Thalassiosira pseudonana: THAPSDRAFT_269718
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Entry
THAPSDRAFT_269718 CDS
T01078
Name
(RefSeq) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
tps
Thalassiosira pseudonana
Pathway
tps00020
Citrate cycle (TCA cycle)
tps00785
Lipoic acid metabolism
tps01100
Metabolic pathways
tps01110
Biosynthesis of secondary metabolites
tps01200
Carbon metabolism
tps01210
2-Oxocarboxylic acid metabolism
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
THAPSDRAFT_269718
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
THAPSDRAFT_269718
Enzymes [BR:
tps01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
THAPSDRAFT_269718
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Gene cluster
GFIT
Motif
Pfam:
E1_dh
Transket_pyr
OxoGdeHyase_C
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-GeneID:
7450803
NCBI-ProteinID:
XP_002293467
JGI:
269718
UniProt:
B8CBX3
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All DBs
Position
13:999632..1003616
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AA seq
1015 aa
AA seq
DB search
MRLSHGSGRHSSSNYISHHGNNSSIIRHLSTHPSKNDSFLSASSSLYIESMLERYEQDPD
SVPESWRTYFEMGAADASTSSSGEEAMFNQPTIVLSTHLIRAYQVNGHRSANLDPLGLHT
NESFPSHDGFAATLNVGFHGFDPNKDMDRELNFKGVHTGGNKGFLEDLTSMPGKVTLRKV
LDRLRQTYCGTIGVEYMHIGSTEQCNWIRERVEHPSFLQCDREKKIHIYERLCFADTFEN
YMAHKFNTTKRFGLDGGEAIVPALKDAIDRASELGAHSFIIGMPHRGRLNVLANVMRKPM
TTIFSEFQGTHYEMGYYTKMKEDWGSSGDVKYHLGSSMDRTYPDGRKIHLSLVANPSHLE
CVNPVVLGKARAKQFYCGDSDEDMRNVVPILLHGDAAFAGQGVVYETMQMMGVDDFKVGG
TLHVIVNNQIGFTTNPINSRSTPYASDLGKAFNCPIFHCNGDDPVAVSRALETAVEWRHE
WGTDVVIDMICYRRNGHNELDQPMFTQPKLYKAITRHPSTLEIFEKKLIEEGTMSKEEVE
EIRAFTLQSYETDYEASKTYKPKPEDWLSSKWSGFKSPRQHSRIRPTGVDIDTLRYIGNK
AGEVPEGFKIHRQMNKIFKARQTMAQEGTEIDWGLAEAMAFGSLLLEGNHVRLTGQDVQR
GTFSHRHAVVKDQDTEEEYTPLNSLARILSMSAPLEELRLPDTQAKLTVRNSILSEFAVL
GFEHGYSLENPNALVLWEAQFGDFVNGAQVMLDQFIAAGEDKWLRQSGLVMLLPHGYDGQ
GAEHSSCRVERYLQMVEEDPHHIPPMGKDERNQIQKVNWQIVNCTTPANYFHCLRRQIHR
DFRKPLIVVAPKNLLRNKRCVSSLDDMGPGTIFHRTFDETDEVIKNNPENVKTLVFCTGQ
IYYELVGEREKLGRHDVAIVRLEQIAPFAFDKVALYCSKYGNAEVIWAQQEPKNMGAYSY
VLPRLMTATREINNNEKRARYVGRLVSSAPATGMSKIHLKEYRDIMEGVFGEASE
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atgagactgtcccacggcagcggcagacattcttcctccaactacatcagccaccacggc
aacaactctagcatcatccgccacttgtccacccatccatccaagaatgattccttcctg
tccgcctcctcctcgctgtacatcgagagcatgctggagcgatacgagcaagacccagac
agcgttcctgagagttggaggacctactttgagatgggagctgccgatgcttctactagt
agcagtggcgaggaggcaatgttcaatcagcccacgattgtgttgagcacccatctcatc
cgagcctaccaagtcaacggacacagatctgccaacctcgatcccctcggcttacacacc
aacgaatcattcccctcccatgatggattcgccgccactctcaacgtaggatttcacgga
tttgatccaaacaaggacatggacagggagttgaacttcaagggggttcatacgggaggc
