Trichoderma reesei RUT C-30: M419DRAFT_71506
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Entry
M419DRAFT_71506 CDS
T06031
Name
(GenBank) SNF2-family ATP dependent chromatin remodeling factor snf21
KO
K11786
ATP-dependent helicase STH1/SNF2 [EC:5.6.2.-]
Organism
trr
Trichoderma reesei RUT C-30
Brite
KEGG Orthology (KO) [BR:
trr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
trr03021
]
M419DRAFT_71506
03036 Chromosome and associated proteins [BR:
trr03036
]
M419DRAFT_71506
Transcription machinery [BR:
trr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SWI/SNF complex
M419DRAFT_71506
RSC complex
M419DRAFT_71506
Chromosome and associated proteins [BR:
trr03036
]
Eukaryotic type
Chromatin remodeling factors
RSC complex
M419DRAFT_71506
SWI/SNF complex
M419DRAFT_71506
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
Bromodomain
SnAC
QLQ
ResIII
DEAD
HDA2-3
RBR
Motif
Other DBs
NCBI-ProteinID:
ETS05703
JGI:
TrireRUTC30_1_71506
UniProt:
A0A024SL80
LinkDB
All DBs
Position
Unknown
AA seq
1433 aa
AA seq
DB search
MASVQMPGAVQMPGAPMPAGATKQQAEEVFRKLKQMKEQGVPPTDPEYIKASQFLMSFQQ
QHNMRRNQAQYIQAQQQMQQNAQNAQNSAAHAPNGSLNGVQPSHPQQNMPQTTQAALPNA
AGATTATPTLNGPAAAAPSVPTPSGSSSSSSHFTQKQLALLRQQIHAFKLLGKNAGISTQ
LQQAIFQQRLQRQAAITASAQAPAPAKTPQPGSDAGKSTPNGVESAPQDDALALPKAHTY
KTVKSPYGTGMIRPSIKYFDHAQRKNRWFIPGVFPTGIDFDHLRYEREVVVFNRMSQRYS
ELKNLPANIAHWDTTKEDVEVDDSVKVKAVIEMKSLALYAKQRALREKIARQMMHYDNLA
MTTNRSNYRRMKKQNVREARITEKLEKQQRDARENREKKKHSDFLRAIHNHRAEIIENAV
AQKNKSHKLSRLMYSHHFNIEKEEQKRIERTAKQRLQALKANDEEAYLKLLDQAKDTRIT
HLLKQTDGFLHQLASSVKAQQRQAAETYGTDAGTFVDEESELDEEDSGKKIDYYAVAHRI
REEVTKQASILVGGTLKEYQIKGLQWMISLYNNNLNGILADEMGLGKTIQTISLITYLIE
QKQQSGPYLVIVPLSTLTNWNLEFEKWAPSVARVVYKGPPNTRKLQQEKIRQGRFQVLLT
TYEYIIKDRPILSKIKWFHMIIDEGHRMKNTQSKLSATIQQYYTTRFRLILTGTPLQNNL
SELWAMLNFVLPNIFKSVKTFDEWFNTPFANTGGQDKMELTEEEQILVIRRLHKVLRPFL
LRRLKKDVEKDLPDKTEKVIKCKFSALQSKLYKQMVTHNKLVVSDGKGGKTGARGLSNMI
MQLRKLCNHPFVFDIVENVMNPLNISNDLLWRTAGKFELLDRILPKYKATGHRVLMFFQM
TAIMDIMEDYLRYRNYKYLRLDGTTKSDERSDLLRDFNAPNSEYFLFLLSTRAGGLGLNL
QTADTVIIYDSDWNPHQDLQAQDRAHRIGQKNEVRILRLISSNSVEEKILERARFKLDMD
GKVIQAGRFDNKSSETDRDAMLRTLLETADMAESGEQEEMEDEELNLLLARNDEELVTFQ
KLDEERQKDPIYGGPKGKPRLMAEDELPEIYLNEGNPISDDAEEVILGRGARERTKVKYD
DGLTEEQWLMAVDDDEDSPEAAAARKQARKDKREANKLRKSLLANSMDNSPSASRASTEE
VETPKKRGRKPGSKVEKRKAEEDDEQPPPKKRRGPQGRPSKNAAREDSRVPPQHREVLQK
