Thalassiosira pseudonana: THAPSDRAFT_4709
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Entry
THAPSDRAFT_4709 CDS
T01078
Name
(RefSeq) predicted protein
Organism
tps
Thalassiosira pseudonana
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
mRNA_cap_enzyme
mRNA_triPase
DNA_ligase_A_M
DUF6778
Motif
Other DBs
NCBI-GeneID:
7443738
NCBI-ProteinID:
XP_002289909
JGI:
4709
UniProt:
B8C027
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Position
4:complement(1712789..1714993)
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AA seq
734 aa
AA seq
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MSSKRPAGALGSILSQSTQEAKRTALDRPVGTSTSTSTSTSTANNPFLSRPTQPEEAIKM
FLIQARSTARRRPPQYGGSPPPIEIEARLGTILSPFGAHDMRALSSGAKLIPIKGVNRVV
HAFVCNISGEGNSNANTTSAAKTNFEGGITRSNYLKWTNAGLSELGPLTNAFSIKHKNPN
ESESAAIKFQLAEVESVETVFCYPNSTRINFPHNPPQSNVLTKGHQEKKEKLSVIDIALP
AAPYDLRLQLATEVPMGEGNNIPNVKSIPHGWNKKRVKRRRSYSRLDNSFAWKIDVTEVT
STDAPAAGGASAAAASMKGSGQHADIGYEVEMELSSSMTQKLIQTQDEAAARKLAETLAQ
QLWFMMQQINPTHDVLEVDDFLHPHPDNEAVKLAIGQCGTIKRFMDSGCQSWRSAIAPEG
GMMEQGGECKPPRSFIGCMPVNFSRHNIEEVQRSDGDDNGGSNGSAGYYLSEKTDGVRYL
LVFTGKTAVLVDRASHETKKAFQPNPRGKPSGEDDDPFSNILLAVKPGAILDGEVVVHRK
LRRPIFIVFDVLANSASEPILQLPFEQRLRHLKAASFVKSGVGIDVFKSSAVTDPNIPLP
LVRKNFVKRVELDQLLSYVVEEKDMRIYKYGETHHHLTDGIIFQPNMPYVCGTDVNLLKW
KYIDTVTIDVEILPPRPNFGRNQRNDDDDVLRVGVMGEEGTTVDMTRYLRLPSSERHRLE
ADRHENGSKIAEVG
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccaaacgacccgccggtgccctaggcagcatcctcagccaatccacccaagaa
gccaaacgcaccgctctcgatcgtcccgtcggcacctctacatcaacttccacttccaca
tccaccgccaacaacccctttctctctcgtccaacccaaccagaagaggcgattaaaatg
ttcttaatccaagctcgttcaacggcacgtagacgtcctccgcagtatggaggatctcct
cctccaattgagattgaggctagactgggcactatcctctcaccatttggtgcacatgac
atgagagctttgtcgtcgggtgccaaactcatacccatcaagggtgtcaatcgcgtagtt
cacgcatttgtatgcaacatttctggagaaggcaacagcaacgccaacactacctcggca
gcaaagacaaactttgaagggggcatcactcgttccaactacctcaagtggacgaacgca
ggtctgtcggagttaggacccctcaccaatgccttttccatcaagcataagaacccaaac
gaaagcgaaagtgccgccatcaaatttcaattggccgaggtggaaagcgttgaaactgta
ttctgctatccaaactctactcgtatcaactttcctcataatccaccacagtccaacgtt
ctaaccaaaggtcatcaagagaagaaggagaaactgtcggttattgacattgctctcccc
gcggctccgtatgatttacgtctacagctagctacggaagtgccaatgggggagggaaac
aatattccaaatgtaaaaagtataccacacggttggaataagaagagagtcaagaggagg
aggagttacagccgtttggataacagttttgcttggaagatagatgttacggaggtaacg
tccacggatgctcctgctgcgggaggtgcttccgctgcagcagcatcgatgaaggggtcg
ggacagcatgccgatattggctacgaggtggagatggagctgtcttcttccatgacgcaa
aagttgattcaaacacaagacgaggcagcggctcgaaagttggctgagacattggcacag
caattgtggttcatgatgcaacaaatcaatcctacccatgatgtgttggaggttgacgac
ttcttacacccacatccggataacgaggctgtgaaactagccattggacaatgtggtacg
atcaagcggtttatggatagcgggtgtcagagctggaggtcggcaattgctccggaggga
ggaatgatggagcagggaggggagtgtaagcctcctcggagtttcattggatgtatgccc
gtgaacttttcgagacacaatattgaagaagtacagaggagtgatggtgatgataacggc
ggaagcaatggcagtgctgggtattacttgagcgaaaagactgacggtgtacgttatctg
cttgtgtttactggaaagactgcagttttggtggatagggcgagtcatgagaccaagaaa
gcatttcagcctaatcctcgtgggaagccgtccggagaagacgacgatccattcagcaat
atactgctggcagtcaagcctggagctattcttgacggagaagtggttgtccatcgcaaa
ctacgccgtcccatcttcatcgtgtttgatgtgttggccaactctgcatccgaaccaatc
ttacaactcccattcgaacaacgattacgtcatctgaaggcagcatcctttgtcaaaagt
ggtgtcggcattgatgtgttcaaatcgtctgcggtgactgatcccaatatcccattgcca
ttggtgaggaagaactttgtcaagagagtagaactagatcagctgctttcctatgtggtc
gaggagaaagacatgagaatttacaaatacggagagactcatcatcacttgacagatggt
attatctttcaacccaacatgccctacgtgtgtgggactgacgtcaatctattgaaatgg
aagtacattgatacggtgaccattgacgttgagattcttcctcccagacccaactttggt
cgcaatcaacgcaatgacgatgacgacgtattgcgtgttggcgtgatgggagaggaagga
acgactgttgacatgacacgttatcttcgtttaccatcgagtgaacgacatcgcctggag
gctgatcgccacgagaacggctcgaagattgccgaagtggggtaa
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