Talaromyces rugulosus: TRUGW13939_03145
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Entry
TRUGW13939_03145 CDS
T06879
Name
(RefSeq) uncharacterized protein
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
trg
Talaromyces rugulosus
Brite
KEGG Orthology (KO) [BR:
trg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
trg03021
]
TRUGW13939_03145
03036 Chromosome and associated proteins [BR:
trg03036
]
TRUGW13939_03145
Transcription machinery [BR:
trg03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
TRUGW13939_03145
Chromosome and associated proteins [BR:
trg03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
TRUGW13939_03145
SLIK complex
TRUGW13939_03145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Chromo
CHD1-like_C
ResIII
HDA2-3
Cdh1_DBD_1
Motif
Other DBs
NCBI-GeneID:
55990650
NCBI-ProteinID:
XP_035342223
LinkDB
All DBs
Position
II:join(1941492..1945831,1945886..1946000)
Genome browser
AA seq
1484 aa
AA seq
DB search
MAYPATAEMSSGTQSFQPSTNGYGHMSSSEPASDRENVVLTDGDADGDMFDVSDASVNDS
EGPGENIHIAPLERGNSSDDESDLESNGQNNHSISSSSPGSGLGIKHKSPKVDEVQYMRQ
NPELYGLRRSGRPRTELRQTLADSDDDDEPKGPRSKRRRINNSQPVSKGPSRSVTRSSLT
DSDSDEYGASHARTSRRRQTQPSISHQPLEVRFSSRNATRVANYNEDSDDMFEDEAEGWT
VNDAATLHQSSGPGIDCVLNHRLNDGVDSDIAYDVVRISDCMYYIKWQDRSHYHATWETS
DNLRGFSGFRRLENYFKNKLKTDLYLNNDPDVAPEDKEKWNLDREREVESLEDYRKVDRI
IGHREGIDGDEYYVKWKRLNYDTCTWESDTLIKEIALDELDKFLDRNDKVVSCVKDEKAS
HITITGSPTFLKNGELKDFQITGLNFLAYNWARRQNVVLADEMGLGKTVQTIAFINWLRH
IRGQDGPFIVVVPLSTIPSWSETFENWTPDVNYVVYSGSSTARAILKDYELLKDGNPRKP
KFNVMLTTYEYANMDFEFLRQIPWQFMAVDEAHRLKNRESNLYANLLALKCPARLLITGT
PIQNNLAELSALMDFLNPGLVEVEVDMDLNSEAASEKLANLQRTLKPLMLRRTKDKVERD
LPPKTEKIIRVELSDIQLEYYKNILTKNYAALNEGAGGQKQSLLNIMMELKKASNHPFMF
PNAEAKLLEDVSRREDVLRTMITCSGKMMLLDQLLAKLRRDGHRVLIFSQMVKMLDLLGD
YLTFRSYPYQRLDGTISAANRRIAMEHFNAPGSADFAFLLSTRAGGLGINLMTADTVILF
DSDWNPQADLQAMARAHRIGQTKPVSVYRLVSKDTIEEEVLERARNKLMLEFITIQRGLT
EKDSLPDKHARAVGEPTGTDEISRILKRRGQRMFEQTGNQKKLEQLDIDSVLANAEEHKT
EQAEGLEADGGEEFLKSFEFVDVKVDEMSWDDIIPKEKLEEIKAEEKRKEDDRYLNEVIE
QNRPRKRNVPTDGRDEREERKAKRHARVQVNAEADGSESESDDPKRPLVEKELRHLVRAF
LRYGDLENREDDIVQEARLTGRDRETVKTALLEITTKASDLVREDRQKFADMERSGKIPT
KKEKKAVLFDLHGVKRINAHTIVERPEEMRVLRGATDGLADYKSFRIPEASKKADYTCSW
GAREDGMLCIGIVRHGYGAWPEIRDDQDLGLGDKFFLEEHRVDKKNERANTEEKGTKSPG
AVHLVRRADYLISVLRDKTSNGNNVAAKRAVENHHRNRKLSSAQRRQTSVSASPAPSNGR
KVRRDSDRRPHTNNSRDSIERSNTPRTDHVRTKTSLLNDKIRKHGANGVHEDHARPRSVS
