Thermocrinis ruber: THERU_08155
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Entry
THERU_08155 CDS
T03001
Name
(GenBank) hypothetical protein
KO
K03092
RNA polymerase sigma-54 factor
Organism
trd
Thermocrinis ruber
Pathway
trd02020
Two-component system
trd02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
trd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
THERU_08155
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
THERU_08155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
trd03021
]
THERU_08155
Transcription machinery [BR:
trd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
THERU_08155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
HTH_IclR
HTH_3
LacI
Sigma70_r4
HTH_17
Rv2175c_wHTH
HTH_38
Motif
Other DBs
NCBI-ProteinID:
AHE96916
UniProt:
W0DEY0
LinkDB
All DBs
Position
complement(1459387..1460496)
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AA seq
369 aa
AA seq
DB search
MKLKTTIKTKPSLSVVLGPFVGLLEKSTESLLEQLEEEAQKNRCITHFVRRKPRFFFSEE
VPQREIPFSQSQWESIMNQLKVELDEEELEVALAILHQLDHRGFFVGDEAQIAKEFGTSK
EFVEDLREFIMTELEPVGIASKNYEEFFCVQLRELYPEEPELCQKVLEFLKTGVGDQRVK
DIATRLRLTPFEGEQSPYKVGSVDVILERDQDGWLVLLMEDFIDFEVREGEREEKERALR
WKKLLDLRRKLLRGCINLVVERQEDFLLGIGPLKALELTEVAQKLGVSVSVISRLISNKY
VKTPTGIYPLRFFFQRRSKGGYSREQVLRAMKEILQKHGKLSDAKVAELLREKGIELSRR
TVCKYRRML
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgaaactaaaaactaccatcaaaaccaagccaagcttaagcgttgtgcttggtcccttt
gtgggtcttttggaaaagtccaccgaaagccttttagagcagttggaagaagaagcccaa
aagaatagatgcataacgcactttgttagaagaaagccaaggttcttcttttctgaggag
gttccacagagggagataccctttagccaaagccaatgggaaagcataatgaatcaacta
aaggttgagcttgatgaggaagaactggaagttgccttggcaattctccatcagttggac
cacaggggcttttttgtgggcgatgaagcccagatagccaaagagtttggaacttccaaa
gaattcgtagaggatctcagagagtttataatgaccgagcttgagcccgtgggcatcgct
tccaagaactatgaagaattcttctgcgtccaactgagggaactttatccagaggagccg
gagctctgtcaaaaggtgttggagtttttaaagacaggtgtaggagatcaaagggtaaag
gacatcgctacccggctgaggctaacgccctttgaaggagagcagagcccttacaaggtg
ggcagtgtggatgtgatccttgagagggatcaggacggttggctggtgcttttgatggag
gattttatagactttgaggtccgagagggagaaagggaagaaaaggaaagagccctccgg
tggaaaaaactgctggacttaaggagaaaacttctaagagggtgcataaacttggtggta
gaaaggcaggaggactttctgttgggtattggtcctcttaaggctttggagctaacagag
gttgcacaaaagcttggcgttagcgtctccgttataagcagacttatttccaacaaatac
gtaaaaacacccaccgggatctatcctcttaggttcttctttcaaaggaggtccaagggg
ggctacagcagggagcaggtccttagggcaatgaaggagatccttcaaaaacacggtaag
ctcagcgatgccaaagtggcggagcttttgagggaaaagggcatagagctttcccgtagg
accgtatgcaagtacaggagaatgctatga
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integrated database retrieval system
