Takifugu rubripes (torafugu): 101062155
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Entry
101062155 CDS
T02386
Name
(RefSeq) LOW QUALITY PROTEIN: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2-like
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101062155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tru03021
]
101062155
03036 Chromosome and associated proteins [BR:
tru03036
]
101062155
Transcription machinery [BR:
tru03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
101062155
Chromosome and associated proteins [BR:
tru03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
101062155
PBAF complex
101062155
GBAF(ncBAF) complex
101062155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
101062155
NCBI-ProteinID:
XP_003961612
Ensembl:
ENSTRUG00000005247
LinkDB
All DBs
Position
1:13016293..13023400
Genome browser
AA seq
503 aa
AA seq
DB search
MASRGGFTGPPMNSNVHPMNVGHAAGMRMPGMPQPPMGFPRTMSNAPQYPQRSGMPPNRA
GGPMASMGGQMPGPSYGGGNMAMRPGMGPPGMDPSRKRFLHQHPQQQQQEALGGLRRGAK
RRKMADKVLPQRIRDLVPESQAYMDLLAFERKLDQTISRKRMEIQEAIKKPIMQKRKLRI
YISNTYTPSKPEGEDSEKVASWELRVEGKLLEEPGKQKKKFSSFFKSLVIELDKELYGPD
NHLVEWHRMPTTQETDGFQVKRPGDVNVKCTLLFMLDHQPPQYKLDPRLARLLGVHTQTR
ASIMQALWLYIKNNKLQDCHEKEYINCNRYFRQIFGCGRMRFAEIPMKLAGLLQHPDPII
INHTISVDPADQKKTACYDIDVEVDDPLKSQMNNFLSSTTNQQEIAALEMKIHETIEYIN
QLKTERDFMLSFSNNPQDFIQDWLKSQSRDLKLMTDVTGNPEEERRTEFYQAPWVPEAVS
RYVFSKVQQRRQELEQVLGIRLT
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggcatccagaggaggtttcacgggtccgccgatgaattcgaacgtgcaccccatgaat
gttggacatgccgcgggtatgaggatgccaggcatgccccagcctccgatgggttttccc
cgaactatgagcaacgctccccagtacccccagcgctcagggatgcctcccaaccgagca
ggtggccccatggcttcaatgggggggcagatgcctggtccctcgtacggaggagggaac
atggccatgcggccggggatggggcctccaggaatggatccctcgaggaaacgcttcctt
catcagcatccacaacaacagcagcaggaggccctcggaggcctgagacgaggagcgaag
aggcgcaagatggccgacaaggtgctcccacagaggatccgggacctggtccccgagtct
caggcctacatggatctgttggcctttgagaggaaactggatcagaccatctcacgaaaa
cgcatggagattcaggaagccatcaagaaacccataatgcaaaaacgtaaactcaggatc
tacatttccaacacgtacactcccagcaagcccgagggtgaggactcggagaaagtggcc
tcttgggagctaagggtcgagggcaaactcttggaggaacctggcaagcaaaagaagaag
ttttcatctttcttcaaaagcttagtgatcgagctcgataaagagctgtacggacctgat
aaccacttggtggagtggcacaggatgcccaccactcaggagacagatgggttccaggtg
aaaaggcccggtgacgtcaacgttaaatgcactcttctgttcatgctggatcaccagcct
cctcagtacaaactggacccccgcttggcccgtctgctgggtgtgcacacacagacgcgt
gccagcatcatgcaggctctctggctctacattaaaaacaataagctgcaggactgtcac
gagaaagagtacatcaactgcaaccgttactttagacagatctttggctgtggccgcatg
agatttgctgaaatccccatgaaactggcgggcctgctgcagcaccctgaccccataatc
atcaatcacaccatcagcgtggaccctgctgatcagaagaaaacggcgtgctatgacatt
gatgtggaggtggatgaccctctgaaaagccagatgaataatttcctgtcctccaccact
aaccagcaggagattgctgcactagagatgaagattcatgagacaattgagtacatcaac
cagctgaagactgagagagactttatgctgagtttcagcaataatcctcaggatttcatc
caagactggctcaagtctcaaagcagagatttaaagttgatgacagatgtaacaggaaac
ccagaagaagaaagaagaacggagttttatcaggcaccctgggtaccagaggctgtcagt
agatatgttttctccaaggtgcagcagagaagacaagagttggagcaggtccttggtatc
cgactcacttaa
DBGET
integrated database retrieval system
