Triplophysa rosa: 130554980
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Entry
130554980 CDS
T09216
Symbol
lamc1
Name
(RefSeq) laminin subunit gamma-1
KO
K05635
laminin, gamma 1
Organism
tros
Triplophysa rosa
Pathway
tros04510
Focal adhesion
tros04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
130554980 (lamc1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
130554980 (lamc1)
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Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
Laminin_B
Alanine_zipper
DUF4047
Motif
Other DBs
NCBI-GeneID:
130554980
NCBI-ProteinID:
XP_057190921
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Position
LG5:complement(3704981..3765074)
Genome browser
AA seq
1591 aa
AA seq
DB search
MVLFYLILLTLWAAGSHGAMDECIDEDNRPQRCMPEFVNAAFNVTVVATNTCGTPPEEYC
VQTGATGVTKSCHICDAGDPGLHHDAAFLTDYNNQADTTWWQSQNMLAGIQYPHSINLTL
HLGKSFDITYVRLKFYISRPHSFAIYKRTREDGPWIPFQYYSGSCEQTYSKTNRGFIRTG
EDEQQALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDNSPVLQDWVTATDIKVTLNRLN
TFGDEIFNDPKVLKSYFYAISDFAVGGRCKCNGHANQCVKNEYSKLVCDCSHNTEGADCD
VCKPFYNDRPWRRATADNTHECMPCNCNGKSAECYFNAELYRATGHGGHCINCIDNTDGP
NCERCLENYYRDASGQRCLSCSCNPVGSLSTQCDNGRCVCKPGVMGDKCDRCQPGYHTLT
EAGCRPCSCNPAGSTQECDVNTGHCRCKENVEGFSCDRCKLGYFNLDPLNPLGCTPCFCF
HHSTVCESANGYSIHKITSSFDQGDEGWKGQRRGGTSAPVRWSSSSGEISLISEDYFPIY
FVAPEKFLGDQLLSYGQNLTLNFRVQRHDARLSAEDVVLEGAGLHVAVPLIAQGNSYPEE
KMLSFVFRLHDTTDYPWRPTLKHADFQKLLNNLTAVMIRGTYSERSAGYLDNVSLTTARR
GTGTPARWVEKCTCPEGYLGQHCEQCEVGYRRSRPELGRFSSCEPCNCNGHSDTCDPVTG
MCNCRHNTAGLSCERCKDGFYGDATAGSSIDCQPCPCPAGATCAVVPKTKEAVCTNCPTG
TTGKRCELCDDGFFGDPLGEEGPVRACRACSCNNNIDPNAVGNCNRETGECLKCIYNTAG
VFCDRCKEGFYGDARAADVAGKCKPCSCSPDGTVDRQTTCFQSTGQCQCLPHVTNRDCSA
CEPGFYNIQSGKGCERCNCNSIGSTNGQCDITSGQCECQPGVTGQQCERCEVNFFAFSSS
GCKPCDCDPEGSQSAQCREDGRCECRPGFVGARCDMCEENYFYNRSVPGCQQCPNCYSLV
RDKVNQQRRKLLDLQNLIDNLDNSQETVSDKAFEDRLKEAEKRIMDLLEEAQASKEVDKG
LLDRLNDVNKTLNAQWNRLQNIRNTVDNTGAQADRARNRVREAEDLISTAREELDKAKEA
ISKVDIKIPSTSGDPNNMTLLAEEARKLADKHKADADQIEKIAKDANDTSTKAFNLLKKA
LDGENKTSSDIDELNRKYNEAKDLAKSLDKQAAKVHAEAEEAGNKALRIYANLTSLPPVD
TKSLEDEANKIKKEASDLDKLIDKTEKEYDDLREDLRGKETEVRKLLEKGKTEQQTADQL
LARADAAKALAEEAAKKGVSTFQEAQDILTDLRDFDRRVNDNKTAAEDAMRRIPEINATI
NEANEKTRRAEAALGNAANDAKEAKAKAEEAEKIANDVQKGSAKTKEDAEKAFEDTMKLD
GEVNGMMDQLAAAEKELVEKKKEADNDMMMANMASDNAKAAEEKARKAKSSVRMVLQTIN
DLLRQLGNIDKVDLSKLNQIDNALKDAKDKMAGSELDRKLKELNDVAKSQEDMISDYDRQ
IKEIRADIANLNDIKNTLPEGCFNTPSLEKP
NT seq
4776 nt
NT seq
+upstream
nt +downstream
nt