SLRALYDGLMNLEVDDIEPPAEDDESDAGKRLIIGPFVKLPPKRDYADYYVIIQNPICMN
HIHTRIKKEEYNCLSDLRKDFELLIRNCQTYNEDGSILYQDAKTMEEFFNQKYQEELDAH
PELLELEEGGKAGSAAPSGNGNTPQPSGTRIKIISSAAREANGARSAAQSDED
NT seq
4302 nt
NT seq
+upstream
nt +downstream
nt
atggcatcagtgcagatgccgggcgcggtccagatgccgggcgcgccaatgcctgccggc
gcgaccaagcaacaggccgaagaggtctttcggaaactcaaacaaatgaaggaacaaggc
gttccgcccactgatcccgagtacatcaaggcttcccagttcttgatgagtttccaacag
caacacaacatgcgacgaaaccaggcacagtacatccaagcccagcaacagatgcaacag
aatgcgcagaacgctcagaacagcgctgctcatgcccccaatggcagcctcaacggcgtt
cagcccagccatccgcaacagaacatgccccagacgacgcaggccgccctgcccaacgcc
gccggagcgacgactgcgacgcctactctgaatggccctgctgccgctgctcccagcgtc
cctacgccgtcaggctcgagctcgtcatcgagtcacttcacccaaaagcaacttgccttg
ctgaggcagcagatccatgccttcaagctcctcggcaagaatgccggcatctccacgcag
cttcagcaggccatcttccagcagcgcctgcagcgccaggccgccatcacagcctctgct
caagctcctgccccggcaaagactccccagcccggctccgatgctggaaagtctacccca
aacggcgttgagtctgcccctcaagacgatgcgcttgcgcttcccaaggcccatacctat
aagactgtcaaatcaccatacggcactggcatgatccgaccgtctatcaagtatttcgac
catgcgcagaggaagaaccgatggttcatccccggcgtcttcccgacgggcatcgatttc
gaccacctgcgatatgagcgagaagtcgtcgtcttcaaccgcatgagccagcggtactcg
gagctgaagaacttgcccgccaacattgcccactgggacactaccaaggaggatgtcgag
gtcgacgattccgtcaaggtcaaggccgtcatcgagatgaagagcctggccctctacgcc
aagcagcgggcccttcgcgagaagattgctcgccagatgatgcactatgacaacctggca
atgacaaccaaccggtcaaactaccgccgcatgaagaagcagaatgtccgcgaggctcgc
attaccgagaagctcgagaagcagcagcgtgatgcccgcgaaaaccgcgaaaagaagaag
cactctgacttcctccgagccatccacaaccaccgcgccgagatcattgagaacgcggtc
gcgcagaagaacaagtcgcacaagcttagcagactcatgtactcgcatcacttcaacatc
gagaaggaagaacagaagcgcatcgagaggacggccaagcagcgtctgcaggccctcaag
gctaacgacgaggaggcctatctcaagctgctcgaccaggccaaggacactcgtatcaca
cacctgctcaagcaaaccgatggcttcttgcaccagctggcgtcatcggtcaaggcccaa
cagcggcaagcggccgagacctacggcaccgacgcgggcacctttgtcgacgaagagagc
gagcttgacgaagaagacagcgggaagaagattgactactacgccgtcgctcaccgcatt
cgtgaagaggttaccaagcaggctagcatcctggttggaggcacgttgaaggagtaccaa
atcaagggtctccagtggatgatctccctatacaacaacaacctcaatggtatcctcgca
gatgaaatgggtctcggaaagacgatccagaccatcagtctgattacctacctgatcgag
cagaagcagcagagcggcccgtacctggtgattgtgccgctgagtacccttaccaactgg
aacctcgagttcgagaagtgggccccgtccgtggcccgcgtcgtgtacaagggtcctccc
aacacccgcaagctgcagcaggagaagattcgccagggacggttccaggtgctgctgacg
acgtacgagtacatcatcaaggatcgaccgattctcagcaagatcaagtggttccacatg
