Trichoderma reesei QM6a: TRIREDRAFT_47971
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Entry
TRIREDRAFT_47971 CDS
T02991
Name
(RefSeq) hypothetical protein
KO
K03362
F-box and WD-40 domain protein 1/11
Organism
tre
Trichoderma reesei QM6a
Pathway
tre04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
TRIREDRAFT_47971
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tre04121
]
TRIREDRAFT_47971
03036 Chromosome and associated proteins [BR:
tre03036
]
TRIREDRAFT_47971
Ubiquitin system [BR:
tre04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
TRIREDRAFT_47971
Chromosome and associated proteins [BR:
tre03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
TRIREDRAFT_47971
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
F-box-like
NBCH_WD40
F-box
ANAPC4_WD40
WDR54
Cytochrom_D1
F-box_4
Motif
Other DBs
NCBI-GeneID:
18485176
NCBI-ProteinID:
XP_006965257
JGI:
Trire2_47971
UniProt:
G0RJ26
LinkDB
All DBs
Position
Unknown
AA seq
667 aa
AA seq
DB search
MRSLSLSNLLRHHKHATFSHDDPQPSRQTNDIAVDDSEDTHELPARKLRGRAQSTAGTIK
GVIRRASLSLKGIVHRRPSITAEPADAHNQAVAHARPTSAHHTWNRLRQVAPFRRSRSFY
GFHVTEDGLYEQRQGPNPHMPIPAMGDEPPYIPMNTGGAAKASVALQNEYFQRQAMHTQW
LQSSSEDSNDRESGIGIVVTEPFAGSSVSDDGSFPAHDGNISRIDFIKQLPSELAIHVLA
YLDAAALAKASVVSRHWHDVVRNQHIWRESCLREMTTTYATSEPVKPGTGLGIPPVVPTN
DWKQIYRAKLELAQKWKEGKARPMYLNGHTDSIYCLQFDEYKIISGSRDKTIRIWDMQTL
ECRLVIGPPEVVNAPNLLEDAEGNPVHYVNFSDSFRAAPSTPKVVSFAEHHRASILCLQY
DDEIMVTGSSDSTCIVYDMRNGYRPIRRLTHHTAAVLDLAFDEKHIVTCSKDISICVWDR
ATGALLRQLRGHTGPVNAVQMRGNTIVSCSGDFRVKLWNIDTGRCIREFVGHTKGLACSQ
FSEDGRYVASAGNDKVIRIWDANTGECVREMRAHENLVRSLHIDSVSGRLVSGSYDTDIK
VWDMETGRQLLDFPRWHASWVLSAKSDYRRIVSTGQDPKILIMDFGAEVEGIDMLKSDNT
GVGGGIF
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgcggagcctgagcctctcgaacctcctccgccaccacaagcacgctaccttttctcac
gacgatccgcagccctcgcgacagaccaacgacatcgccgtcgacgactcggaagacaca
cacgaattgcccgctcgaaagctgcgtggccgtgctcaaagcactgccggcaccatcaag
ggggtgattcgccgagcctccttatcactcaagggcatagtccaccgccggccatccatc
acagccgagccggcggatgcccacaaccaggccgttgcccacgccagaccgaccagcgcc
catcacacttggaaccgccttcgccaagtcgcgccctttcgccgctcgagatccttctat
ggcttccatgttactgaggatggcctctacgaacagcgccaaggcccgaacccgcatatg
cccattcccgccatgggagacgagcctccatatattcccatgaacacgggaggtgccgcc
aaggcctccgtggcactccagaacgagtactttcagaggcaggccatgcacacccagtgg
ttgcaatcgtctagcgaggatagcaacgaccgtgagagcggcattggcattgtcgtcact
gagccatttgccgggtcgagtgtcagcgacgacgggtcatttcccgctcatgatggcaac
attagcaggatcgatttcatcaagcagttaccctccgagctggccattcacgttctggcc
tacctagatgccgccgctctagccaaggcaagcgtcgtctccaggcactggcacgatgtg
gttcgcaaccagcacatctggcgagagtcttgcctacgagaaatgaccaccacctatgcc
accagcgagcccgtcaagcccggcactggcctgggcattcctccggttgttcccaccaac
gactggaagcaaatctatcgtgccaagctcgagctcgctcagaagtggaaggagggcaag
gcccgtcccatgtatctcaacggacacaccgacagcatctactgtctccagtttgatgag
tataaaatcatctctggctccagagacaagacgattcgcatctgggacatgcagactcta
gagtgtcgtctggtcatcggacctcctgaagtggttaacgcccccaatctgctggaagat
gccgaaggcaacccggtgcactatgtcaacttctccgacagcttcagggccgcgccctcc
acgcccaaggtggtatcctttgcggagcatcacagagcgtctatcctgtgcttgcagtat
gacgacgagatcatggtgacaggttcctcggattccacgtgcatcgtctatgacatgcgc
aacggctaccgaccgatccgtcggcttacccaccatacggctgctgtgctcgacctggcc
tttgacgagaagcacattgtaacgtgcagcaaggacatcagcatctgtgtctgggaccgg
gcgaccggcgccctgctccgccagctccgcggccacacgggccccgtcaacgccgttcag
atgcgcggaaacaccatcgtgtcgtgctccggcgacttccgcgtcaagctgtggaacatt
gatacgggaagatgcattcgcgagtttgtcggccacacaaagggcctggcgtgctcccag
ttctccgaggatgggcgctacgtcgcctcggcaggcaacgacaaggtgattcgcatttgg
gacgccaacacgggcgagtgtgtccgcgagatgcgcgcgcacgagaacttggtgcgcagc
ctgcacattgacagcgtcagcgggcgacttgtcagcggcagctacgacaccgacatcaag
gtctgggacatggaaacgggccgccagctgctcgactttcctcgctggcatgccagctgg
gtgctcagcgcaaagagcgactaccgacgcatcgtcagcaccgggcaggaccccaagatt
ctcatcatggactttggcgcggaggtggagggcattgacatgctgaagagcgacaacacc
ggcgtcggcggtggcatcttttga
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integrated database retrieval system