atggtacttttttacttgatattattgactttgtgggcagcgggcagtcacggagctatg
gatgaatgtatagacgaggacaatcggcctcaacgttgcatgccggagtttgttaacgcc
gctttcaacgtgaccgtggtggccaccaacacctgcggcactccgcccgaagagtactgc
gtgcagaccggggcaacgggggtcaccaaatcgtgccacatttgcgatgccggggacccc
ggactgcatcacgacgctgcgtttctcaccgactacaacaaccaagcggataccacctgg
tggcaaagccagaatatgttagcgggcatccagtaccctcactccatcaatctgaccctt
cacctgggcaagtcctttgacatcacatacgtgcgtctgaagttctacattagccgtcct
catagttttgccatctataagcgcacgagagaggacgggccctggattcccttccagtat
tacagcggctcctgcgaacagacctacagcaagaccaaccgtggcttcatccgcacgggc
gaggacgagcagcaggctctgtgtacggatgagttcagcgatatctcacccctcaccgga
ggaaacgtggccttctccacactcgagggccgacccagtgcatacaactttgacaacagc
cccgtactacaggattgggtgactgccacagacatcaaggtgaccctgaacagattaaac
actttcggcgatgaaatcttcaacgatcccaaagttctcaagtcctacttctatgctatc
tcagacttcgctgtgggaggaaggtgcaagtgtaacggtcatgccaaccagtgtgtgaag
aacgagtacagcaaactggtgtgtgactgcagtcacaatacagagggggcggactgtgac
gtgtgcaagcccttctacaatgaccggccctggaggagagccacggccgacaacacccac
gagtgcatgccctgtaactgtaacggcaagagtgccgaatgttacttcaatgcagagctg
tatcgtgccacgggtcacggaggtcactgcatcaactgcatagacaacacagacgggccc
aactgcgagagatgcctggaaaactattacagagacgcatccggtcagcgctgtctgtcc
tgcagctgcaaccctgtcggttctctcagtactcagtgtgataacggccggtgtgtgtgt
aagcctggagtgatgggagacaagtgtgacagatgccagcccgggtaccacacgctgact
gaagcaggctgcagaccgtgctcttgtaatcctgccggaagcacgcaagagtgtgatgtc
aacacgggacactgccgatgcaaggagaacgtggaaggcttcagctgtgacaggtgtaaa
ctgggctactttaatctggaccccctgaatcctttgggttgcaccccatgtttctgtttc
catcactccactgtgtgtgagagcgccaatggttacagcatacacaaaatcacttccagc
ttcgaccaaggtgatgaaggttggaagggacagaggagaggtggcaccagcgcacctgtg
cggtggtcttccagctctggcgagatctcgctcatctctgaagactactttcccatctac
tttgtggctccagagaaatttcttggcgatcagttgctgagttatggtcagaacctcacg
ctaaacttcagggtccagcgacacgatgcacggctgtcagccgaggatgtcgtactggaa
ggggcggggcttcatgttgccgtgccgcttattgctcagggcaattcctatccagaagaa
aagatgctgtcatttgtgttcagacttcacgacaccactgactacccatggagacccacc
ttaaagcatgccgacttccagaaacttctgaacaatctgaccgccgtcatgattcgtgga
acctacagtgagagaagtgctggttatttggacaacgtgtccctcacaacagcccgccgt
ggtactgggaccccagctcgatgggttgagaagtgcacgtgtcctgaggggtatctggga
caacactgtgagcagtgtgaggtgggatacaggaggagccgccccgagctgggccgcttc
agcagctgtgagccctgcaactgtaacgggcacagcgacacatgcgaccccgtgacaggc
atgtgtaactgcaggcacaacacggcaggactgagctgtgagaggtgtaaggatggtttc
tatggtgacgcaacagcgggctcctctatagactgtcagccctgtccctgccccgcaggt
gccacatgtgctgtggtgcccaaaactaaagaggcggtctgtactaactgcccgactggc
acaacaggtaagcgttgtgaactttgtgacgatggcttcttcggcgacccgctgggcgag
