Thermacetogenium phaeum: Tph_c16220
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Entry
Tph_c16220 CDS
T02276
Symbol
recN
Name
(GenBank) DNA recombination/repair protein RecN
KO
K03631
DNA repair protein RecN (Recombination protein N)
Organism
tpz
Thermacetogenium phaeum
Brite
KEGG Orthology (KO) [BR:
tpz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpz03400
]
Tph_c16220 (recN)
DNA repair and recombination proteins [BR:
tpz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Tph_c16220 (recN)
TLS (translesion DNA synthesis) factors
Other SOS response factors
Tph_c16220 (recN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_29
CCDC-167
MetOD2
DRY_EERY
Motif
Other DBs
NCBI-ProteinID:
AFV11827
UniProt:
K4LIG2
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All DBs
Position
complement(1636454..1638154)
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AA seq
566 aa
AA seq
DB search
MLVQLVIRDFALIDYVELHPGPGLNVLTGETGAGKSIIVDAMNLLVGGRASTELVRTGAE
KACVEGLFDCTDYLHVAEKLVELGVPVSEDGTLLLSREVVREGRSLCRINGRIVPLAMYR
SLGELLVDLHGQHEHQSLLRVGQHGELLDRYCGREVLQQRSLVADLYRRLVMVKEEYEQQ
QAHEAEVTRHLEYLRFAVAEIDRLKPRPGEEEELQQERERFRCGEKLAGLVKEALEELAG
GGRTAPAYDLLSSAAQKLQEIGKLDGSMEELCYELNDIVYRLEDVVERLRSYQDRLEFDP
QRAQEVEDRLFALRGLMRKYGNSLAEVCAFREQAAAEIEGMEGAAGRKEALADEYRRLTK
EYDAEAKKLSSLRRAGAKRFVAAVLRELEGLGMENARLEIGWKVLSDPGPKGYDEVEFLF
SANPGEPLKPLAKIASGGEMSRVMLALKVILAENDRIPTLIFDEIDAGIGGLTLQAVGER
LVAVAGGKQVLCVTHAPQIAGRGQRHFRVEKTFSGERTCVSVRLLQEEERIDELVRMLGN
SGKKEIARKHAREILNSNLSVNKTGR
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
gtgctagtccagctcgtcatcagagactttgccctgatcgattatgtggagcttcatccc
ggaccggggttaaatgttttaactggggaaaccggtgccggcaagtcaattatcgttgat
gccatgaatctgctggtgggtggccgggcatctacggaactggtgcgcacaggcgcagaa
aaggcctgtgttgaagggctttttgattgtacagattacctgcacgtcgccgaaaagctg
gtcgaactcggggttcccgtcagtgaggacggaaccctgttgctttctcgggaagtggtg
cgggaggggagaagcctttgcaggataaacgggaggatagtccccctggcaatgtaccgc
tcgctgggggaactgctggtggatctgcacgggcaacatgagcatcagtctctcttgcgc
gtaggccagcacggtgagttgctcgaccgttactgcgggcgtgaagttctgcagcagcgt
tcactcgttgccgatctgtaccggcgccttgtaatggtgaaggaggaatacgaacagcaa
caggctcatgaggcagaagtaacgcgccacctggaatatctgcggttcgctgtggcggaa
atcgaccgccttaagccgcgccccggcgaggaagaggagctgcagcaggagagggagcgc
ttccgctgcggtgaaaaactggccggtctggtcaaggaagctctggaggaactggcaggc
ggcggcagaactgctcctgcctacgatcttctgagcagcgccgcccagaagctgcaggag
atagggaagcttgacggttccatggaggagctttgttatgagttgaatgatatcgtttac
aggctggaggatgtcgttgaaaggctgaggtcctaccaggacagactggaatttgaccct
cagcgcgcccaggaggtggaggaccggctttttgccctgcggggactgatgcgcaagtac
gggaattccctcgctgaggtttgcgcctttcgggaacaggccgcggccgagatcgaggga
atggagggggcagccggacggaaggaggccctggcagacgaataccggcgtttgacaaag
gagtatgatgccgaggctaaaaaactgtcctcattaaggcgtgccggtgcgaagcgtttt
gttgccgccgttctcagggaattggaaggtttgggcatggagaatgcccgcctggaaatc
ggctggaaggtgttaagcgaccccgggcctaaaggatatgatgaggtcgagtttctgttc
agcgccaacccgggcgagcccttgaagcctctggctaaaatagcctcaggaggcgaaatg
tcgcgcgttatgctggcactaaaggtgattctggcggaaaatgaccgtatacctactctg
attttcgatgaaatcgatgccgggatcggagggttgacgctgcaggcggtgggcgagcgc
ctggttgctgtggccggggggaagcaggtgttgtgtgtcacccatgcaccgcagatcgcg
gggagggggcagaggcattttcgcgttgaaaagaccttttcgggggagaggacgtgtgtt
tccgttcgcctgcttcaagaggaggagaggatcgacgagctggtgagaatgctcggtaat
tccggcaagaaggaaattgcccggaagcacgcccgggagattctgaatagcaatttgtct
gtgaataaaacaggaaggtag
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