Triplophysa rosa: 130555861
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Entry
130555861 CDS
T09216
Symbol
hdac4
Name
(RefSeq) histone deacetylase 4 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
tros
Triplophysa rosa
Pathway
tros04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
130555861 (hdac4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tros03036
]
130555861 (hdac4)
Enzymes [BR:
tros01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
130555861 (hdac4)
Chromosome and associated proteins [BR:
tros03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
130555861 (hdac4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
130555861
NCBI-ProteinID:
XP_057192369
LinkDB
All DBs
Position
LG6:3477320..3640264
Genome browser
AA seq
1044 aa
AA seq
DB search
MTSPSRPDSSKDQPLELLKSSEFNHIPAVDVSAALPLHLPPSAIPMDLRVDHQLALAPPD
RCEQQLQQELLILKQKQQIQRQRLIEEFQRQHEQLSRQHEVQLQEHVKHQQDLLALKHQQ
ELLEHQRKLERHRQEQELEKHQREQKLLLLKNKERGQESAVASTEVKMRLQEFVLNKKKA
LAQRSLNHCLPSDLRYWYGKTQHSSLDQSSPPQTGISTYNHPLLGMYDPKDDFPLRKTAS
EPNLKLRSRLKQKVTERRSSPLLRRKDCPITSAKKRSLDMAESACSSAPGSGPSSPNNSS
NNITNENGIAGSISHSPVEASLAHRLAGREGPVSQLSLYTSPSLPNITLGLPATGPSSVA
SGQQDGDRLAVPGLQPGMHITTPFLPGAHLPYLAASSLEREGSSAHNTLLQHMVQSATQN
PLVTGLGSMPLQSHPIHKLRQHRPLGRTQSAPLPQNFQALQQLVVQQQHQQFLEKHKQQF
QQQQLHISKMMAKPSEPGRQHESHPEETEEELREHQGLADPTEGLPHGVTIKQEPPDEPG
EEFQHRERPAEEEMLFRQQALLLEQQRIHQLRNYQASMEAAGLSVTFPGHRPLSRAQSSP
ASATFPIAVQEPPVKPRFTTGLVYDTLMQKHQCMCGNSNIHPEHAGRIQSIWSRLQETGL
RGQCECIRGRKATLEELQTVHTEAHVMLYGTNPLRQKLDSSLTPMFVRLPCGGIGVDSDT
IWNEVHSSSAARLAVGSVVDLVFKVASGELRNGFAVVRPPGHHAEESTPMGFCYFNSVAI
AAKLLQQRLNVSKILIVDWDVHHGNGTQQAFYSDPNVLYVSLHRYDDGNFFPGSGAPDEV
GAGPGVGFNVNMAFTGGLEPPMGDADYLAAFRTVVMPIANEFAPDVVLVSSGFDAVEGHL
PPLGGYKLTAKCFGYLTKQLMGLAGGRLVLALEGGHDLTAICDASEACVSALLGNELDPL
PEEVLQQRPNSNAVQSMEKVLEVHSKYWRSLQRSASTLGYSLLEAQRCETDEAETVTAMA
SLSVANKHMGKRTEEEPMEEEPPL
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgacgtctcccagccggccagattccagtaaagaccagccactggagcttctgaagtca
tctgaattcaaccacattcctgctgttgatgtgagtgccgcactgccactgcacttaccc
ccatctgccatccccatggatctgcgtgtggatcatcagttggccctggcgcccccggat
cgctgcgagcagcagcttcaacaggaactgctgatcctcaaacagaagcagcagatacag
cggcagcggctcatcgaggagttccagcgtcaacacgagcagctctctcgacagcacgag
gtgcagctgcaggagcatgtcaagcatcaacaggacctcctggccctgaaacatcagcag
gagctgttggagcaccagaggaagttggagcgtcatcgtcaggaacaagagctggagaaa
caccagcgagagcaaaagcttctgttactcaagaataaagaacgcggccaggagagcgcg
gtggcgagcacggaggtgaagatgaggttacaggagtttgtcctgaataagaagaaagct
ctggcacagaggagtctgaaccactgcctgcccagcgacctgcgatactggtatgggaaa
acccagcacagctcccttgaccagagctcgccacctcaaacagggatttccacttacaac
