Trichoderma reesei QM6a: TRIREDRAFT_121656
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Entry
TRIREDRAFT_121656 CDS
T02991
Name
(RefSeq) hypothetical protein
KO
K18716
nucleoporin NUP42
Organism
tre
Trichoderma reesei QM6a
Brite
KEGG Orthology (KO) [BR:
tre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tre03019
]
TRIREDRAFT_121656
Messenger RNA biogenesis [BR:
tre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
TRIREDRAFT_121656
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH_4
zf-CCCH
zf_CCCH_4
zf-CCCH_2
Nucleoporin_FG
Torus
Motif
Other DBs
NCBI-GeneID:
18483213
NCBI-ProteinID:
XP_006964991
JGI:
Trire2_121656
UniProt:
G0RI10
LinkDB
All DBs
Position
Unknown
AA seq
513 aa
AA seq
DB search
MAVCRFYQQGYCKFGNSCRYEHPNAGGNRNQSSNRFGSLGGTNTGTSDSALSKYSITPEV
IEKDLTSDAPQWILSAYAPGRDAPDQLFGGYPREQSFEELRLHYLMGKASGNEQQALNEA
QQLYQNAKQQMESAARNPMEAARFIVEGENRHPNRHDICREGTQGAPFGVFAVGKRSNAA
ASPFGGNTAMATQTTASAFGQPTALGQRPNPFGQPSQPAFGQPTQPSSAFGQPTQTASAF
GQPQATSAFGQPSALGAKPSPFGAPAFGQAPQPNAQPSAFGQPQAQGSAFGQPSQLGQKP
NPFGSATGAAAGPFGATNAGPSPAANPFASSQGPNAPNPFGSNISNQPNNAPSAFAQPTQ
PASASPFGQPPAPAANPFASANQGPTAPAANPFGQQPQQPSQPNNPYPPNSSKQHPPIES
YSTRTMDGRLATFKGKPVTYQGGQPGIRAFDGTWTRIWFPNGPPGYNKDTELPLEDYSDV
VKKQWAAFAQTGVFADGLMPELPPPRECTQWDF
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgtgcagattctaccagcaaggctactgcaagttcggcaacagctgtcgctac
gagcaccctaacgccggaggcaaccgcaatcagtcctcgaaccgcttcggctctctggga
ggaaccaacacgggcaccagtgacagcgcgttatcgaaatatagcataacccccgaggtc
attgagaaggacctgacgtctgacgcgccccaatggatcctgtcggcgtatgccccgggg
cgagacgctccggaccagctctttggaggctatccgcgcgaacagagcttcgaggaactc
agactccactatctcatgggcaaagcctcgggaaacgaacagcaggccctgaacgaagca
caacaactataccaaaatgcgaagcagcaaatggaaagcgcggcgcgaaatccaatggag
gcggcacgattcattgtcgagggagagaaccgacacccgaacagacatgatatatgcaga
gagggaacccagggcgcgccgtttggggtcttcgccgtaggaaaacggtcaaacgcagcc
gcaagcccatttggcgggaacacggcgatggcgacacagacaacagcgagtgcctttggc
caaccgaccgctcttggacaacggccgaaccctttcggccaaccctcacagccagcgttc
ggacagccaacgcagccatcatcagcgttcggacaaccgactcaaacggcctctgccttt
ggtcaaccacaagcgacgtcggcctttggccagccgtctgctctcggggccaaacctagt
ccgtttggtgccccggcttttggccaggcccctcagccaaacgctcagcccagtgcattt
gggcaaccgcaggcgcaaggaagtgcttttggccagcctagtcagcttggtcagaagccg
aatccgtttggttctgcaactggcgctgccgcaggtccttttggcgcaacaaacgccggc
ccctctcctgctgccaatccttttgccagctcacaagggcccaatgcaccgaatcccttt
ggctcaaacatctcgaaccaacccaacaatgctcccagtgcatttgctcagccgacccaa
cctgcatctgcctctccctttggacagccacccgcacccgctgccaatccatttgcgtcc
gcaaaccaaggcccgacagcccctgccgccaatccattcggccaacagccgcaacaacct
tctcagcccaataacccataccctcctaacagctcaaaacagcatcctcctatcgaaagc
tatagcacaagaacaatggatgggcggctcgccacgttcaagggaaagccggtgacgtat
cagggcggacagcctggtatccgtgcctttgacggtacttggacgcggatctggttccct
aatggtcctccaggctacaacaaggatacagaactgcctcttgaagactatagcgacgtg
gtgaagaagcagtgggctgcctttgctcagacaggagtattcgccgatgggctgatgcca
gagctaccaccgccgcgagaatgtacacagtgggatttttaa
DBGET
integrated database retrieval system