Triplophysa rosa: 130562106
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Entry
130562106 CDS
T09216
Symbol
rnps1
Name
(RefSeq) RNA-binding protein with serine-rich domain 1
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
tros
Triplophysa rosa
Pathway
tros03013
Nucleocytoplasmic transport
tros03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130562106 (rnps1)
03015 mRNA surveillance pathway
130562106 (rnps1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tros03019
]
130562106 (rnps1)
Messenger RNA biogenesis [BR:
tros03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
130562106 (rnps1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_occluded
RRM_7
Nup35_RRM_2
RRM_5
KdpD
Motif
Other DBs
NCBI-GeneID:
130562106
NCBI-ProteinID:
XP_057202926
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All DBs
Position
LG11:complement(2672625..2675290)
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AA seq
307 aa
AA seq
DB search
MRELIKARRSLISPLRVLRACSFIMAPSPTKRRERSEDKPRERAKEKPAGKEGAEKERGR
EKIRKRRSNSTGSSSSRSSSSSSSSSGSSSGSSSGSSSSSGTSRSGSSSSSRSSSSSGSS
GSPSPSRRRHDNRRRSRSKSKSQKRGEEKERKRRSPSPKPTKLHLGRLTRNVTKEHIQEI
FSTYGKIKMIDMPPDRLHPNLSKGYAYVEYESPEDAQKALKHMDGGQIDGQEITASAVLT
QRIRTAPRRMTPPRRMPPPPPMWRRTPPRMRRRSRSPRRRSPVRRRTRSRSPGRRRHRSR
SSSNSSR
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagctcattaaagcgcgacggtccctgatctcgccgttgagagtgttgcgcgct
tgttcattcatcatggcaccttcacccaccaaacgcagagaacgttctgaggacaaaccc
agagagagagcgaaagagaaacccgctggaaaggagggagcggagaaggagagaggcaga
gagaagatccgcaagcgtcgcagtaactccactggcagcagtagtagcaggtccagttcc
agctccagcagcagttctgggtccagctcgggctcatccagtgggtccagctcttcctct
ggtaccagccgttctggttcatccagttcctcccggtcctctagctcatccggatcctct
gggtctcccagcccgagccgtcgtcgccatgacaaccggcggcgctcacgatcaaagtcc
aaatcacaaaagcgcggtgaggagaaagagaggaagaggaggagccccagccctaaacca
actaaacttcatctgggaagactcaccaggaatgtcaccaaggaacacattcaagagatc
ttctcgacttacgggaagatcaagatgatcgacatgcctccggaccgcttgcatcctaat
ttatcaaagggctacgcttatgtggaatacgagtctccagaggatgcccagaaggccctg
aaacacatggatggaggtcagattgacggtcaggagatcacggcctctgctgttctcacc
cagaggatacgaaccgccccgcgaagaatgacgccgccacgcagaatgcctcccccacct
cccatgtggcgccgcacgccacctcgcatgaggagacgatctcggtctccacggcgacgc
tccccggtgagaaggcgcactcgctccaggtctccgggtcgcagacgacaccgctctcgc
tccagttccaactcgtcccgttag
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