Thermomicrobium roseum: trd_1373
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Entry
trd_1373 CDS
T00845
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
tro
Thermomicrobium roseum
Pathway
tro00550
Peptidoglycan biosynthesis
tro01100
Metabolic pathways
tro01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
tro00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
trd_1373
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
trd_1373
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tro01011
]
trd_1373
Enzymes [BR:
tro01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
trd_1373
Peptidoglycan biosynthesis and degradation proteins [BR:
tro01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
trd_1373
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
MecA_N
DUF5693
Motif
Other DBs
NCBI-ProteinID:
ACM06279
UniProt:
B9L2H2
LinkDB
All DBs
Position
complement(1364975..1367152)
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AA seq
725 aa
AA seq
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MPRATVRSSRRRSASGSLVAGLLIFAIVTGGIVAVALQFGDRQDTTTIGVADQSSASATL
TRELAAPRTAREAAERFVRAWEERDYRAMYALLSSAARQQIDEAQFIRRYEAISAEMGER
SLQVTLGEALPGTMRFPIHVVRETTRVGRLEEDNAIPIVREGDAFRIDWTPSLIVADLGD
GRVEWIPTVPQRGRLLDVKGRPLAQLGLVNKVGVVPGQIRDEHLLLERLSTLLNVPSETI
RQRYAGGQPDWFMPVATLPDPIDPGLLEQLAGIPGVVVRQWPERVYPLGPAAAHVTGYLS
EVSAEELERRAADGYEPGDRIGRAGIEAWAEDFLRGRRGGRLVIVGPDGRERRFLAEIPA
QPAADVLTTIDTDLQEAAYRALGDRVGSVVAIDPRSGAIRALVSNPSFDPNRFILGLRTD
EWQALNDEQRRPLIDRATQVGYPTGSTFKVVTMAAGLAYLGLRAESRFDCPPTFSLPGSS
VVWRDWNPRGQGQLTLHDALVQSCNTVFFQIGAQLDERDPNLLPQMARAFGFGSETGLTE
LPETAGLVPDPSWKRRERGDYWARGDAVNLSIGQGFFLATPLQLADAYAALANGGTLWQP
FLVERVVAIDGSERFHAEPKARGALPLTPEQIDTIRAALRDVVARPNGTAWSAFQGFTVS
VAGKTGTAESGQETPHAWFVAIAPAENPELVLVVMVEHGGEGSRVAAPIARQILETAQQA
GYFQR
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgccacgcgctacggtccgttcgtcgcgccggagaagcgcgtcgggatctctggtcgct
ggcctgctgatcttcgcgatcgtgaccggcggtatcgtcgcagtcgcgctccagttcggt
gaccggcaggacacgacgacgatcggggttgccgaccagagcagtgcctcagccacactg
acgcgcgagttggctgccccgcggacagcccgcgaagctgctgagcgtttcgtgcgcgcc
tgggaggagcgggactaccgcgcgatgtacgcgctcctctcgtcggctgcccgtcagcaa
atcgacgaagctcagttcattcgtcgctacgaagcgatctcggccgaaatgggcgaacgc
tcgctccaggtcacgctgggagaggcgttgcctgggaccatgcgctttccgatccacgtg
gtacgcgagacgacgcgcgtcggccgactcgaggaggataacgcgatcccgatcgttcgc
gaaggggacgcgttccggatcgattggacaccttcgctcatcgtcgccgacttgggtgac
ggccgtgtcgagtggatcccgacggttccccagcgtggccgtctcctcgacgtgaaggga
aggccgcttgcccaactgggtttggtgaacaaggtgggtgtcgttccgggacagattcgc
gacgagcaccttttgctcgagcgcttgagtactctcctcaatgtgccctccgagacgata
cggcagcggtatgctggtggacaacctgattggttcatgccggtcgcaacgctccccgat
ccgatcgatcccggtttgctcgaacagctcgccggaatccccggggtcgtggtccgtcag
tggcccgagcgcgtctatcccctcggcccggccgccgcgcacgtgaccggctatctctcg
gaggtttcagccgaggaactcgagcggcgtgcggctgacggctatgagccgggcgatcgg
atcggacgagcggggatcgaggcgtgggcggaagacttcctgcgcggccgccgcggaggg
cggttagtcatcgtcgggccggacgggagagagcgacgattcctcgccgagatcccggca
cagccggcggctgacgtgctgacgacgatcgataccgacctgcaagaggcagcgtaccga
gcgctcggtgatcgggtcgggagcgtggtggcgatcgatccgcggagcggtgccatccgg
gctttggtgagtaacccgagcttcgatcccaaccgcttcatcctcgggttgcgaaccgac
gaatggcaggcgctcaatgacgagcaacgtcgcccactgatcgaccgggcgacgcaggtg
ggatatcccaccggatcgaccttcaaggtggtgaccatggctgcaggactggcgtatctg
ggcttgcgcgccgagagcaggttcgattgcccgcccaccttcagtctgccgggaagttct
gttgtttggcgcgattggaacccgcgcgggcagggacagttgacgctgcacgatgccctg
gtccagtcctgtaacaccgtcttctttcagatcggtgcgcagctcgacgagcgcgatccc
aacctgcttccccagatggcgcgtgcgttcggtttcgggtcggaaactggactcaccgag
ttgcccgagacggccggcctggtccctgatcccagctggaagcgtcgggagcgtggggac
tactgggcgcgaggagatgcggtcaatctgtcgatcggacaaggattcttcctggcgacg
ccgctgcagttggccgatgcctatgcggcgctcgccaacgggggcacgctctggcagccg
ttcctcgtcgagcgagtcgtcgcgatcgacggcagcgagcgtttccatgccgagccgaag
gcgcgaggagcgctcccgttgacaccagagcagatcgacacgatccgagccgcattacgc
gatgtggtcgctcggccgaacgggacagcatggagtgccttccagggttttacggtttcg
gtggcaggcaagacaggtacggccgagtctggccaggagacgccgcacgcctggttcgtg
gcgatcgcgccagccgagaatccagaactcgtcctggtggtgatggtggagcacggcggg
gaagggtcgcgcgtcgcggcaccgatcgcgcggcagatcctcgaaacagcgcaacaagcc
gggtattttcagcgatag
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