cacccgttgctgggaatgtacgaccccaaagatgacttcccgctccgcaagacagcttct
gagcccaacctgaagctacgatccagactgaagcagaaagtgacagaacgcaggagtagc
ccgctgctgcggaggaaggactgccccatcacctctgctaagaaacgctcacttgacatg
gctgaatcggcgtgcagcagtgctcctggttctggtcccagttcacccaacaacagttca
aacaacatcaccaatgagaacggcatcgctggatccatctcccacagtccagtggaggca
tctttggcacacagactcgcgggcagagagggtcctgttagccagctgtctctttacaca
tcaccatcccttcccaacatcactctgggcctgccagccaccggcccttccagcgtggca
tcaggccagcaggatggtgacaggctggcagtgccaggcttgcagccaggaatgcacata
accactccgttcttgccaggggcccacctgccttacctggccgcctcctccttagagcga
gagggcagctctgcacacaacactcttctccagcatatggtgcagtcagccacacagaac
ccactcgtcacaggcctggggagcatgcccctgcagtcacatcccatccacaagcttcga
cagcatcggcccctgggacgcacgcagtcggctcctctgcctcagaactttcaggctctg
cagcagctggtggttcaacagcagcaccagcagttcctcgagaaacacaagcaacagttc
caacagcagcaacttcacatcagcaagatgatggctaagccgagcgagccgggccgacag
cacgagagtcacccggaggagacggaagaagaactgagggaacatcaggggctggccgac
ccgacagagggtcttccccacggggtcaccatcaaacaagaacctccggacgaaccgggt
gaagaattccagcatagagagaggccggctgaggaagagatgctcttcaggcagcaagct
ctactcttggagcaacagaggatccatcagttgaggaactatcaggcatccatggaggcg
gccgggctctctgtgacgttcccagggcatcgacctctgtccagagcacaatcatctcca
gcctcagccacctttcccatagctgttcaggaaccgcccgtaaaaccacgcttcaccacc
ggtctggtgtacgacacgctgatgcagaagcaccagtgcatgtgtggaaacagtaacatt
caccccgagcacgccggccgcatccagagcatctggtcacgcctgcaggagacaggactg
cgcggtcaatgcgagtgtattcgaggcagaaaagccactttggaggagctgcagacggtc
cacaccgaggctcacgtgatgctgtacggcaccaacccgctccgacagaaactggacagt
tcgttgacacccatgttcgtgagactgccgtgcggcggaatcggggttgacagtgacact
atctggaatgaagtgcactcctccagcgctgctcgtctggccgtgggctccgtggtggat
ctggtgtttaaggtggcgtcaggagagctgaggaatggctttgctgtggtgcgacctcca
ggacaccacgccgaggaaagcactccaatgggattttgctacttcaactcggtcgccatt
gcagctaaactcctgcagcagaggctgaacgtcagtaagattctgattgtcgactgggat
gttcaccatggcaacgggacccaacaggccttctacagtgaccctaatgtcctgtatgtg
tctcttcatcgctacgacgacgggaacttctttcctggaagtggagcacctgatgaggtg
ggcgccggtccaggtgtgggttttaatgtgaatatggctttcactggaggtctggagccg
cccatgggggacgcggattatctggcagcattcaggacggtggtgatgccaatagccaac
gagttcgctccagacgtggtgctggtttcttcgggctttgatgctgtggaggggcatctg
ccaccactaggaggatacaaactaacggccaaatgttttggctacctgaccaagcagctg
atgggactggccggcggtcggctggtgctcgccctggagggaggtcacgacctcacggcc
atttgcgatgcgtctgaagcatgcgtttctgctttgcttggaaacgagctggaccctctc
ccagaagaagtgctacaacagaggccgaactccaacgctgttcagtccatggagaaagtg
ctggaagttcacagtaaatactggcgctcactgcagcgctctgcatccactctgggctac
tcgttgctggaggcgcagcgttgtgagaccgacgaggcggagaccgtgaccgccatggcc
tccctgtccgtggccaacaagcacatgggaaagaggacagaggaggagcctatggaagaa
gaacctccattgtag
DBGET
integrated database retrieval system