atcatcgacgaaggtcaccgtatgaagaacacgcagtccaagctcagcgcaaccattcag
cagtactacaccacgcgcttccgtctcattctcacgggtactcccctccagaacaacctg
tccgagctgtgggccatgctcaactttgtcctgccaaacatcttcaagtcggtcaagaca
tttgacgagtggttcaacactccctttgccaacaccggtggccaggacaagatggagctc
acggaagaagagcagatcctcgtcattcgacgcctgcacaaggtcctgcgacccttcctg
ctgcgtcgtctgaagaaggacgtcgagaaggacttgcccgacaagacggaaaaggtcatc
aagtgcaagttctcggcactgcagtccaagctctacaagcagatggtgacgcacaacaag
ctggttgtcagcgacggcaagggtggcaagactggtgctcgcggcttgagcaacatgatt
atgcagctgcgaaagctttgcaaccacccgtttgtgtttgacattgtcgaaaacgtcatg
aaccctctcaacatcagcaacgacctgctctggagaacggcgggcaagttcgagctgctg
gaccggattctgccaaagtacaaggcaaccggccatcgcgtgctgatgttcttccagatg
acggccattatggacattatggaggactatctccgttaccgcaactacaagtatctgcgt
ctagatggtacaaccaagtccgatgagcgatccgacctcctccgggacttcaacgcgccc
aactcagaatacttcttgttcttgctgtccacccgtgccggtggtttgggtctgaacttg
caaacggccgacacggtcatcatctacgactctgactggaatccccaccaggatttgcag
gcccaggatcgtgcccaccgtatcggccagaagaacgaggtgcgaattctgcgtcttatc
agctccaactcggtcgaggagaagatcctggagcgcgccagattcaagctggacatggac
ggcaaagtcattcaggcaggtcgttttgacaacaagtcctccgagacggaccgtgatgcc
atgcttcgaactctgctggaaactgccgacatggccgagtctggcgagcaagaagaaatg
gaggacgaggaactcaacctgttgcttgcccgtaacgacgaagagcttgtcacattccaa
aagttggacgaagagagacaaaaggatcccatctatggcggtcccaagggcaagcctcga
ctgatggccgaagacgaattgcccgaaatctatctcaacgaaggcaaccccatctcggac
gatgccgaagaggtcattcttggtcgtggcgctcgcgagcgtaccaaggtcaagtacgac
gatggcctgacggaagaacagtggttgatggccgtggatgacgatgaggatagtccagag
gcggccgcggcgcgtaaacaggcccgcaaagacaagagagaggccaacaagctcagaaag
tcactgctggcaaattccatggacaattcgccatcagccagcagggcgagcacggaggag
gttgagacgccaaagaagagaggccgcaagcctggcagcaaggtcgagaagcgaaaggca
gaagaggatgacgagcagcctcctcccaagaagcgacgcgggcctcagggacgccccagc
aagaacgccgcccgtgaagattctcgcgtgccacctcaacatcgggaggtgcttcaaaag
agcctgcgagcactctacgacggtctgatgaacttggaagtggacgatatcgagcctccg
gcagaggacgacgaatctgatgctggcaagcgactcatcatcggaccctttgtcaagctc
cccccgaagcgcgattatgccgactactacgtgatcatccaaaaccccatctgcatgaac
cacattcacacgcggatcaagaaggaggagtacaactgtctaagcgatcttcgcaaagac
tttgagctgctgatacgcaactgccaaacctacaatgaagacggaagcatcctgtatcag
gatgcgaagacgatggaggaattcttcaaccaaaagtatcaagaggagctggacgcccac
ccggagcttcttgagctggaagagggcggcaaggcaggatcagcagcgccttcaggcaac
ggaaacactccgcagccgagcggcacgcgcatcaagatcatttccagtgcagcacgagaa
gccaacggggcacgttctgccgcccaaagtgatgaagattga
DBGET
integrated database retrieval system
