Thermacetogenium phaeum: Tph_c17110
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Entry
Tph_c17110 CDS
T02276
Symbol
ddpA
Name
(GenBank) D,D-dipeptide ABC transport system substrate binding protein DdpA
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
tpz
Thermacetogenium phaeum
Pathway
tpz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
tpz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Tph_c17110 (ddpA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tpz02000
]
Tph_c17110 (ddpA)
Transporters [BR:
tpz02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Tph_c17110 (ddpA)
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Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
DUF4223
Motif
Other DBs
NCBI-ProteinID:
AFV11914
UniProt:
K4LV64
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All DBs
Position
complement(1731485..1733158)
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AA seq
557 aa
AA seq
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MPRLKKLKKAVALLLVVGLLATLVGCGGSNQNQAKEVKPEDSIIRITEDWPVFIDPGVGS
KFSDSIALVNTYDTLVFPKPDGTVVPHLATKWDILDNGLTYRFYLREGVKFHNGDELTAE
DVEFSMKRLLDIGEGFAYLFTRNVAEVKAVDKYTVEFKLSQPFGPFLQSLVRLYILNKDE
VLAHIQKNGQYGEMGDYGKNWLLTNDAGSGPYKVKEVKMEEYVLWEKFDDYWGGWDADAP
KYFKLSGSVEPITVRTAVGRRELEITDELQPLENYNMMDKIEGVDVATFLNGHNLNMMLN
TKKAPTDDVHFRRALAYCIDYDAIITSIYPGSSLSKGPVPAVLPGHDPTIPSFKRDLEKA
KEELKKSKYYGKLDQYPVSLSWCAEAPEEEKLALLIQANAAELGIKIEITKKPFGSMMAD
AQKMETTPNASLVFVAPHYNEAGSMLMSRYHSSSCGTWEQMEWLQDENIDRLIEDALATV
DINERFEKYAKAQKAIFDLCPTIWLFDQAEKRAYQSAYIYWPTAERALKKETGCLPMGYD
QYVHDMKVYPEKRLALL
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgcccagattaaaaaaattaaaaaaagccgttgctttgttgctggttgtcggtctgctg
gcaacgctggtgggttgcggtggcagtaaccaaaatcaagcgaaagaggtcaaacctgag
gacagcattatcaggataacggaggattggccggtattcatcgatcccggagtaggaagc
aagttcagcgattcgattgctctggtcaatacctacgataccctggtgtttcccaaaccg
gatggcacggttgtgccgcatttggccaccaagtgggacatcctcgataacggtttaacc
tataggttttatttgagggagggcgttaagttccacaacggtgatgaactaactgcagaa
gacgtggagtttagcatgaagcgccttctggatatcggggaagggtttgcctacctgttt
acgaggaatgtagcggaagtcaaggccgtggataagtatacggtggaattcaagttaagc
cagccgttcggccccttcctgcagtccctggtgcgcctctatatccttaacaaggatgag
gtgcttgcccatatacaaaagaacggtcagtacggagagatgggcgattacggtaagaac
tggcttttaaccaatgatgccgggagcggcccctataaggttaaagaagtgaaaatggaa
gagtacgtgctctgggagaagttcgacgattactggggtggatgggatgccgatgctccc
aagtactttaagctctcagggtcggtggaaccgattactgtaagaacggcagtaggtcgc
cgggagctggaaatcaccgacgaactgcagccattagaaaactacaacatgatggataag
attgagggagtggatgtggcgaccttcctcaacggacataacctcaacatgatgttgaat
accaagaaggcaccgaccgacgacgtccactttagaagggcgctggcttattgcattgac
tacgacgccattataaccagcatctatcccggttcatcactcagcaagggtccggtgccg
gccgtattacccgggcatgacccgaccattccttcttttaagagggatctcgagaaagca
aaagaagagttgaaaaaatcgaagtattacggaaagctcgaccaatatccggtatctctt
agctggtgcgctgaagctcccgaagaagagaaattagccttgttaattcaggcgaatgct
gccgaattggggatcaagatcgaaataaccaagaagccgttcggttcgatgatggcagat
gctcaaaagatggaaacgacgcccaatgcctctctggtttttgtcgcaccgcactataat
gaagcaggatccatgctgatgtccagatatcattccagttcctgcggtacctgggagcag
atggaatggctgcaagatgaaaatatcgatagattaatcgaagatgctttggcgacagta
gacattaatgagcgctttgaaaaatatgcgaaggcgcagaaggccatattcgacctctgc
ccgaccatctggctctttgaccaggccgagaaacgggcctaccagagcgcttacatctat
tggccgaccgcagagagggcattgaagaaggaaacaggttgtctgccaatgggctacgat
cagtacgtccacgatatgaaggtttaccccgagaaacggttagctctactgtaa
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