Thalassiosira pseudonana: THAPSDRAFT_508
Help
Entry
THAPSDRAFT_508 CDS
T01078
Name
(RefSeq) hypothetical protein
KO
K11131
H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
Organism
tps
Thalassiosira pseudonana
Pathway
tps03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
THAPSDRAFT_508
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tps03009
]
THAPSDRAFT_508
03032 DNA replication proteins [BR:
tps03032
]
THAPSDRAFT_508
Ribosome biogenesis [BR:
tps03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
THAPSDRAFT_508
Prokaryotic type
THAPSDRAFT_508
DNA replication proteins [BR:
tps03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
Dyskerin complex
THAPSDRAFT_508
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DKCLD
TruB_C_2
TruB_N
PUA
UPF0113
Pus10_C
Motif
Other DBs
NCBI-GeneID:
7448418
NCBI-ProteinID:
XP_002291351
JGI:
508
UniProt:
B8C572
LinkDB
All DBs
Position
6:complement(377096..378472)
Genome browser
AA seq
458 aa
AA seq
DB search
MIAPSSHTPKLDTSAWPLLLKNYSDLHIRTSHYTPIPCGSSPLARNLKDHISSGVINLDK
PANPSSHEVVSWIKRILRVEKTGHSGTLDPKVTGCLIVCIDRATRLVKAQQSAGKEYVGV
VRLHSALEDTKQLHRAVETLTGALFQRPPLISAVKRQLRIRTIYESKLIEYDEKRNLGIF
WVSCEAGTYVRTLCVHLGLLVGTGGHMQELRRVRSGVLDENDNLVTMHDVMDAQHVYDTT
KDEKYLRRVVMPLETLLTNYKRIVVKDSAVNAICYGAKLMIPGLLRFADDIDINQEVVLM
TTKGEAIAVGIAQMTTAVMATCDHGVVAKIKRVIMERDTYPRRWGLGPMAQRKKGLIKEG
KLDKHGKPNEKTPKDFLEGYKSVEGAAKAPTLGGANGGSTTTPAKIKSEEAKPDSPTAMD
EDSNSGDEPKSSKKDKKKKKEGKTPKKEKKSKKSKSKE
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgattgcaccctcctcccacacccccaaactggacacctccgcctggcccctcctcctc
aaaaactactcggatctccacattcgtacttctcactacactcccatcccgtgcggttcg
tcccctctcgctaggaatttgaaggatcatatttccagcggggtgatcaacctcgacaag
cctgccaatccttccagtcacgaggtagtctcgtggatcaaacgtattcttcgcgtagag
aagacgggacattcgggaacgctcgatcccaaagtcacgggatgtctcattgtgtgcatc
gatcgcgccactcgtctcgtcaaggctcagcagagtgcggggaaggagtacgtcggggtg
gtgcgtcttcattccgcgttggaggatacgaaacagctccatcgagcggtggagactttg
acgggggcgttgtttcagcgccccccgctcatttcggcggtgaagcgtcaactccgtatt
aggacgatatacgagagcaagttgattgagtatgatgagaaacgtaacttgggtatcttt
tgggtgtcatgtgaggcggggacgtatgttcgtacgctctgtgttcatttggggttgttg
gttggtactgggggacatatgcaggagttgcgacgtgtgaggagtggtgtgttggatgag
aatgataatttggtaacgatgcatgatgtgatggatgcgcagcatgtgtatgataccacc
aaggatgagaaatatttgaggagggttgtcatgcctttggagaccttgttgacgaactac
aagaggattgtggtgaaggactcggcggtgaatgctatttgttatggggcgaagctcatg
attccggggttgttgaggtttgcggatgatatcgatattaatcaggaggttgtgttgatg
actacgaagggagaagctattgcggttggtattgctcagatgactacggctgtgatggcc
acgtgtgatcatggagttgtggcaaagattaagcgagtgattatggagagggatacgtat
ccaaggaggtggggattgggacccatggctcaaaggaagaagggattgattaaggagggc
aaactcgacaagcatgggaagccaaatgaaaagactcccaaggactttttggagggatat
aagagtgtggagggagcggcaaaggctccaactttgggaggagcgaatggtggatcaacg
acaactcctgccaagatcaagtcggaggaggccaagcctgattcccctactgccatggat
gaggatagcaactctggggatgagcccaagtcgtcgaagaaggacaaaaagaagaagaag
gaaggaaagactcccaaaaaggagaagaagagcaaaaagtccaagtccaaggagtga
DBGET
integrated database retrieval system
