTTKKPTKSYSFHEEHHVVNRPSTSYSFHEEGRRNGSSANQHHPRPHRRYVQESS
SDGDDKPERVVPRPPSRKYIQQSSDESSSPVPVPKKQLVTTSPPTVLSAKATSSAENTSS
EALKNAQVTIEKYKQLYEAILRDPSNAFLFEKKDTLATVASEEAVAKKEGGEVKEIAKDR
VVVHGADPPEVKEVDTTIQEKKDPPATNTSELSEWNSNVNVDEIIEGLKLQDILNPQETP
SVGSQSILSEIKNSSSSSSSSKNDRQLAPIKPNKRRISSSLNSSLRNSHKSASSTDSHHS
HRSHSKSERKRSNRSLQDHHYDRERTSSTTKNEERRSRSSFNLTRSASPGNVSSGTSVSS
QKSNKSRSSSTGRNLSFGSRRRFSFSSNAGGSVADDLESQGGFTDCEDDGDVVGDLYNAS
GTDAKKGKKGLFGKMRKLGAKVSNGVSKVFLPGGSMFRKYKVGEKARYNIGKIRDSLETF
DPCDLTVEVTIIAVHIDAVLEIPYYTIQLPDGSRKQTNMEHLMPLEDYNNGRRAESRLGH
HRHRSSSRSRSTSRSRSSLVDNDDDQTSVRSNRSTRSTNSSKSLSSRRSSSKRGSSRRSP
SPERDSSRRRSISKRHSSKPRDRDRSGSPKRSSSRHSSSRRLSEHSSSFKSTSSSSSRHR
MKTPPRSRNGGCSSRCGSDKLSSTRRSSRRCIDEHNDSDYRPRIDAMRGGGMTIPSSDSV
VSLKKSDRTVKSKDPQRANDETEEKPTIIKLTRSNTGNSMASSSFALEAAALAIGARRSS
ASVSSGTKGNESAKEEPPAVMESMLPKAKHSKSSSSDDYELVKSRDKSKRTRSRSIGAPA
SPVKNCSKCDGSHESSDCPTYLQEREKHKDAWRHYGKKDKKHMGEDGGNVRVKAKRITQP
PDGSCLFHSLVHCLNTSKECGGVTPLSSFSNTASSYVPPPLTATYLRRKVASYIASNPEL
PIADDPLKEWVLWESGKSVKEYAAEIKKDGVWGGGVEIAAVSHMFNVNVHVYERKKSSDE
YLRISCFNVDSDVSKKTLHILYQGRNHYDALQLK
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggaagtactacgacgacgaagaagccgacgaaatcgtatagctttcacgaagaa
catcatgtggtgaacaggccgagtacatcatacagctttcatgaggaagggcgaagaaac
ggtagctctgccaatcaacatcatcccagaccacatcgacgatatgtccaagagtcatcg
tcagatggggacgacaagccagaacgagtggtgcctcgtcctccttctagaaagtacatt
caacagtcatcggatgaatcgtcttctcctgttccagtaccaaagaaacagctcgttaca
acatcaccaccaacagtactatcagctaaagcaacatcgtctgctgaaaacacatccagc
gaagcactaaagaatgcacaagtgacgattgaaaaatataaacagctgtatgaggctatt
ttgagggacccttctaatgcattcttgtttgagaagaaagatactctggccaccgtggca
agtgaggaggcagttgcgaagaaggagggtggagaagtcaaggagattgcaaaggatcgt
gttgttgttcacggagctgatcctccagaggttaaagaggtggatactactatccaagaa
aagaaggatcctcctgcaaccaacacctcagagctcagcgaatggaacagcaacgtcaac
gttgacgaaatcattgaaggtctcaaactccaagatattctcaatcctcaagagactcct
tcagtaggctcacagtccatcctctcagagatcaaaaatagctcttcgtcctcctccagc
agcaagaacgaccgtcaacttgctcctatcaaaccaaataaaagacgaatcagctcttct
ctcaatagcagtttgagaaacagtcacaagtctgcttcatccactgactcgcaccattct
catcgttctcattccaagtccgagaggaaacgctccaatagatctctacaggaccatcac
tacgatagagaacgtacgtcgtcgaccaccaagaatgaggaacgtcgctcacgcagttca
ttcaatctcacccgatcagcctcaccaggcaatgtctcttcaggtacatcagtctcttca
