Thalassiosira pseudonana: THAPSDRAFT_25837
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Entry
THAPSDRAFT_25837 CDS
T01078
Name
(RefSeq) predicted protein
Organism
tps
Thalassiosira pseudonana
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EcKL
APH
DUF1679
Choline_kinase
ABC1
Motif
Other DBs
NCBI-GeneID:
7442643
NCBI-ProteinID:
XP_002295147
JGI:
25837
UniProt:
B8CG92
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Position
23:194741..197373
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AA seq
642 aa
AA seq
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METTNEDEDAPFMTSWDDAFIVTTRLQSALSSRGVSTPIASSTVSPLEGSGLSGDLSLLT
LDTNKYVLKRTRAGVDAKKYSKRLGLQREGAFYETIGPWIQVRLDMIPTTSQSVHTFIPK
ALYAEHSDITGQKAIVLEYYDNATEAGRYFPHSVLTKNAMEYDGKINAKTITLEATRMAA
SFHGTFYLSPALLSSDLITPHLRMANWIQGKDKESFIASQSEVAGRWKRCKARWEKGSYY
GGEVKLEKEFVDVMDKSCDEALDFDKFVSKWSVEKDGDGTAKQSTIDWSLVHGDFHPGNM
LCLNNSSTNKPQLILIDWEVVGVGSGPQDIGQFLISHLEPSEAYDMIDEVTAVYRKSLLE
TLEAVNSKDNTNTAPTVVPTVKQMKHEIIFGGIERWVWLFGYMCDLEESMPSLYMQYFHD
QMHGWIRMSVCLVLEEETGGWMEIGADRWSMSHDLITRKYPRCIATISAGFEKGDFLVRE
EKGQRVYFDFFEEAFNYIAAKGYARMPKGEEAEWMDLMGWRVMKWRGNYSLCLDFGISTG
HAPFHELLGWICYLDVKRNRVGLFAFEIVVICRELCHLQNLDLEESIHASVKGGMKYNTG
RLLMVLHKPLIPHKGEDYDESMRGGRGYEEPDMENNAMLPMP
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggaaacaaccaacgaagacgaagatgcaccattcatgacctcatgggacgacgccttc
attgttacaacacgtcttcaatccgccctctcctctcgtggcgtatccactcccatcgca
tccagtaccgtctctccactggaaggaagtggcctctctggcgatctatcacttcttacg
ttggataccaacaagtatgtgctgaaacgtacgagagcaggggtcgatgcaaagaagtat
tcgaaaagattgggattgcaaagagagggtgcgttttacgagacgataggtccgtggata
caagtgcgtttggatatgattcctacaacatcacaatcagtacacacctttataccgaaa
gcactctatgccgagcacagcgatatcacgggccagaaggcaatagtgttagagtactac
gacaacgctacagaagcggggagatactttcctcattcagttctgacaaaaaatgctatg
gagtacgatggaaaaattaacgcaaaaacaatcacgctcgaggcgacacggatggcggct
tccttccatgggacattctacctctcgcctgccctcctatcaagcgacctcatcacccct
cacttacgaatggcaaattggattcaaggaaaggataaagagtcattcatcgcttctcaa
tctgaagtggcggggaggtggaagaggtgcaaagcgaggtgggaaaagggaagttactat
ggaggagaagtaaagctggagaaggagtttgtggatgttatggataagagctgcgatgaa
gcgttagactttgacaaatttgtttccaagtggagtgttgagaaggatggcgatggcact
gcaaaacaatctacaattgactggtcattggtgcacggcgactttcaccctggcaacatg
ctttgtcttaacaattccagcaccaacaaacctcagttaatcctcatcgactgggaagta
gtcggcgtaggaagcggtccacaggatatcggtcagtttctcatctctcatctcgaaccc
tctgaagcatatgacatgattgatgaagtcactgcagtttatcgcaaatcgttgcttgaa
actcttgaggcagtcaactccaaagacaacaccaacaccgcaccaactgtcgtaccaaca
gtcaaacaaatgaaacacgagatcattttcggaggaattgagcgatgggtatggcttttt
ggatacatgtgtgacttggaagagagcatgccttcgttgtacatgcagtactttcatgat
cagatgcatggctggattagaatgtcggtatgcctcgtccttgaggaggaaacaggaggc
tggatggagattggagcggatcgttggagcatgtctcacgacctaatcacccgcaaatac
ccacgatgcatcgccacaattagcgctggctttgagaagggcgattttctagttcgagaa
gagaagggccaacgtgtctatttcgactttttcgaggaggccttcaactacatagcggcc
aagggatatgcgaggatgcccaagggagaggaggctgagtggatggatttgatggggtgg
cgtgttatgaaatggcgtggaaattacagtttatgtcttgattttggtatctctactggt
catgctccgtttcacgaattgctgggttggatttgctaccttgatgttaaaagaaatcgg
gttggattatttgcatttgagatcgtggttatttgcagagaattgtgtcatttgcaaaat
ttggatctcgaggagtcaatccacgcaagtgtcaaaggggggatgaaatacaacactggt
cgtttgttgatggtgttgcacaaacctctcatcccccacaagggagaggattacgatgaa
tctatgcgcggtggaagaggatatgaggagccagatatggagaacaatgcaatgcttccc
atgccttag
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