Triplophysa rosa: 130554291
Help
Entry
130554291 CDS
T09216
Symbol
prpf38b
Name
(RefSeq) pre-mRNA-splicing factor 38B isoform X1
KO
K12850
pre-mRNA-splicing factor 38B
Organism
tros
Triplophysa rosa
Pathway
tros03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130554291 (prpf38b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tros03041
]
130554291 (prpf38b)
Spliceosome [BR:
tros03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
130554291 (prpf38b)
Complex C
U4/U6.U5 tri-SnRNP related factors
130554291 (prpf38b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
130554291
NCBI-ProteinID:
XP_057189804
LinkDB
All DBs
Position
LG5:complement(22081336..22086350)
Genome browser
AA seq
498 aa
AA seq
DB search
MAVSQQQQQAASKPAGGKHGNVLPLWGNEKTMNLNPMILTNVLASPYFKVQLYELKTYHE
VVDEIYFKVNHAEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFTLKLTRKQ
VMGLITHTDSPYIRALGFMYIRYTQPPPDLIDWYDEFLDDEEELDVKAGGGCMMTVGEML
RSFLTKLEWFSTLFPRIPVPVQKAIDQHMKSRPRKPPQRDEQDEEEAPDDSERHGDRRSS
RTPRKSPSPRRSQNRSRSSSHHKERRGASFDHELERERDRQRKDREGKDRDKDRDRDRER
DRERERDRQRSKSPERTAESKRSRERRRSHSASRERRNERKDREKEREGDSERSRRKDRE
HHKDRGDRERESERSKDKRGKDVDERKHKEEKEDKKHREEKRSKRSRSRSKDRKHRTERS
SKKRSRSGSRTRQEAGDERNRKRERSHSKERSHKRSRSKERSHRRESSNGRETVKQDHRR
SHSPEAGERANSVHAESP
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggcggttagtcaacagcagcagcaggccgcaagcaagccggccggtggcaaacacggc
aacgttttgccattatggggcaacgagaagacgatgaatctgaacccgatgattctgact
aacgtgctggcgtcgccgtacttcaaggtccagctgtacgagctcaagacataccacgag
gtggtggacgagatttacttcaaggtcaaccatgcggaaccatgggaaaaaggcagcagg
aagacggcaggccagacgggaatgtgcggaggggtcagaggagtcgggacgggtgggatc
gtgtccacagcgttttgtttgctgtataagctgttcacactgaaactgactcgcaaacaa
gtgatgggtctcatcacacacacagattcgccctatattagagcactaggcttcatgtac
ataaggtatacccagcctcctcctgacctgattgactggtatgatgagttcctggacgac
gaggaggagttggatgtgaaggcaggaggagggtgcatgatgacggtcggagagatgctc
cgctccttcctgaccaaactggaatggttttcaacgctgttcccacggatacccgttcct
gtgcagaaggcaatcgaccagcacatgaagagcagaccgcgtaaaccacctcaaagagac
gagcaggatgaggaggaggcaccggacgattctgaaaggcatggagatcgccgcagttcc
aggactcccaggaaaagtccaagccccaggaggtcccagaaccgttcccgaagtagcagc
caccacaaagaaagacgtggcgctagctttgaccatgaactggagagggaaagagacagg
cagcgcaaagatagagagggtaaggatcgtgataaagatagagatagggacagagaaaga
gatagggagagggaaagggacagacaacgctccaaatcacccgagcgaactgcagaaagt
aaacgcagcagggaaagacggcggagtcacagtgccagccgcgagcgaagaaatgagagg
aaggatagagagaaagagagggagggagacagtgagcgtagtcgcaggaaagacagagaa
caccacaaagatcgaggggaccgggaaagagagagtgagcggtcgaaggacaagaggggc
aaagatgtggacgagaggaagcacaaagaggaaaaggaggataagaaacacagagaagaa
aagaggagcaaacgttcgaggagcaggagcaaagacaggaagcaccggacggagcgatct
agcaagaaacgctctcgctctggcagtaggaccagacaggaagcaggagatgaaagaaac
aggaagcgggaacgcagccatagcaaggaacggtcacacaaacgcagtcgtagcaaagag
cgctcgcaccgtcgtgaatccagtaatggtcgagaaaccgtaaaacaggatcatcgccga
agccacagtcctgaagctggagagagagcaaacagtgttcatgcagaatccccgtga
DBGET
integrated database retrieval system
