Thermacetogenium phaeum: Tph_c12580
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Entry
Tph_c12580 CDS
T02276
Symbol
spoVD
Name
(GenBank) stage V sporulation protein D
KO
K08384
stage V sporulation protein D (sporulation-specific penicillin-binding protein)
Organism
tpz
Thermacetogenium phaeum
Pathway
tpz00550
Peptidoglycan biosynthesis
tpz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tpz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Tph_c12580 (spoVD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tpz01011
]
Tph_c12580 (spoVD)
Peptidoglycan biosynthesis and degradation proteins [BR:
tpz01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
Tph_c12580 (spoVD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PASTA
PBP_dimer
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
AFV11479
UniProt:
K4LTW3
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All DBs
Position
1280868..1282922
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AA seq
684 aa
AA seq
DB search
MRLFWLQLVRGSWYQQQALQNRIREIVVEPKRGVIYDRNGNELAVSISTEACYAVPAEVA
KSGKTAYVARELSRILEMKEEDVYELLTRKQHSVWIKFKLTQEQAKEIREKKLPGIGIIP
KPQRYYPKKNLACHVLGIAGDYNQGLEGIEVAYDKELSGLEGRLLVEYDAAGHEIPESTH
QFIEPEQGLSVVLTIDQTIQYIAERELDKIFQERSPKSATIIVMDPHTGEILAMANRPDF
DPNNYQKYSNQARRNKAIADSYEPGSTFKIVTLAAALEEKVADRNDRFFDPGSIRVNGEV
IHCWLPEGHGSQTLAEVVQNSCNPGFITLGLRLGVQKLYKYIKAFGFGSCLGIDLPGEAT
GIIIPENQVKPVDLATISIGQANSVTPLQMVTALSAVVNGGKLMKPYLVKELRNSEGKVV
KRFRPQVLRQVISPETSRLERELLESVVTKGSGRNAYIEGYSVGGKTGTAQKPLPGGGYS
TTDYIASFLGFAPVDDPRLVALVVVDSPQGYPYYGGTVAAPVFREVVRDSLRYLGVPMRY
RPEEKSAGENMTVVPPVVNLPLQEAEKILKEAGLECSRVGNGEIVYGQIPPDGVEVRRGS
KVLLDLRPPESTANGKREVPNLQGKTLRDAAELLGMMGLVLVPEGDDLPTGIAVEQDPQP
GTSLPAGGRVRVKFRPPPNIEVEP
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
gtgcgccttttctggctgcagctggttagaggcagttggtatcagcagcaggcgctccaa
aaccggattcgggagatcgtggtcgaacccaagcggggagtaatctacgatcgcaacggt
aatgagctggcggtaagtatcagcactgaggcctgctatgccgtgcctgccgaagtcgca
aagtcgggcaagacggcttatgtggcccgggagttatcgcggatccttgaaatgaaagaa
gaagacgtctatgaacttcttacccgaaaacagcattctgtctggattaagtttaaactc
acccaggaacaggctaaggaaataagggagaaaaaactccctggcatagggataattcca
aaaccccaacgctattatccaaagaagaatctggcatgtcatgtcctggggattgccgga
gactacaaccaggggctggaagggatcgaagtggcctacgacaaggagttatccggcttg
gaggggcgtctgttggtggagtacgacgccgccggccatgaaatccctgagtccacccat
cagtttatcgaacctgagcaaggtctgagtgttgttcttactatcgaccagaccatccag
tatattgcagagcgggaactggataaaatctttcaggaacgcagcccaaaaagtgctaca
attattgtgatggacccgcataccggggaaatccttgctatggctaacaggccggatttc
gatcccaataactatcaaaagtactccaatcaggcgcgccgcaataaggccattgccgac
agctatgaaccgggttctacttttaaaattgttacactggctgctgctctggaggagaag
gtggccgacagaaatgaccgcttttttgatcccggtagcatcagggttaacggagaggta
atccactgctggcttccggaagggcatgggagccagaccctggccgaggtagttcaaaac
tcctgtaaccccggatttatcactctgggactccgcctcggtgtccagaagttatataag
tacatcaaggccttcggcttcgggagttgtctcggtatcgatctgccgggggaagcaacg
ggtatcattattcccgagaatcaggtcaagcctgtcgacctggcaaccatctcgataggg
caggccaacagcgttacccccctgcagatggtaaccgccctttctgcagtggttaatgga
ggcaaattgatgaagccttatctggttaaagagctgcggaacagcgaggggaaagtggtt
aagcggtttcggcctcaggtcctgcgccaggtgatttcccctgagacatcgcgattggag
agggagttgctggaatcggtagtcaccaaggggtcggggcgcaatgcttacattgaaggg
tattcggtgggtggaaagaccgggacggctcaaaagccgctacccggagggggttattca
actaccgattatatagcctcttttctcggctttgcacctgttgatgatccccgactcgtt
gctctggtggtagttgattctccgcaaggttatccttattacgggggtacggtggcagca
cctgttttccgggaagttgttagggacagcctgcggtacttgggggttccgatgcgctat
cgccccgaggagaagtcggccggggagaatatgacagttgtgccgcctgttgtcaatctg
ccgcttcaagaggctgaaaaaatattgaaggaagcggggttggagtgcagccgggtagga
aacggagagattgtttacgggcagattccccccgacggtgtcgaggtgaggagggggagc
aaggtgctcctcgacctgcgccctcctgaatccactgccaatggcaagcgggaagtcccc
aatctccagggaaagaccctgcgggatgcggcagagctgctggggatgatgggtcttgtg
cttgtccctgaaggggacgacttgccgacggggatcgccgtagagcaggacccgcaaccc
ggcacatctcttccggcaggggggcgtgtcagggtcaaattccgccctccacccaacatc
gaagttgagccatga
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