Trichoderma reesei QM6a: TRIREDRAFT_103311
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Entry
TRIREDRAFT_103311 CDS
T02991
Name
(RefSeq) hypothetical protein
KO
K10752
histone-binding protein RBBP4
Organism
tre
Trichoderma reesei QM6a
Pathway
tre03082
ATP-dependent chromatin remodeling
tre03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
tre00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
TRIREDRAFT_103311
03083 Polycomb repressive complex
TRIREDRAFT_103311
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tre03036
]
TRIREDRAFT_103311
Chromosome and associated proteins [BR:
tre03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
TRIREDRAFT_103311
Histone modification proteins
HAT complexes
HATB complex
TRIREDRAFT_103311
HDAC complexes
Sin3A-HDAC complex
TRIREDRAFT_103311
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
TRIREDRAFT_103311
PRC2.2
TRIREDRAFT_103311
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
TRIREDRAFT_103311
Heterochromatin formation proteins
Other heterochromatin formation proteins
TRIREDRAFT_103311
Chromatin remodeling factors
NuRD complex
TRIREDRAFT_103311
NuRF complex
TRIREDRAFT_103311
NuRF complex (fruit fly)
TRIREDRAFT_103311
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
MIOS_WD40
NBCH_WD40
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
18480608
NCBI-ProteinID:
XP_006961459
JGI:
Trire2_103311
UniProt:
G0R7J4
LinkDB
All DBs
Position
Unknown
AA seq
425 aa
AA seq
DB search
MVHEEEDDLEERLINEEYKTWKKNSPFLYDMILGTALTWPTLTVQWFPDVKEPEGKNYRM
HRLLLGTHTSDDSANFLQIADVQIPKAVAPNPDHYDEERGEIGGYGKAGDVAALKCDIVQ
RIEHPGEVNKARYQPQNPNIIATLCVDGKILIFDRTKHPLQPATLGKVNAQIELIGHKAE
GFGLNWNPHEEGCLVSGSEDKTMCLWDLKTLEADSRILRPARRYTHHTQVVNDVQYHPIS
KNFIGSVSDDQTLQIVDLRSAETNKAALVATRGHLDAINALAFNPKSEVLVATASADKTI
GIWDLRNVKDKVHTLEGHNDAVTSLAWHPTEAGILGSGSYDRRIIFWDLSRVGEEQLPDD
LDDGPPELLFMHGGHTNHLADFSWNPNEPWLVASAAEDNLLQIWKVAESIVGKDDGDLPV
DELDR
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggtgcacgaggaggaagatgacctcgaagaacgcctcatcaatgaggaatacaagacg
tggaagaagaacagcccattcctctatgacatgatcctcggtaccgctttgacttggcct
actctcacggttcagtggttccccgacgtcaaggaaccagagggcaaaaactaccgcatg
caccgcctcctgctcggtacccatacctctgacgacagtgccaactttctccagatcgcc
gacgtccagataccaaaagccgtggcgcctaaccccgaccactacgacgaggaacgaggc
gagattggcggctatggaaaggcaggcgatgttgctgctctcaagtgcgacattgtgcag
agaattgagcatcccggcgaagtcaacaaggcccgctatcaacctcaaaacccaaacatc
attgccactctttgcgttgatggcaagatcctcatcttcgaccggacgaagcatcctctg
cagccagcaacgctgggcaaagtaaatgcgcagattgagctgatcggccacaaggcggag
gggtttggcctcaattggaacccgcacgaggagggctgtttggtgtcgggtagcgaagac
aagaccatgtgtctctgggacctgaaaactctggaggcagattcgcggatactgcgacct
gcccgcagatacacacaccacacccaagttgtcaatgatgttcaataccatcccatctca
aagaacttcattggctctgtctcagacgatcagactctgcagattgttgatttgcgatct
gccgagaccaacaaggccgctcttgtggcaacgcgtggccacctggatgccatcaacgcg
ctggccttcaatcccaagtccgaagttctcgttgccacagcctccgccgacaagacgatt
ggcatctgggatctacgaaacgtcaaagacaaggtgcacactctcgagggccacaacgac
gcggtaacatcccttgcctggcatcccaccgaagccggcattctgggaagcggcagctat
gatcggagaatcatcttctgggacctgtcccgcgttggcgaagagcagttgcctgatgac
ctggatgacggcccgcctgaattgctcttcatgcacggcggccacacaaatcatcttgcc
gacttcagctggaatcccaacgagccttggttggttgccagcgccgccgaagacaacttg
ctacagatctggaaagtcgcagagtccattgttggcaaggatgatggcgacttgccggtc
gatgagcttgaccgatag
DBGET
integrated database retrieval system