caaaagtcaaacaagagtcgcagcagtagtaccggacgaaacttgtcatttggaagccgt
cgtagattctcattcagttccaatgctggaggaagcgtagctgacgatttggagtctcaa
ggagggtttactgattgtgaagacgatggtgatgtcgtgggtgatttgtacaatgcttct
ggtacggatgccaagaagggaaagaagggactgtttggtaagatgaggaagttaggtgcc
aaggtatcgaatggagttagcaaggtgttcttaccgggaggttcaatgtttaggaagtac
aaggtgggagaaaaggcgaggtataacattggaaagattagggactctttagagacgttt
gatccttgcgatcttaccgtggaagtgactatcattgctgttcatattgatgccgtgcta
gaaattccttattacaccatccaattaccagacggcagcaggaaacaaacgaacatggaa
cacctgatgcctcttgaagactacaacaatggacgtcgtgccgaaagccgtttgggtcat
catcgccaccggtcttcgtcaagaagtcgtagcacatcaaggagccgatcttctcttgtc
gataatgatgacgatcaaaccagcgttaggtcgaatcgatccactcgttcaacaaactca
tccaaatccttgtcatcacgaagatcttcctctaaacgaggtagcagcaggcgtagccca
agccccgagagagatagttctcgtcgtagatccatttccaagcgtcactcatcaaagcca
agagatagagatcgctctggttctccaaagaggtcgtctagccgccactcatcgtctcgt
cgtcttagtgagcattcctcttccttcaagtctacatcttcgtcttcatctcgccatcgt
atgaagactcctcctcggtctcgcaacggcggatgttcatctcggtgtggttctgacaag
ctatcttctacacgtcgcagtagccgtcgatgtatagacgaacataatgattctgattat
cgcccaaggattgatgcaatgcgaggaggtggtatgactattccttcgtcagatagtgtt
gttagcctcaagaagagtgataggactgtgaaatcaaaggatccacaacgtgccaacgat
gagacagaggagaaacctacgattatcaagctcactcggtctaataccggtaacagcatg
gctagctcctcatttgctttggaggcagcagccttggcaataggtgcacgtcgatcttct
gcatctgtttcttccggtacgaagggtaacgagtcagcgaaagaagagccgccagctgtg
atggagtcgatgctaccaaaagcgaagcactccaaatcttcctcatcggatgattatgaa
ttggtaaagtcacgcgacaagtcaaaacgtactcgcagtcgatctattggtgctccagca
tcaccggtgaagaattgcagtaagtgcgacggtagccacgaatcgtcagattgtccaacg
tatctccaagaacgcgagaagcacaaagatgcatggagacattacggcaagaaggataag
aaacatatgggagaagacggaggcaacgttcgtgtgaaggccaaacgtatcactcagcct
cccgatggtagctgtttgttccattctctcgtgcattgtctcaatacttcaaaggagtgt
ggcggagtaactccactatcgtcgttttcaaatacggcatcatcatatgttcctccaccg
ctaacggcaacatatctcaggaggaaagtcgcatcgtacattgcttccaatcctgaactt
ccaatcgccgatgatccattgaaggagtgggtcctctgggaaagtggcaagtcagtaaag
gagtacgcagcagagattaagaaagatggggtttggggcggaggagtggagattgcagca
gtctctcacatgttcaatgtcaatgtacacgtgtacgagaggaagaagtcgtctgacgaa
tacttgaggatttcatgcttcaacgttgattcagacgtgtcaaagaagacactacacatc
ttgtatcaaggacgcaaccattacgatgctttgcagttgaaatga
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