aacaaaggtttcttggaggatttgacttccatgcctggaaaagtaaccttgcgcaaagtg
ctggatcgtctccgtcaaacgtactgtggtaccatcggcgtggagtacatgcacattgga
tccactgaacaatgcaattggattcgtgaacgtgttgagcatccctccttcttgcagtgt
gaccgggagaaaaagattcacatctacgaacgtctgtgcttcgcagacacatttgagaac
tacatggctcacaaatttaacaccaccaaacgatttggactggatgggggagaggccatt
gtgcccgcattgaaggatgctattgatcgtgcgtcggagttgggagctcacagtttcatc
attggaatgccccacaggggaaggttgaatgtcttggccaatgtcatgaggaagcccatg
accaccatcttcagtgagtttcaggggactcattatgagatgggctattacaccaagatg
aaggaggattgggggagttcgggagatgtcaagtaccatctcggatcaagcatggatcgt
acctatcccgatggacgaaagattcatctcagtctagttgccaatccctcccatctcgag
tgtgtgaatccagtggtgttggggaaagctcgggccaagcaattctactgcggtgacagt
gatgaggatatgcgtaatgtggttcctattcttctccacggagatgcagcatttgccggt
cagggggtcgtttacgaaactatgcaaatgatgggagtggatgatttcaaagtgggtgga
acgctacacgtcattgtaaacaatcagattggattcactaccaaccccatcaacagtcgg
tcgactccctacgcctcggaccttggaaaggcattcaactgccctatcttccactgcaac
ggagacgatccagtagccgtgtctcgtgctcttgagacggcggttgagtggcgtcacgaa
tggggaactgatgtcgtcattgatatgatttgctaccgtcgtaacggacacaacgagttg
gatcagcccatgttcactcagccgaagttgtacaaggccatcacgaggcatccatccacg
ttggagatcttcgagaagaagttgattgaggagggaaccatgtccaaggaggaggtggaa
gagattcgtgccttcacactccagagctacgagactgactacgaggcgagtaagacttac
aaacctaagccggaggattggctgagttccaaatggtccgggttcaaatctcctaggcag
cacagtcgtattcgtcccactggagtggacattgatactcttcgttacattggaaacaaa
gcgggtgaggtacccgaggggttcaagattcaccgtcaaatgaataagatcttcaaagct
cggcagacaatggctcaggagggcacggagattgattggggattggcagaggcaatggcg
tttggctctcttttgcttgagggcaatcacgttaggctcactggacaggatgttcagcgt
ggtacgttcagtcatcgccatgccgtggtaaaggatcaggatacggaagaggaatacact
ccattgaactctttggcaagaattttgagcatgtcggctccgttggaagagttgaggctt
cccgatacgcaggccaagttgactgttcgtaactccattttgtcggagtttgcggttctt
ggttttgagcatgggtacagtcttgagaatcccaatgcactcgttctatgggaggcacag
tttggagactttgtcaatggtgctcaggtcatgttggatcagtttatcgcagccggagag
gacaagtggcttcgtcagagtggattagttatgttgcttcctcatggatacgacggacaa
ggtgccgagcattcttcttgtcgcgttgagcgctacctccaaatggtggaggaggatcct
catcacattcctcccatgggcaaagacgagcgtaaccaaatccaaaaggtcaactggcaa
atcgtcaactgtaccactcctgcaaactacttccactgcttgaggaggcagattcatcgt
gacttccgtaagcccttgattgtagtggcaccgaagaatttgttgaggaacaagaggtgt
gtgtcttcgttggacgatatgggaccgggaaccattttccatcgaacctttgatgagact
gacgaggtcatcaagaacaatcctgagaatgtcaagacattggtcttttgcaccggacaa
atttactacgagctcgtgggtgaacgtgaaaagcttggccgtcatgatgttgctattgtt
cgtcttgaacagattgctcctttcgctttcgacaaggttgcattgtattgctcaaagtac
ggaaacgccgaggttatatgggcacagcaggagccaaagaacatgggcgcctactcctac
gttttgcctcgattgatgacggccacacgagaaatcaataacaacgaaaagcgtgctcgt
tatgttggacgattggtgtcatcggcccccgccaccggcatgagtaagattcatctaaag
gaataccgtgacatcatggagggcgtatttggagaggcgtctgagtga
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