Trichoderma reesei QM6a: TRIREDRAFT_21330
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Entry
TRIREDRAFT_21330 CDS
T02991
Name
(RefSeq) hypothetical protein
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
tre
Trichoderma reesei QM6a
Pathway
tre03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tre00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
TRIREDRAFT_21330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tre03021
]
TRIREDRAFT_21330
03019 Messenger RNA biogenesis [BR:
tre03019
]
TRIREDRAFT_21330
Transcription machinery [BR:
tre03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
TRIREDRAFT_21330
Messenger RNA biogenesis [BR:
tre03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
TRIREDRAFT_21330
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
CFIA_Pcf11
VHS
Gag_p24
zf_UBZ
Motif
Other DBs
NCBI-GeneID:
18483963
NCBI-ProteinID:
XP_006960998
JGI:
Trire2_21330
UniProt:
G0R6U9
LinkDB
All DBs
Position
Unknown
AA seq
575 aa
AA seq
DB search
MSSDGAEVAEDYRLALEDLSSNMRFEISNLTVIARENTEHALAIAEVLQQHILKAPPNKK
LPALYVMDSIVKNVGTPYTLYFGRNLFKIFMESYAVVDHGIRRKMEEMLKTWKDPVPGSL
DTRPVFSHELVRPIENALMKVRAASMPQQTQSAIPGRPRSAMFPPHRNTPTPPGMRGFAG
LPMPSGISVETLNGDIQKLIVAMRAEFSQNPHDGGVQSRLKALLDLQTVLQHSTLPPDQL
ELIKNKVTELAAVTIRAPLAPSVTPTPVPAAQPAAPVTLDQLLGQGAMAALLGMQAASSQ
NTTPQPPFAGVPIRSPPMNHTEPPKAAAMPPAMPAAPAPAPNALSLVEQLRAAGLLPPAT
PTNVPAPSQAPPAAPPPSLFPPGLFRPDAVAALYDDLGPPCTQCGRRFKTDEEGRRKKTA
HMDWHFKVHQRSTEAEKRGTHRSWYVDQQDWVKAREAVDAIHDVSSKEESAQASKDSEGP
KYILVPDPSSGINTVCPICQERFENKWFDTVQEWVWLDTVLVGNRAYHASCRAEATRDRD
STPGLSRRTPEPVLGKRKAEAGLASPKVRVQKAYV
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctgacggagctgaggtggcggaggattaccgccttgccctggaagacctctcc
tccaacatgcgctttgagatcagcaatttgacagtaattgctagagagaatactgagcat
gctttggccattgcagaggttctgcagcagcacattctcaaggcgccaccgaataagaaa
ctacccgctctctatgtgatggactcaatcgtcaaaaacgttggcactccttacacgctg
tatttcggccggaacttgttcaagatattcatggagtcatacgcggtggtcgaccacggc
atccgcaggaaaatggaggaaatgcttaagacgtggaaggatcctgttcccggctcattg
gacacacggcccgtcttttcacacgagctggtacggccgatcgagaacgccttgatgaag
gtcagggccgcgagcatgcctcaacagacccagagcgccatacctggccggcctcgatca
gcaatgttccctcctcaccggaatacccctacgccgccggggatgcgtggattcgccggc
ttgcccatgccctctggaataagcgtagagacgttgaacggtgacattcagaaactgatt
gttgcgatgagggccgagttctcgcagaatccgcatgatggcggcgtccagagcaggctt
aaggcacttttggacctccagactgttttgcagcactcgactctgccaccagaccagctt
gagctcattaagaacaaagtaaccgaacttgctgccgtgaccataagggcccccctggcc
ccctccgtaactccgacacctgtgccggcagcccagcctgccgcgccggtgactcttgat
caattgctgggacaaggggcgatggcggctttgttgggaatgcaggcggcgagctctcag
aacacaacaccccagcctccgtttgctggtgtccccatacggtcaccaccgatgaaccat
accgaaccgcccaaggcggcagcgatgccaccagcgatgccggcggctccggctccggct
ccgaatgccttgtccttggtagaacagcttcgagcggccggtctgctgccacccgcgaca
cctacgaatgtcccggccccaagccaagcaccgcctgctgcaccaccgccgtcactgttc
cctccgggcctattccgacccgatgctgtcgccgccttgtatgacgatctcggacctcca
tgcacgcagtgtggtcggcggttcaagacggacgaggagggcaggcggaagaagacggct
cacatggactggcacttcaaggtacaccagcggagcaccgaggccgagaagcgaggcacc
caccggagctggtacgttgaccagcaggactgggtcaaggctcgcgaagcggtcgatgcg
atacatgacgtgtcctccaaagaagagtctgctcaagcatccaaggactcggaagggccc
aagtacattctcgtgcccgatccaagcagcggcatcaacaccgtgtgtccgatttgccag
gagaggttcgaaaacaaatggttcgacacggtgcaggagtgggtgtggctcgacacggtc
ctggtgggcaaccgagcatatcatgcctcgtgtcgcgccgaggcgacgagggaccgagac
tctacgcctggtctgtcacggcgcacgcccgagccggtgctggggaagcggaaagcagag
gcgggtctggcgtcgcccaaggtgcgagtacagaaggcgtatgtgtaa
DBGET
integrated database retrieval system
