Thalassiosira pseudonana: THAPSDRAFT_269863
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Entry
THAPSDRAFT_269863 CDS
T01078
Name
(RefSeq) metalloprotease
Organism
tps
Thalassiosira pseudonana
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_M13_N
Peptidase_M13
DEAD
Motif
Other DBs
NCBI-GeneID:
7442498
NCBI-ProteinID:
XP_002296777
JGI:
269863
UniProt:
B8LCF9
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Position
16
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AA seq
654 aa
AA seq
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MDFSVHPRDNFFYYSNGEWMKNNPIPSGYPNWNSFMSLRLKSQEDCKAILEELEQKLGAG
ESVTDEEKKVAAFYKAAMDEEKIESLGVEPLEPLLELCKETAEKKNDKSLGTMAYAYGVS
PFFGIGAGADKKNSEHSTAQVGQGGIRLPDRDYYFDEDKEDQRAAYKKCMALLLTLLDDP
AASSPTEEATASAAKVYELEKSLAEAHMTKTENRDPHDTYNKMSIDAITKLGNDEFDFGS
YFEAATAGKTTEEIGEVNLRNVKALQKVAEVASTADLDTLHAYFRWGAVASCAPYLPKAF
VDAHFDFYERTLQGTKEMKPRWKRATDWTENALGEVLGKLYCARYFDESSKERALNIVEQ
VRQALEDRLKEVEWMKSSETRENALKKMNKFGVKIGYPDKWIDYTSLVIDESQSFLSMVF
KAREFDNILEIKEMNAPTDRKKWFMTPQTVNAYYHPSLNEIVFPAAILQHPFFDKDADDA
VNFGSMGAVIGHEMTHGFDDKGRKFDWRGNMEDWWTEEDGKEYERRVEVMVEQANEYEVH
GQHVKGKLTSGENIADLGGMRLALRALLTSKGYDPSKLVDGFTPIQRFFLSWGQCWRQSI
TKERALQLITVDPHGPNEMRCNGTLSNMPEFHAAFDVKEGDPMFKSFEARVDIW
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggacttctccgttcatcctcgtgacaacttcttctactactccaacggagaatggatg
aagaacaatcctattccgagtggatatcccaattggaactcattcatgagcttgaggttg
aaatcccaggaggactgcaaggccatcttggaggagttggaacaaaagctgggggctgga
gaaagtgtgacggatgaagagaagaaggttgctgcgttttacaaggctgcaatggacgag
gagaagattgaatctttgggagttgagcctttggagccgttgttggagttgtgtaaggag
actgcggagaagaagaatgacaagagtttgggaacaatggcttacgcgtatggggtgtct
cctttctttggtattggagctggtgccgataagaagaactcagagcattccactgcacaa
gtaggtcaagggggtattcgtttacctgatcgtgactattactttgacgaagacaaagag
gatcaaagggcggcctacaagaagtgtatggctttattactcacacttctcgacgatcct
gctgcctcctcacctacggaagaagccactgctagcgctgcaaaggtgtatgagttggaa
aagtctttggccgaagcacacatgacaaagacggagaatcgcgatcctcacgacacgtac
aataaaatgagtatcgatgcaatcactaaactcggcaacgacgagtttgactttggtagt
tactttgaggcagctactgctggaaagactaccgaggagattggtgaggtaaacctacgt
aacgtcaaggcattgcagaaagtggctgaagttgcatctacagctgacctggatacgttg
catgcctactttcgttggggtgctgtagcgtcttgtgctccttaccttcccaaagcattt
gtggatgctcactttgatttctacgagcgtactttgcaaggcactaaggagatgaagcct
cgttggaaacgggcgactgactggacagaaaatgcattgggtgaggtattgggcaagtta
tattgtgcgagatactttgacgagagtagcaaggagagagctttgaacattgttgagcaa
gttaggcaggcgttggaagataggctgaaggaggtggaatggatgaagtcgtctgagacg
agggagaatgctctcaagaaaatgaacaagtttggcgtgaagatcgggtatcccgataag
tggattgattacacttctctagttattgatgagagtcaatccttcctaagcatggtgttc
aaagcgagggagttcgacaacattcttgagatcaaagagatgaatgctcctactgatagg
aagaagtggttcatgacaccacaaactgtgaacgcttactatcaccccagtctcaatgag
attgtttttcctgctgctatcctccagcatcctttctttgacaaggacgcagatgatgct
gtgaactttggtagtatgggcgcagtcattggtcacgagatgactcatgggtttgatgat
aaaggaaggaagtttgattggcgaggaaatatggaagattggtggactgaagaggatgga
aaggaatatgaacgtcgagtggaggtaatggttgagcaggctaacgaatacgaagttcat
ggacaacacgtgaaagggaagttgacatctggagagaacattgcagacctcggtggaatg
agacttgctctccgggctctcttgactagcaaaggatacgatccttcaaagttggtcgac
gggttcactccaatccagcgtttcttcttaagttgggggcaatgctggcggcagagcatc
acaaaagaaagagctttgcaactgattaccgtcgatccacatggtcctaatgagatgagg
tgcaacggaaccctcagcaatatgccagagttccacgctgcatttgacgttaaggaagga
gacccaatgtttaaatcatttgaagcaagggttgatatctggtag
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