Talaromyces rugulosus: TRUGW13939_01167
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Entry
TRUGW13939_01167 CDS
T06879
Name
(RefSeq) uncharacterized protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
trg
Talaromyces rugulosus
Pathway
trg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
trg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TRUGW13939_01167
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
trg03041
]
TRUGW13939_01167
Spliceosome [BR:
trg03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
TRUGW13939_01167
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GFIT
Motif
Pfam:
WD40
HSCB_C
PRP4
ANAPC4_WD40
NBCH_WD40
DnaJ
WD40_like
Motif
Other DBs
NCBI-GeneID:
55988680
NCBI-ProteinID:
XP_035340263
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Position
I:complement(join(3568297..3569211,3569368..3570845,3570910..3570985))
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AA seq
822 aa
AA seq
DB search
MMHPARQAYVEEAADDDAGIDLADIPVDRDYDMPAAAAGIAPERASALMSQFDRKRRAAA
INVPTDDNRVRLKLRELGEPITLFGEGPSDRRDRLRELLTTLEEQQGGDVEMREATEETE
TLEAEEEGEQQEEFYTEGSPDLLEARKKIALYSLPRAKARVASQQEQSTIHLRTHIKHRK
AVKEKLQGFELYGSQIAADRPVSITRFSPDGQSLATGDWTGGVKVLTVPNLEEKLSVKGH
TDRVSGISWFPGATLPDSNVSESSLNLASGGGEGNINLWSLDKKQPLSTLSGHSERVCRV
EFHPSGQYLASASYDTTWRLWDVETTTELLLQEGHSREVYAVSFNSDGSLLASGGLDSHG
RIWDLRTGRTVMVLQGHIREIYGVDWGADGYRVLTSSGDGWVKCWDLRKVDCSGSIGAHK
SVVSDVRWYKGGDSSHSYLPSTGAEKGDAMVTDEAAPAPTPRKAGTFFVSSGFDRNVNVF
SADDWSMIKSLTGHSDKVLSVDISHDARWIASASHDRTRLSGMRRRPKQAEAEAKLTFDL
ASSPHSLPIDSCPLQFIMRGAALWLRPQRLMPSARGQLSPLSMRPLATCLSCRYAYASKQ
SALLQQRRASSSYRDSYPDSSSTRSSPPDIDTTNYYTLFPSTLPYGPPPNSFFTFNTSAL
RREFLELQGATHPDKFPQGPDKQRAETLSARLNDAYRTLCDPLTRAQYLLAEFHGIDVLA
EDGSGTSRAGLDPETLMEVMDAQEKVEELSNVPAAEAEKVVKKLRNANADRIETTVERLA
SSFDISDIERAHTETVRLRFWYSLRDGLREWEPGHGEIRIVH
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaccccgcgcggcaggcgtacgtggaggaggccgccgacgacgatgcgggcatt
gatctcgccgacattcctgttgaccgcgattatgacatgcctgccgccgccgcaggcatc
gcccccgagcgagcatctgccctaatgtcacaatttgatcgaaaacgacgagcggccgcg
atcaacgtgcctaccgacgacaaccgcgtgcgcttgaagctgcgcgagctcggggaacct
atcacgctgtttggcgaggggccgtcggaccgacgagatcggctgcgagagctgctgaca
acgttggaagaacagcaaggcggtgatgtcgaaatgcgcgaggctaccgaagagacggaa
acgctggaggccgaggaagagggagaacagcaagaggagttttatacagaggggtctccg
gatctattggaggcgaggaagaagattgcgctatactcgttaccccgagcaaaggcgcgg
gtagcgtcgcagcaagaacagtcgactatacacctacgaacgcatattaaacatcgcaag
gcggtcaaggagaaattacaaggttttgagttatatggatcgcaaatcgctgctgaccgg
ccggtcagtatcacacgattttccccggacggccagtcacttgcgacgggtgattggacg
ggcggggtcaaggtgttgacggtgccaaacctggaagagaaactcagtgtcaagggccat
acggatcgagtgagcggaatttcgtggtttcccggtgctacattgccagattcgaatgtg
tcagagtcttcgttgaatttggcgtcgggaggaggcgaaggtaatatcaacctttggtca
ctagataagaaacagccgttatctacactgtcagggcactcggaacgtgtttgtcgagtg
gaatttcacccttcgggccagtatctggcatcggcttcatacgacacaacatggcggctg
tgggatgttgaaacgacgacggaattgctactacaagaaggccattcccgcgaggtgtac
gccgtttcattcaactcagacggatcccttctagccagtggaggtttggatagtcacgga
cgtatctgggatcttcgcactggccgaacggtcatggttctccagggtcacatccgcgaa
atctacggcgtcgactggggcgccgatggataccgagtgctgacgagttcgggagatggc
tgggttaaatgctgggatcttcgcaaagtcgactgcagtggtagcattggagcacacaag
agcgtcgtttcggacgtgagatggtacaaagggggcgattcatcgcattcatacctcccg
tcaacaggggcagagaaaggcgatgctatggtgacagacgaggctgcaccggcgccgacg
ccgcgaaaggcgggcacattcttcgtcagttcagggttcgatcgaaacgtcaacgtgttt
agtgcagacgactggtcgatgatcaagtcgttgacaggacattcggacaaggtgctcagc
gtggatatcagccacgacgcgcggtggattgccagtgccagccatgatcgaacgcggcta
tcggggatgcgacgcagaccgaaacaagccgaagccgaagccaaactcacctttgacctc
gcgagctctcctcattctttgcctatagactcttgcccactccaattcatcatgcgagga
gcagcactgtggctccggccccagaggctgatgccttctgctagaggacagctgtcacca
ctctctatgcggcccctcgcgacgtgcctgtcatgccgatacgcctacgcctccaaacag
tctgctctgctgcagcaacgacgcgcatcatccagctatcgagacagttatccggacagt
tcttcaacacgcagcagtcctcctgatatcgacaccacaaactactataccctgttccca
tcgacactcccctacggcccacctccaaactcattctttacattcaacacctcggcgctg
cggcgcgagttcctcgaactccaaggcgcaactcacccagacaagttcccgcaaggcccc
gataaacagcgcgccgagaccctgtcggcgcgcctcaacgacgcctaccgcacgctatgc
gacccgctcacgcgcgcgcagtaccttctcgcagagttccatggcatcgacgtgctcgcc
gaagacggtagcgggacatccagggccgggcttgacccagaaacgctcatggaagtgatg
gatgcgcaggagaaggtcgaggagctgtcgaacgtgccagctgccgaggccgagaaagta
gtcaagaagttgagaaatgccaatgcggatcgcattgagacgacggtggaacggctcgca
agctcgtttgatatcagcgatatagaaagggcgcacacggaaacagtgcgcttgcggttc
tggtatagtctaagggatggcctgcgcgagtgggagccgggtcatggcgagattcgcatt
gttcattga
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