Treponema rectale: DYE49_04730
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Entry
DYE49_04730 CDS
T06877
Name
(GenBank) ATP-dependent helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
trc
Treponema rectale
Pathway
trc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
trc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DYE49_04730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trc03019
]
DYE49_04730
03009 Ribosome biogenesis [BR:
trc03009
]
DYE49_04730
Enzymes [BR:
trc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DYE49_04730
Messenger RNA biogenesis [BR:
trc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DYE49_04730
Ribosome biogenesis [BR:
trc03009
]
Prokaryotic type
rRNA helicases
DYE49_04730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
ERCC3_RAD25_C
AAA_22
SLFN-g3_helicase
UTP25
Motif
Other DBs
NCBI-ProteinID:
QOS39800
UniProt:
A0A840SCK7
LinkDB
All DBs
Position
complement(1080871..1082031)
Genome browser
AA seq
386 aa
AA seq
DB search
MNSVFEDLSKETVENLNKNGITSPTPVQQKVIPLISQRENILFQSETGTGKTFAYLIPLV
ERLLKLDNPKKEVKLLIASPTYELASQIKIQFQKLSSLKCILCIGGAPVSRQIEMLKEKP
VAVIGGSARLLELIHLKKLKADAVDVLVLDEADRLLSPELRDETIALMERLPKSVQLIGN
SATVSEFTRKTLEKMRTEAGIEGSSMILVELPKEDVLQKRIEHQALFSERRDKIDTLRSY
INAVKPEKLIVFTSKTDQVENIASKLKFRKIECEGLCRHSDKKERKTVIDRFKSGKLKIL
ITTDLASRGLDIPDITHVIQMDLPENDDFFIHRAGRTARAGKTGINCVIGDEVEMHRYAA
LEKKLHLKVYPKILYGGKLLKPEDAE
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgaacagtgtatttgaagatttatcaaaagaaacagtagaaaaccttaataaaaacggc
ataacttcaccgactcccgtacagcagaaagtaattccccttatttctcaaagagaaaac
attctgttccagagtgaaacaggaacaggcaaaacttttgcatatcttattccgcttgtt
gaaaggctcttaaaactggataatcctaaaaaagaagtcaaactgctgattgcttctcct
acatatgaactcgccagccagataaaaattcaatttcagaaactttcttcccttaaatgc
attctgtgcataggcggagcccctgtatccagacagatagaaatgcttaaagaaaaacct
gttgccgttataggcggaagtgcaaggcttctggaactgattcacttaaaaaaactgaaa
gctgatgccgttgacgtcctcgtactcgatgaagcagaccggcttttaagcccggaactc
agagatgaaaccattgcacttatggagagacttccaaaatcagtccagctcattggaaat
tctgctacggtaagtgaatttacaagaaaaaccctggaaaaaatgagaacggaagcaggc
attgaaggttcatcaatgatacttgtagaacttccaaaagaagatgttttacagaaacgc
attgaacaccaggccttattttcagaacgcagggacaaaatagacaccctgagaagttat
ataaacgcagtaaaacctgaaaaactaatcgtatttacttcgaagacagaccaggtagaa
aacatcgcttcaaagttgaaattcagaaaaattgaatgtgagggactatgccgtcacagc
gacaaaaaagaaagaaaaacggtaatagacagattcaaaagcggaaaactcaagattctc
ataacaacggatcttgcttcaagaggactggacattcccgatataacgcatgtaatacag
atggatcttcctgaaaatgacgacttttttatccatcgggcaggacgtacggcccgtgca
ggaaaaacaggaataaactgtgtaattggagatgaggttgaaatgcaccgttatgcggca
ctggaaaaaaagcttcatctaaaagtctatcctaaaatcctttacggcggaaaacttctg
aagccggaagatgcagaataa
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