Terriglobus roseus: Terro_0964
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Entry
Terro_0964 CDS
T02140
Name
(GenBank) DNA topoisomerase I, bacterial
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
trs
Terriglobus roseus
Brite
KEGG Orthology (KO) [BR:
trs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
trs03032
]
Terro_0964
03400 DNA repair and recombination proteins [BR:
trs03400
]
Terro_0964
Enzymes [BR:
trs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Terro_0964
DNA replication proteins [BR:
trs03032
]
Prokaryotic type
DNA Topoisomerases
Terro_0964
DNA repair and recombination proteins [BR:
trs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Terro_0964
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
zf-C4_Topoisom
Toprim
HMBD
DUF5981
Dala_Dala_lig_C
Motif
Other DBs
NCBI-ProteinID:
AFL87285
UniProt:
I3ZDG7
LinkDB
All DBs
Position
1075938..1078790
Genome browser
AA seq
950 aa
AA seq
DB search
MGKNLVIVESPAKAKTINKYLGSDYTVEASIGHIMDLPKNDIGVELKNRTFLPKLIVSPG
KEKLVDRLKKLAAKADAVYLAPDPDREGEAIAAHLQMQLQPGMKSKAPIFRVTFNEITKK
AVNDAFKTPRQVDNNLMLAQQTRRVLDRLVGYEISPLLWDKVRRGLSAGRVQTVALRLIV
DRENEIKAFNPVEYWPVDAKLKPASSKQEFIARLYAIDGTGLRVETVGPPALPEGVSAEA
AKAGMEKAKWTVASVEAKERRRNPPAPFSTSRLQQDASNRLGFNVKRTMGVAQRLYEGVE
VGKEGTVGLITYMRTDSTRVAPVAIDMARDYIKTLGPQYLPAKPNDFKGKKDAQDAHEAI
RPTNVAYTPESIRKYLSDEQFKLYDLIWRRFVGSQMTPAVYDQTNVDITGVSDKKYSVRV
SGSVLKFDGFLKVADPRAANATAAAKPQNESSDGENEGADTALPALKQGQALDLVEVLTE
QKFTEPPPRFNEASLVKELEERGIGRPSTYASIINTIQDRDYVKKLARKFVPTEIGMVVT
TLLVKNFPYIFDMDYTRKLEDELDEVESGKEKWTNLLDGFYGHLLKEIKVAEGSMEEIKR
WEKPTEELCEKCGSPLILKWGKFGSFYSCSAFTKTKPKTIAVSAFKKDAKAAMKRVTDSF
EYPVTVKGMVDDAEASSEEVKDDKQLLAAMKLASTRGKSILIDPVSCDFTKENFADKPDL
AAMEAGDTEEEEFCENCGKLMVLKNGPWGPFMSCPDYSADPPCKTVRRLNQKVQQKPPEP
TGEPCPECGMELVKRTGSYGEFTSCSGYPKCKYVKQTLLDVACPKDGGKIAERKSKMGNV
FYGCTNYPKCDFTSNLKLINKPCPKGNSTYLLEVPNKADGLIHEVCPHNHEALPKRRPKK
GAKVEEVVHPIECGYEEITDRPIPVVAPIEVPVLKRPDPETTRPLVESVA
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgggtaagaatctcgtgatcgtagagtcgccggcgaaggcgaagacgatcaataaatat
ctcggcagcgactacacggtggaggcttcgattggccacatcatggacctgcccaagaac
gacatcggcgttgagctgaagaaccgcacgttcctgccgaagctgattgtttcgcccggc
aaggaaaagctggtggaccggctgaagaagctggccgcgaaggcggacgctgtgtacctg
gcgcccgatcctgaccgcgaaggcgaggcgattgccgcgcatctgcagatgcagttgcag
ccgggcatgaagagcaaggctccgatcttccgcgtgacctttaatgagatcacgaagaag
gccgtcaacgacgccttcaagacgccgcggcaggtggacaacaacctgatgctggcgcag
cagacgcgccgcgtgctggaccggctggtgggctatgagatctcgccgctgctatgggat