gaaggtccggtcagggcgtgccgggcgtgtagctgcaataacaacatcgaccccaacgct
gtgggaaactgtaaccgagagacgggcgaatgcctcaagtgtatctacaacaccgccggc
gtcttctgcgaccgctgcaaagagggtttctatggtgacgcccgtgccgccgatgtagct
ggcaagtgtaaaccatgttcttgctctccggacggtacggtggacagacagactacctgc
tttcagagcacaggtcaatgtcagtgtcttcctcacgtcactaacagagactgcagcgcg
tgtgaacccggcttctacaacatacagagcggcaaaggctgtgaacggtgcaactgcaac
tctattggttccacgaacggtcagtgtgacatcactagtggtcagtgtgaatgtcagcct
ggggtcacaggtcaacagtgtgagcgctgtgaggtcaactttttcgccttcagttcctca
ggatgcaaaccttgtgactgtgatccggaaggttctcagtcggctcagtgcagagaggac
gggcgttgtgagtgtcgtccaggttttgtgggagctcgctgtgacatgtgcgaggagaat
tacttctacaaccgctctgtgcccggctgccagcagtgtcccaactgttacagtctggtc
cgagataaggtgaaccagcagagacggaagctccttgacctgcagaatctgatcgataat
ctggataacagtcaggaaacagtgagcgacaaggcctttgaggacagactgaaggaggca
gagaaaaggatcatggatctgttggaagaggcgcaggctagcaaagaagtggacaaaggc
cttttggatcgtctaaacgacgtcaacaagacgttgaacgctcagtggaacagactgcag
aacatcaggaacactgtggacaacacaggagctcaggcggacagagctcgtaaccgagtc
cgtgaagcagaagatctgatcagcaccgctagagaggagctggataaagccaaagaggcc
atcagcaaagtggacatcaaaataccctcaacgtctggagatccaaacaacatgactctc
ttggccgaggaagcccgtaaattggcagacaaacataaagccgacgcagatcagatcgag
aagatcgcaaaagacgccaatgacacgtctaccaaagcgtttaacctgctgaagaaggcg
ctggatggagagaataagacgagcagcgacattgatgagctcaacaggaagtataatgag
gcaaaggacctggccaagagtctggataaacaagctgccaaagttcacgctgaagcagag
gaggctgggaacaaagctctgaggatctacgctaacctgaccagtctgcctccagtcgac
actaaatcgttagaggacgaagccaataagattaagaaagaggcgtcggacctggacaaa
ctgattgataaaactgagaaagagtacgacgaccttagggaagatctgaggggcaaggag
acggaggtccggaaactgctggagaaaggaaagacagagcaacagacggctgatcagttg
ttggcgcgtgcagacgcagctaaagctctggcggaggaggcggcaaaaaaaggcgtatct
actttccaagaggcccaggacatactgaccgacctcagagatttcgacaggagagtgaat
gacaacaagaccgctgccgaggacgccatgagacgcatcccagaaatcaacgcgacaatc
aacgaagccaacgagaagacccgacgggccgaggcggctctgggcaacgcggcaaacgat
gctaaagaggcgaaagcgaaggcagaggaagccgagaaaatcgccaatgacgtgcagaag
ggttccgcgaagacgaaggaagatgcagaaaaagctttcgaggacaccatgaaactggac
ggtgaggtgaacggcatgatggatcagctcgcggctgccgagaaagagctcgtggagaag
aaaaaagaggccgataacgacatgatgatggcaaacatggcgtcggataacgctaaagca
gctgaggagaaagcccgtaaagccaaaagctccgtcaggatggtgctacagacgatcaac
gacttgctaagacagctgggcaacatcgataaggtcgatctgagtaagctgaatcagatt
gataacgctctgaaagacgccaaggacaagatggcaggaagcgagctggacaggaagttg
aaggagctgaacgacgtagccaagagccaggaggacatgatcagcgactacgatcgccag
atcaaggagatccgagcggacatcgccaacctcaacgacatcaaaaacactctgccggaa
ggctgcttcaacactccctctctagagaagccttaa
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