Thalassiosira pseudonana: THAPSDRAFT_35182
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Entry
THAPSDRAFT_35182 CDS
T01078
Name
(RefSeq) set domain-containing protein
KO
K11422
[histone H3]-lysine4 N-trimethyltransferase SETD1 [EC:
2.1.1.354
]
Organism
tps
Thalassiosira pseudonana
Pathway
tps00310
Lysine degradation
tps01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
THAPSDRAFT_35182
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tps03036
]
THAPSDRAFT_35182
Enzymes [BR:
tps01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
THAPSDRAFT_35182
Chromosome and associated proteins [BR:
tps03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
THAPSDRAFT_35182
HMT complexes
COMPASS/SET1 complex
THAPSDRAFT_35182
COMPASS/SET1 complex (yeast)
THAPSDRAFT_35182
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SET
DUF1922
Motif
Other DBs
NCBI-GeneID:
7451162
NCBI-ProteinID:
XP_002291362
JGI:
35182
UniProt:
B8C597
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All DBs
Position
6:complement(435522..436091)
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AA seq
189 aa
AA seq
DB search
EKGAVTGRAVRASQRRMLKSLASLGDASKTVDRLVSRDREERLRFDKSLIHGWGVFAEEA
INAGDMIIEYRGELIGNAVADKRELEYERAKIGSDYMFRIDEFWVCDATKLGNVARFINA
SCCPNCYTKIITANETKRIVIFAKKNIQRGEELCYDYKFQMEHEKEKRIPCYCGSSECRG
FMNWVSVLV
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
gaaaagggtgcggtcactggtcgtgctgtaagagccagtcagcgacgtatgctgaagagc
cttgccagtctaggtgatgcttccaaaacggttgatcgattggttagtcgcgatcgagaa
gaacgacttcgttttgacaagagtcttattcatggctggggagtgtttgccgaagaagca
ataaacgctggtgacatgatcatcgagtaccgaggggaactcattgggaatgccgttgca
gacaaacgtgaattggaatacgaaagagctaagattggcagtgattacatgttccgaatc
gacgagttctgggtatgcgatgcaacaaagcttggtaacgtagctcgtttcatcaacgcg
agttgctgtcccaattgctacaccaagattattacagcgaatgagactaaacgcattgta
atctttgcaaagaagaacatccaacgtggtgaagagctatgctatgactataaattccag
atggaacacgagaaagagaaacggatcccttgctactgtggatcttcagagtgccgtggc
ttcatgaactgggtaagtgttttggtttga
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