Triplophysa rosa: 130554148
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Entry
130554148 CDS
T09216
Symbol
copa
Name
(RefSeq) coatomer subunit alpha
KO
K05236
coatomer subunit alpha
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tros04131
]
130554148 (copa)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tros04147
]
130554148 (copa)
Membrane trafficking [BR:
tros04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
130554148 (copa)
Exosome [BR:
tros04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
130554148 (copa)
Exosomal proteins of bladder cancer cells
130554148 (copa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
Coatomer_WDAD
WD40
ANAPC4_WD40
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
130554148
NCBI-ProteinID:
XP_057189584
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All DBs
Position
LG5:480188..491356
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AA seq
1224 aa
AA seq
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MLTKFETKSARVKGLSFHPKRPWILASLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW
NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVDTE
VRGISGVDLFGVSDAVVKHVLEGHDRGVNWAAFHPSMPLIVSGADDRQVKIWRMNESKAW
ELDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLGAH
PNLNLFAAGHDSGMLVFKLERERPAYAVYGNMLYYVKDRFLRQLDFNSSKDTAVMQLRSG
SKFPVFSMSYNPAENAVLLCTRATNLENSTYDLYSIPRESDSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSLLIKNLKNEIVKKVQVPSCEEIFYAGTGSLLLRDADGVTLFDVQQK
RSLATVKIAKVKYVVWSADANHVALLAKHAIMICNKKLESLCNIHENIRVKSGAWAENEV
FIYTTSNHIKYALTSGDHGIIRTLDLPIYVTRVRGNSVYCLDRECRPRVLNIDPTEYRFK
LALVNRKYEEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEV
ALEAAKALDERSCWERLGEAALLQGHHQVVEMCYQRTKNFDKLTFLYLITGNLAKLRKMM
KIAEIRKDMSGHYQGALYLGDVSERVRILKNCGQKSLAYLTAATHGMDEEAEALKETFDL
EKEVVPEVDPNAQLLQPPPPINPLDTNWPLLTVSKGFFEGAIAAKGKAGQMVADLDMDTS
GVEGWGEDAELHLDEDGFMDAQEGLGDEGAIGKEEGEGWDVEEDLDLPPELDVPSVGGGG
AEGEGFFVPPTKGTSPTQTWCNNSQLAVDHILAGSFETAMRLLHDQVGVVQFGPYKQIFM
QTLSRGHTCYLGLPSLPCLHSYPQRNWKDSGAKGGLPAVGLRLSDLISRLQQCYQLTTAG
RFEEAVERFRAILLSVPLLVVDNKQEIAEAQQLITICKEYIIGLTMETERKKLPKDTLDQ
QKRLCEMAAYFTHCSLQPIHMVLVLRTALNLFFKLRNFKTAAGFARRLLELGPKPEVAQQ
TRKILAACEKNLTDAHQLNYDPHNPFDICAASFVPLYRGRPVEKCPLSGACYCPKYKGEV
CRVTHVTEIGKDVIGLRVSPLQFR
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgctgaccaaatttgagacaaagtcggcccgagtgaaagggctgagttttcatcccaag
cggccctggattctcgccagtctgcacaatggagtcatccagctttgggactatcgcatg
tgtactctcattgacaagtttgacgagcacgatggtccagtcagaggtattgacttccat
aagcagcagccgctgtttgtgtcgggaggtgatgactacaagatcaaggtctggaactat
aaactgcgtcggtgtcttttcactcttttgggacatcttgactacattcgcaccaccttc
ttccaccacgagtatccctggatcctgagcgcctcagatgatcagaccatccgcatttgg
aactggcagtccagaacgtgtgtctgtgtgctgactgggcataatcactatgtgatgtgt
gctcagttccatccctctgaagacctggtggtgtcagccagcctggatcagacagtgcgc
gtgtgggatatttccggtctgaggaagaagaacctgtcccccggggctgtggacacagag
gtgcgtggcatctctggtgtcgacctgtttggggtctcagatgctgtcgtgaagcacgtt
ctggagggtcatgatcgaggggtaaactgggcagctttccatcccagcatgcctctcatt
gtatcgggagcagatgaccggcaggtgaagatctggagaatgaacgagtcaaaagcatgg
gagttggacacctgtagggggcactacaacaatgtgtcctgtgcagtgtttcaccctcgc
