Trichoderma reesei QM6a: TRIREDRAFT_53286
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Entry
TRIREDRAFT_53286 CDS
T02991
Name
(RefSeq) hypothetical protein
KO
K11600
exosome complex component RRP41
Organism
tre
Trichoderma reesei QM6a
Pathway
tre03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TRIREDRAFT_53286
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tre03019
]
TRIREDRAFT_53286
Messenger RNA biogenesis [BR:
tre03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
TRIREDRAFT_53286
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
TRIREDRAFT_53286
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
18485514
NCBI-ProteinID:
XP_006961753
JGI:
Trire2_53286
UniProt:
G0R8Q4
LinkDB
All DBs
Position
Unknown
AA seq
287 aa
AA seq
DB search
MPLDTSTYSLALLRIDGRRWNDLRRLHAQIHTQEAADGSSYLEMGHTKVMCVVTGPAEPQ
AGQQKRGTTGGGGGGGGAAAAGGALGAGQKDAASIVVNVVVAGFSSVDRKRRGRNDRRIQ
EMEITIQKALAANLHTHLFPHSTITVSLHVLSQDGSLLAALINATTLALIDAGIPMTDYI
TACTAGSTSSYAAGDDSADPLLDLNTQEEQELPFLTVATLGDSDKVAVLVCESRVQVSRL
EGMLVVGVDGCRQVRRLLDGIVRAKGSKMIKEGVVQRSDVMAVSLEE
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgcctctcgacacatcgacatactcgctcgcgctcctgcgcatcgacggccgccggtgg
aacgacctccggcggctgcacgcccagatccacacgcaagaggccgcggacggctcgtcg
tacctggagatgggccacacaaaggtcatgtgcgtggtgacgggcccggcggagccgcag
gcagggcagcagaagagggggactacgggaggaggaggaggaggaggaggtgctgctgct
gctggcggtgcgctgggtgctggacagaaggatgcggcgagcattgtggtgaatgtggtg
gttgctgggttttcaagcgtggatcggaagaggagggggaggaatgacaggcgcatccaa
gagatggaaatcaccatccagaaagccctggccgccaacctccacacccacctcttcccg
cactcgacaatcaccgtctccctccacgtcctctcccaagacggctccctgctcgccgcc
ctcatcaacgccaccaccctcgcgctcatcgacgccggcatccccatgacggactacatc
accgcctgcaccgccggctcgacctcgtcctacgccgcgggcgacgactcggccgacccg
cttcttgatctcaacacgcaggaggagcaggagctgccgttcttgacggttgctacgctg
ggcgactcggataaggttgcggtgctggtgtgcgagagcagggtgcaggtgagccggttg
gagggcatgctggtcgtgggcgtggatgggtgtagacaggtgaggaggttgctggatggc
attgtgagggcgaaggggagtaagatgattaaagagggggttgtgcagaggagtgatgtg
atggctgtgagcttggaggagtaa
DBGET
integrated database retrieval system
