Trichoderma reesei QM6a: TRIREDRAFT_74682
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Entry
TRIREDRAFT_74682 CDS
T02991
Name
(RefSeq) hypothetical protein
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
tre
Trichoderma reesei QM6a
Pathway
tre03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TRIREDRAFT_74682
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tre03019
]
TRIREDRAFT_74682
Messenger RNA biogenesis [BR:
tre03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
TRIREDRAFT_74682
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
TRIREDRAFT_74682
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NOT2_3_5_C
DUF5650
Motif
Other DBs
NCBI-GeneID:
18488371
NCBI-ProteinID:
XP_006962101
JGI:
Trire2_74682
UniProt:
G0RAU2
LinkDB
All DBs
Position
Unknown
AA seq
484 aa
AA seq
DB search
MNRPGAVPQSLRGMPGAFGGQQQPQQGRSVSTRLPNGKLANNTSGWAFNAAVPMGGAAFQ
NQARQLGGNVSFAQSLSGSQPATPLDLSEFPSLSNNSQIPSTTQGSMWSTAGSSRTISGP
IQRNQPAPGPSQQGGQDDLFGPPSSRLQQSNQGPFRFGPQPTQVQPNSVDDFPPLNRTSN
GEIGSERGANLMSSLGFNPQNPGSSGPMQNNGGNGLLNALTATNRANEARSSPAIGTANG
PGRQQQQQQQPPQPPTQAQPQPQAQQQQHDSKQKAATVREDDSAKASERKDSQSAEVVDP
LAGMPAVDKWGIKGLRTLMNTYPDYHAMIIGMDPSTIGLDLSSPELISTQVYSLFDDAPP
KPTVNLNKFRLPECYSVTNVQPIDTKIQSFNEETLFWIFYSCPLDAKQQMAAVELHSRNW
RWHKKLQVWLTKDEHMTPQILSPNHERGYYIVWDTATWRKDRREFTLHYGDLDTSLGQPP
PVLS
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgaccaggagcggtgccgcagtcgttgcgcggaatgcctggcgctttcggaggc
caacagcaaccacagcaaggccgatctgtgtcaactcgattaccgaatggtaaactagcg
aacaatacctcaggctgggcgttcaacgcagctgttcccatgggcggtgctgcctttcag
aaccaggctcgccagctgggcggcaatgtcagctttgcgcagagcttgagcgggtcacag
cctgcaacaccgctcgacctttcggaatttccttctctgtcgaacaactctcagatcccc
agcactacccagggatcgatgtggtctacggcgggctcttcgcgaaccatcagcgggcca
atccagcggaatcagccggcgccaggcccttcccagcagggcggccaagatgacctcttt
ggtcccccgtcgtcgcggctgcagcagtcaaaccagggcccctttcgcttcgggccacag
ccgacgcaagtccagcctaatagtgtcgacgatttccctccgttgaaccggacttccaac
ggagagataggctcagaacgtggagccaacttgatgtcctctctgggcttcaacccgcag
aaccctggctcctcagggcctatgcagaacaacggtggaaacggcctgctgaacgctctg
acggcgacaaaccgggcaaacgaagcacgatcgtcgcctgccataggcacggcaaacggt
cctggtagacagcagcaacaacaacaacagccgccacagcctccgacccaggctcagccg
cagccacaggcacagcagcaacagcacgatagtaagcagaaggcggcaacggttcgggaa
gacgactcggcaaaggcgtcagaacgcaaggacagccagtctgcagaggtcgtagaccca
ctagctggtatgcctgcggttgacaaatggggcatcaagggactgcggacactgatgaac
acctaccccgattatcacgccatgattatagggatggatcccagcaccattggcctcgat
ctgagctcccccgaactgatttcaacccaagtctactcattatttgacgacgctcctcca
aagccgacagtgaaccttaacaagtttcgactgcccgagtgctacagcgtgacaaatgtg
cagccgatagacaccaagatacagagcttcaacgaagagactctgttctggatcttctac
agctgtcccttggatgcgaagcagcagatggctgcagtagagctgcattctcggaactgg
cgatggcacaagaaactgcaagtctggctaacaaaggacgagcacatgacgcctcaaatt
ctgagtccaaaccacgagcgaggatactacattgtgtgggataccgccacttggcgaaag
gatcgaagagagttcacgctgcactatggagatctggacacgtccctgggacagccaccg
ccagttctgtcataa
DBGET
integrated database retrieval system