caggagctcatcctgtccaactctgaggacaagagcatccgcgtgtgggacatgtccaag
agaacaggcgtccagacctttcgcagagaccacgaccgtttctgggtgctgggagctcat
cccaacctcaacctgtttgctgccggtcatgacagcgggatgctggtgtttaagctggag
agagagcgtccggcctatgccgtgtacggtaacatgctgtactatgtgaaagaccgattc
ctgcgtcagctcgatttcaacagcagtaaagatacagcagtcatgcagctgcgcagcgga
tcaaaattcccggtgttcagtatgtcctataatcctgcggaaaacgccgtgttgttgtgc
accagagccactaacctggaaaacagcacatatgacctgtactccatccccagagagagt
gactcgcagaatcctgacgcgcctgagggtaaacgctcctccggcctgactgcggtgtgg
gtggccaggaaccggtttgccgtgctcgatcgcatgcattcactgctgataaagaatctg
aagaatgagatcgtgaagaaggtgcaggtgccgagctgtgaggagatcttctatgctggg
acggggtctctgttactgcgggacgctgatggagtcacgctgtttgacgtgcagcagaaa
cgctccctcgccacggtcaaaatcgccaaagttaaatatgtggtgtggagcgctgatgcc
aaccacgtggccctgctggccaaacacgccatcatgatctgcaacaaaaagttagagagc
ctgtgcaacatccatgagaacatccgagtgaagagcggtgcctgggctgagaatgaagtc
ttcatctacaccacctccaaccacatcaaatacgctctcacctcaggtgatcacggtata
attcgtacacttgacctgcccatctacgtgacgagagttcgaggcaacagtgtgtactgt
ctggatcgcgagtgcaggccacgagtgctcaacatcgatccaaccgagtaccgtttcaaa
ctggctctggtcaatcgtaaatacgaggaggttcttcatatggtgcgtaatgctaaactg
gtgggccagtccatcattgcctacctgcagaagaagggctacccagaggtcgcgcttcac
ttcgtgaaggacgagaagactcgcttcagcctggcactggagtgtggaaacatcgaggtg
gcactggaagccgcaaaagctctggatgaacgtagctgctgggagcgtctcggcgaggcg
gctcttctccagggtcatcaccaggtggtggagatgtgctaccagagaaccaagaacttc
gacaagcttaccttcctgtacctcatcactggaaacctagccaaactcaggaagatgatg
aagatagccgagataagaaaagacatgagcggacactatcagggcgctctttacctgggt
gacgtcagcgagcgtgtgcgaatcctgaagaactgcggacagaagtctctagcgtacctg
actgcggccactcatgggatggatgaagaagccgaagccctcaaagaaaccttcgacctg
gagaaggaggtggtgcctgaggtcgaccccaacgctcagttgctgcagccaccacctccc
atcaaccctctggacaccaactggcctctgctcaccgtttctaagggcttctttgaggga
gccattgctgccaaaggaaaagcaggacagatggttgccgatctggatatggatacttca
ggagttgaaggctggggagaagatgcagagcttcatttggatgaagatggattcatggat
gctcaggagggattaggagacgagggagctatcgggaaggaggaaggcgaaggctgggat
gttgaggaagatctggacctccctcctgaactggatgtgccttctgttggtggaggcgga
gctgagggagaaggattctttgtaccgcccaccaagggcacaagccccacccagacatgg
tgcaacaactctcaactggctgtggatcatattctagccggatccttcgagaccgctatg
aggttgctgcacgatcaagtcggcgtggttcagttcggaccctataagcagattttcatg
cagaccttgtcccgtggtcacacgtgttacctgggcctgccgtctctgccctgcttgcac
agttacccccagaggaactggaaggacagcggggctaaaggaggcctgccagcggtcggc
ctgcgtctgtctgacctcatttcgcgtctgcagcagtgctaccagctgaccacggcggga
cgcttcgaggaagccgtggaacgcttcagggccattctgctctcggttcctctgctcgtg
gtcgacaacaaacaagagattgcagaggcacagcagctcataaccatctgtaaagagtac
atcatcggcctcacgatggagacggagaggaagaaacttcctaaagacactctagatcag
cagaagcggctctgtgagatggcggcgtacttcacacactgcagtctgcagcccatccac
atggtgttggtgttgagaacggctctcaatcttttcttcaaactccgtaacttcaaaacg
gcagcgggattcgctcgtcgtctcctcgagctcggccccaaaccagaggtggcccaacag
acacgaaagattcttgcagcatgtgagaagaacttgacagacgctcaccaacttaactac
gacccacacaatccctttgacatctgcgcagcctcgttcgtccccttgtaccgcgggcgg
cctgtagagaagtgccccctgtccggagcctgctactgccccaaatacaaaggagaggtg
tgcagggtcacacacgtaaccgagatcggtaaagacgtcattgggttgcgcgtcagcccg
ctgcagttccgctga
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integrated database retrieval system