aaggtgcgccgcggactgagtgccggacgcgtgcagacggttgcgctgcggctgatcgtg
gaccgcgagaacgagatcaaggcattcaacccggtggagtactggccggtggatgcgaag
ctgaagcccgcttcgtcgaagcaggagtttattgcacgtctgtacgctatcgatggcacg
ggtcttcgcgttgagacggttggtccgccggcgctgccggagggcgtgagtgccgaggct
gcgaaggccggtatggagaaggcgaagtggaccgttgcttctgtggaagcgaaggagcgc
cgccggaatccgcctgcgccgttctcgacttcacggctgcagcaggatgcttcgaaccgc
ctcggtttcaacgtgaagcggacgatgggcgttgcgcagcgtttgtatgagggcgtcgag
gtcggtaaggaaggcaccgtcggcctgatcacgtatatgcgtaccgattccacacgtgtg
gctccggtcgccatcgacatggcgcgcgactatatcaagacgcttgggccacagtatctg
ccggcgaagccgaatgacttcaagggcaagaaggacgcgcaagatgcgcacgaagccatc
cgtccgaccaacgttgcatacacgccggagagcatccggaagtacctgagcgacgagcag
ttcaagctgtacgacctgatctggcgccgctttgtcggcagccagatgacgccggccgtc
tatgaccagacgaacgtcgatatcactggcgtgagcgacaagaaatacagtgttcgcgtt
tcgggatcggtgctgaagtttgacggtttccttaaggttgccgatcctcgcgctgccaat
gcgacggctgctgcgaagccgcagaatgagtcgtctgacggcgagaacgagggcgcggat
acagcgctgcccgcgctgaagcagggacaggccctggacctggtggaagtgctgacggag
cagaagttcacggagccgccgccacgcttcaacgaagcttctctggtgaaggaattggaa
gagcgcggcatcggccggccttcgacttacgcgagcatcatcaacacgattcaggatcgc
gactacgtcaagaagctggcgcggaagtttgtgccgacggagatcggcatggtcgtgacg
acgctgctggtgaagaactttccgtacatcttcgatatggactacacccgcaagctcgag
gatgagctggacgaggtggagagcggcaaggagaagtggacgaacctgctggacggtttc
tacggtcacctgctgaaggagatcaaggtcgccgaaggttcgatggaagagatcaagcgg
tgggagaagccgacggaggagctgtgcgagaagtgcggctcgccactgattttgaagtgg
ggcaagttcggctcgttctatagctgcagcgccttcaccaagaccaagccgaagaccatt
gcggtaagcgccttcaagaaggacgcgaaggccgcgatgaagcgcgtgacggactcgttt
gagtacccggtgacggtcaagggcatggtcgacgatgccgaggcctccagcgaggaggtc
aaagacgacaagcagttgctggcggccatgaagctggcttccacgcgtggcaagagcatc
ctgatcgacccggtgagttgcgactttacgaaggaaaacttcgcagataagccggatctt
gcggcaatggaggcgggcgacaccgaggaagaggagttctgcgagaactgcggcaagctg
atggttctgaagaacggaccgtggggcccgttcatgagctgcccggattactcggctgac
ccgccgtgcaagactgtgcgccggctgaaccagaaggtgcagcagaaaccgccagaaccc
accggcgagccctgcccggagtgcggcatggagctggtgaagcggaccggatcgtatggc
gagttcacgtcgtgctcgggatatccgaagtgcaagtacgtcaagcagacgctgctggac
gtggcttgcccgaaggacggcggaaagatcgcggaacgtaagtcgaagatgggaaatgtc
ttctacggctgcacgaactatccaaagtgcgatttcaccagcaatctgaagctgatcaac
aagccatgcccgaaggggaacagcacctacctgctggaggtgccgaacaaggcggatggt
ctgattcacgaggtgtgtccgcataaccacgaagcgctgccgaagcgtcggccgaagaag
ggcgccaaggtggaagaggtggtccatccgatcgagtgcggttacgaggagattacggac
cggccaattccggtggtggcgccgatcgaggttccggtgctgaagcggcccgatcctgag
actacccggccgctcgtagagagtgttgcgtaa
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