NTAPITMEDSIFEPKVHLLVKLRDVKKNHPEKEERANEMRRLILKIGNFIKQLLRQDNYP
GLENRLWDHVAKNCFPAGKTDLNSLKNMYERVVDNNRNTTTIAR
NT seq
4455 nt
NT seq
+upstream
nt +downstream
nt
atggcgtacccggccaccgctgaaatgtcctccgggactcagtcattccagccatcgact
aatggctatggacacatgtcatcttcggaaccagcgagcgaccgagaaaacgttgttctg
actgacggcgacgctgacggcgacatgtttgatgtctccgatgccagcgttaacgatagt
gagggccctggagaaaatattcatattgcgcctttggaaagggggaactcaagcgacgat
gagtcggacctcgagagcaatggccagaacaaccactccatttcgtcgtcgtccccaggc
tctggccttggaattaaacacaagtcaccaaaggtggacgaggtccaatatatgcggcag
aacccagagctgtatgggctgcgtaggagtggccggcctcgtactgaacttcgccagacc
ctcgccgattccgatgacgacgacgaacctaaaggcccacgttccaagcgccgacgcatc
aataattcgcaaccagtctcgaagggtccctctcgatcggttaccaggtcatctctaacc
gactcggactcggatgagtatggtgcctctcacgcccgcacatcccgacgtcgtcaaacc
cagccatctatttctcatcaacctctcgaggtacgcttctccagtagaaatgctacaaga
gttgccaattacaacgaagattccgatgatatgtttgaggacgaagctgagggctggacg
gtgaatgatgccgctactcttcaccagagcagtggccctggcattgattgcgttcttaac
catcgtctcaatgacggtgtcgattcggatatcgcctacgacgttgttcgaataagcgac
tgcatgtattacataaagtggcaagatcggtcacattaccatgcaacttgggaaaccagt
gacaatctacgagggttcagtggcttccgcaggttagagaattatttcaagaacaagcta
aagactgatctttatttgaacaacgaccctgacgtcgcacctgaagataaagaaaagtgg
aacctcgatcgtgagcgcgaggttgaatcattagaggattaccgaaaagttgaccgtatt
attggtcatcgcgaagggattgacggtgatgagtactacgtcaagtggaaacgcttgaat
tacgacacgtgtacttgggaaagcgatacgcttattaaagaaattgccctggatgagctt
gacaagtttttagaccgcaacgacaaagttgttagttgcgttaaagacgagaaagcctca
cacataacgattacgggctcaccaacctttctgaaaaatggagaattgaaagactttcaa
atcacgggcctcaacttcttggcttacaactgggctcgcaggcaaaacgtagtgctcgcc
gacgaaatgggtcttggaaagaccgtccagaccattgcgttcatcaattggcttcgtcat
attcgtgggcaagatggcccattcattgtcgtcgttcccctttcaaccataccttcttgg
tcagagacatttgaaaattggacaccggatgtgaactacgtcgtctacagtggttcgagc
acggcccgcgcaattctcaaggactatgaactattaaaggacggaaatcctcggaagccc
aagttcaacgtcatgctaacaacatatgaatatgccaacatggactttgaatttcttcgc
cagataccctggcagttcatggctgtagacgaagctcaccgtctgaagaacagagagtct
aacctctatgcaaatctcctggcccttaaatgtccggctcgactcctcataacgggtact
ccgattcagaataaccttgccgagctctcggctttgatggatttcctcaatccaggactg
gtcgaagtcgaggtcgacatggatttgaattctgaagccgcatcagaaaagcttgccaac
cttcaacggactctaaaaccgctcatgctccgccgaacaaaggacaaagtagaaagagac
ctgccgccaaaaaccgaaaagatcattcgcgttgaactgtccgatatccaactcgaatat
tacaaaaacatcctgaccaaaaactatgccgccttgaacgaaggagccggtggccagaaa
cagagtctgttgaacattatgatggaattgaagaaggccagcaaccaccctttcatgttc
