Thermomicrobium roseum: trd_0119
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Entry
trd_0119 CDS
T00845
Name
(GenBank) putative transport system periplasmic protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
tro
Thermomicrobium roseum
Pathway
tro02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
tro00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
trd_0119
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tro02000
]
trd_0119
Transporters [BR:
tro02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
trd_0119
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
SBP_bac_11
DEC-1_N
Motif
Other DBs
NCBI-ProteinID:
ACM05069
UniProt:
B9KXD3
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All DBs
Position
complement(125806..126990)
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AA seq
394 aa
AA seq
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MADRIDALLQFLARQQRLRRRELLGGLLAAGTLAACRQAATPTPTPAPAATPTPAAQAPA
GEFAVPGYDDPNRWKGRSIVVTSWGGALQDALRKTIYQPFSRLTGCQIVEDTTDEAKLRT
MVESGTVEWDVVDVGTESVIPMGRLNLLEPLDYSKIDTTDIFPELVLEHGVGYFYYSTCL
AYRKDKFPDKPPQSWADFWDVQGFPGPRAFQKYIQWGPLEAALLADGVPIDQLYPPDVDR
AFRALDRLKPHVTVWWEAGAQPAQLLTDGEVYLTDAWIARIQFLIEQGSTVLGYTWNQGR
LSSDSLVIPRGSKNVDVAHDFINFALRPEVQRAFALAYPDGPANKRAFEALPAERVAVLP
SAPQNKALQVYPDYQWWADHLDEVVERFNSWIAR
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atggctgatcggatcgatgccctgctccagttcctggcgcgccagcagcgcctccgccgc
cgcgagctactcggtggcctcctggcagccggcacgctcgctgcctgccggcaggcggcc
actccgacaccgactccggccccagccgcgacaccgacgcctgctgcccaggcgccggcg
ggtgaattcgcggttcctggctatgacgatcccaaccgctggaagggccgcagtatcgtc
gtcacctcctggggcggcgctctgcaggatgccctgcgcaagacgatctaccagcccttc
tcgcgtctcaccggctgtcagatcgtcgaagatacgaccgacgaggccaagctgcgaacc
atggtcgagtccggcactgtcgagtgggacgtggtcgatgtcgggaccgaatcggtcatc
ccgatgggtcgcctcaacctgctggagccactcgactacagcaagatcgatacgaccgat
atctttccggaactcgtgctcgaacacggcgtcggttacttctattactcgacgtgtctc
gcctaccggaaggacaagttcccggacaagccgccccagagctgggccgatttctgggat
gtgcaaggtttccctgggccgcgtgcattccagaagtacatccagtggggaccgctcgag
gcagccctcctggccgacggagtaccgatcgaccaactctacccgccggatgtcgaccgt
gccttccgtgcactcgaccgcctcaagccacacgtgactgtctggtgggaggcgggtgcc
caaccggctcaactcctcaccgatggcgaggtctatctcaccgatgcctggatcgcccgc
atccagttcttgatcgagcaaggttccacggtcctcggttacacgtggaaccagggacgg
ctctcgagcgactcgctggtcatcccgcgcggctccaagaacgtggatgtcgcccacgac
ttcatcaacttcgccttgcgtccggaggtacagcgggccttcgcgctggcctatccggac
ggcccagccaacaagcgggcgttcgaagccttgcccgcagaacgcgtggccgtgttgccg
agtgcgccacagaacaaggcgctccaggtctatccggactatcagtggtgggccgatcac
ctcgacgaggtcgtcgagcgcttcaatagctggatcgctcgctag
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