KEGG   Triplophysa rosa: 130559545
Entry
130559545         CDS       T09216                                 
Symbol
col13a1
Name
(RefSeq) collagen alpha-1(XIII) chain
  KO
K16617  collagen type XIII alpha
Organism
tros  Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:tros00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:tros00536]
    130559545 (col13a1)
Glycosaminoglycan binding proteins [BR:tros00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   130559545 (col13a1)
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 130559545
NCBI-ProteinID: XP_057198674
LinkDB
Position
LG9:9356495..9404424
AA seq 641 aa
MGIPGRMGIKGNSGEKGAPGEPGLSIIGPRGPPGQPGTRGFPGFPGPIGLDGKPGQNGPK
GDMGARGPKGVPGEPGPKGEKGVCGDYTHRQMLPITVRNMPSISPLILKRLKQGETGAQG
PPGPPGPPGSPGPTGTSGPPGKPGEPGKPGKDPRMLPGLKGEPGVSGQKGDRGEAGPSGP
EGPKGHKGDHGLKGGQGLAGQTGEKGDKGDLGMPGKQGVKGEPGFPGIPGQKGQAGFSGI
PGKRGYKGEKAEPSAAGSGIKGEPGAPGLPGPKGEKGDYGIKGEPGLEGPSGPRGPPGPT
GEPGKTLINENDIRNVHSMGPPGLPGPPGPAGTPGLKGDIGLPGAPGHDGEKGPRGKPGE
PGPIGPPGLEGPRGEGGVMGFSGPKGDKGDMGPSGSPGLDGPTGERGLSGPPGPIGLPGP
MGQKGEPGEKGDKAELVYGPAGPPGPAGPVGPLGPSGLSGPKGEPGVGLRGDKGSPGQKG
DKGDRGHLGLPGAHGLDGKPGPVGLIGPAGVSGPAGPKGEMGEKGDMGVAGPIGPQGIPG
LVGPPGLKGNRVFLSPFPPPAPWPVSRGSVCRVGPGRPLCTPLTPGLLLLLLHPNVLAWG
ERGKKGNRGAKGDKGDQGAPGLDAPCPLGDDGLPVPGCWNK
NT seq 1926 nt   +upstreamnt  +downstreamnt
atgggcattcctggaagaatgggcataaaggggaactctggggagaagggagcaccaggg
gagccgggtctgtctatcattggcccaagaggacctcctggacagcctggcactagagga
tttccaggttttccgggtcccattggcttagacgggaaacctggacagaatggtccaaag
ggagatatgggtgctcgtggtcctaaaggagttccaggtgaacctggtccaaaaggagag
aagggtgtgtgtggtgactatactcacaggcagatgttgcccatcaccgttcgcaacatg
ccctcaataagccctctaatcctaaagcgcctcaagcagggcgagaccggagcacaggga
ccaccggggcctcctggccccccaggaagtcctggacctacaggcactagtggaccccct
ggtaaacctggagaacccggcaaacctggaaaggacccaaggatgctaccagggctgaag
ggtgagcctggtgtctctggacaaaagggtgatcgtggtgaggcgggtccaagtggacct
gaaggccccaagggtcataaaggagatcatggcctaaagggagggcaaggactggctggg
caaacaggagaaaaaggagacaagggtgatctaggaatgcctgggaaacaaggagtgaag
ggagagcctggttttccgggcatccctggtcaaaagggtcaggcgggtttttctggtatc
cctgggaaacggggttacaagggagagaaagctgaacccagtgctgcaggaagtggcatc
aaaggagaaccaggtgccccaggactgcctggacccaagggtgagaaaggagattatggc
ataaagggtgaacctggtctggaaggtccctctggaccaaggggtccaccaggtcctaca
ggcgagccaggaaagactttgatcaatgagaatgatattcgtaatgtgcattcaatgggc
cctcctggtctaccaggacctccagggcctgctggcactccaggcttgaagggtgatatt
ggactgccaggtgcccctggtcatgatggcgaaaagggtccacgaggaaagccaggagaa
ccaggacccattggcccacctggactagaggggccacgaggagagggaggagttatgggc
ttctctggaccaaaaggagacaagggggacatgggcccttctggatcacccggtttagat
ggccctacaggagaaagggggctttcagggccccctggtcccattggattgccaggccca
atgggtcagaaaggtgaacctggagagaaaggagacaaagcagagctggtttacgggcct
gctgggcctccaggacctgctgggccagttgggccgttgggaccttcaggtttgtcagga
ccaaagggagagccaggagttggtttgagaggagacaaggggtcacctggacaaaaggga
gataaaggagacagaggccatcttggactccctggggctcatggtttagacggcaagcct
ggtccagtgggtctgataggaccagctggggtttctgggcctgcaggaccaaaaggagaa
atgggggaaaagggagatatgggagtagcaggaccaattgggcctcaaggcatccctggt
ttagtaggaccaccgggattaaaaggaaaccgggtcttcttatccccttttcctccccct
gcaccctggcctgtgtcccgtggctctgtttgccgagtcgggccgggtcgtcctctctgt
acccctctcacccctggccttctcctgctcctcctgcatcctaatgttttagcctggggg
gagaggggcaagaagggcaacaggggggccaaaggggataagggagaccagggagcccca
ggattagatgccccgtgtccgttgggtgatgatggtctgccagtaccagggtgttggaat
aaatga

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