ccaaatgccgaagcgaagcttctcgaggatgtttcgcgtcgggaggatgttttacgcacc
atgatcacatgcagtggtaaaatgatgcttcttgatcagttattggccaaactcagacgc
gacggccatcgagttcttatttttagccaaatggtgaaaatgttggatcttttgggagac
tacttgaccttcagatcatatccataccaaaggcttgacggaactattagtgccgctaac
cgtcgtatagccatggagcatttcaatgctccagggagtgctgattttgccttccttctg
tcgacccgtgctggtggtcttgggatcaacctaatgacagctgacactgtcattctattt
gattctgattggaatccgcaggccgatcttcaagcgatggctcgcgcacatcgaattggt
caaaccaagcccgtgagcgtgtatcgactagtgtcaaaagatacaattgaagaagaagtg
ctagaacgcgcccgaaacaagctgatgctggagttcattaccattcagcgtgggctgaca
gaaaaggactctcttccagacaagcacgctcgtgctgttggcgagcccactggtacggat
gaaatatcacgcattcttaaacgacgtggacaacgcatgttcgagcaaacaggaaaccag
aagaagttggagcaacttgatatcgactcggtgctcgcgaacgcggaagaacacaagacg
gagcaagccgaagggctagaggctgatggaggcgaggaattcctgaagtcttttgaattc
gttgatgtcaaggtcgatgagatgagttgggacgatataattcccaaagaaaagctcgag
gagatcaaagccgaagaaaagcgcaaggaagatgaccgttatctcaacgaggttatcgag
cagaatcgtccacgcaaacgcaatgtcccaaccgacggccgtgacgagcgagaagagagg
aaagccaaacgtcatgcacgcgttcaagtcaacgcggaggcagatggatctgaatctgaa
tcggatgatcctaaacgtcctctggtggagaaagaacttcgccatctagtgagagctttt
ctacgatacggcgatctcgagaatcgtgaagatgatatagttcaagaagctcgccttacg
ggacgtgacagggaaactgtcaaaactgcactccttgagatcactaccaaggcatcagat
cttgtgagagaggataggcagaaatttgcagacatggagagatctggtaaaatacccacc
aaaaaggaaaagaaggccgtcttatttgaccttcacggggtcaagcgtataaatgctcat
actattgtcgagcgacccgaagaaatgcgcgtgcttcgtggggctacagacggattggct
gattacaagagtttccgtataccggaagcatcgaaaaaggcggattatacttgctcttgg
ggcgcacgtgaagacggaatgctgtgtattggtatagtgcgacatgggtatggcgcatgg
cccgaaatccgtgatgaccaggacctgggacttggtgacaaattctttttggaagaacac
cgtgtcgacaagaaaaacgaacgagcaaataccgaagagaaaggcaccaaatcaccagga
gcagtacacctagttcgtcgggcggactatctcatctcagttctacgtgataaaacttct
aatggcaataacgtcgctgcaaagagagcagtagaaaaccaccaccggaataggaaactt
agttccgcccagcgtcgacaaactagtgtttctgcatctccagctccctcgaatggccgc
aaggttcgtcgcgattccgatcggcgtccccacacaaacaattcgcgagacagcatcgag
cgttctaatactccaagaaccgaccatgtgcgaaccaaaactagccttctcaatgataag
attcgcaaacatggtgcaaatggagtgcatgaagaccacgctagaccccggagcgtcagc
aataccgcacccatcaccatggaagattccatctttgagcccaaagtccatcttctagtg
aagctccgtgacgtgaagaagaaccatcccgagaaagaggaacgagctaatgagatgcgt
cggctcatcttgaagattggcaattttatcaaacaacttctccgtcaggacaattatcct
ggtctagaaaaccgactttgggatcatgtcgcaaaaaactgcttcccagctggcaagacc
gatcttaattcactgaagaacatgtacgaaagggttgtggacaataatagaaacaccaca
accattgccagatag
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