Takifugu rubripes (torafugu): 101063015
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Entry
101063015 CDS
T02386
Symbol
hnrnpm
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein M isoform X1
KO
K12887
heterogeneous nuclear ribonucleoprotein M
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101063015 (hnrnpm)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tru03041
]
101063015 (hnrnpm)
Spliceosome [BR:
tru03041
]
Common components
Common spliceosomal components
hnRNP proteins
101063015 (hnrnpm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
MARF1_RRM1
RRM_occluded
RRM_7
Motif
Other DBs
NCBI-GeneID:
101063015
NCBI-ProteinID:
XP_003974256
LinkDB
All DBs
Position
20:complement(9713965..9720014)
Genome browser
AA seq
690 aa
AA seq
DB search
MSTEQTENTIEKVGQPTPQQQQQPPQQQQQQPPAAPPQQGEVNGKLKHEPNPNRKERPQK
RGGGARYEPYGNVHKRYRVFVSNIPYDVKWQALKDLMKEKVGEVTYVEHLMDAEGKSRGC
AIVEFRTEELMKKAVEKVNKHNFNGRPLKVKEDPDGVIAQREINKSQGVGPQGGHGGMGG
MGMDRMGPGPSGSMVNIPPSLLNNPNIPTEVIHGLQAGRIGNTVFVANLDYKVGWKKLKE
VFIMAGLVVRTDILEDKDGKSRGMGTVTFDSPLEAVQAVSMFNGQLLFNRVMHVKLDEKS
MPKDFGPPERAPALPRGLSGIGLGLGPGGQPIDASQLNRGGGGMGNMGPGGMDGMGFGNM
GGRMGGGGGGGGMDNFGGMNNNMDRFGSSGVGRMNEMDRGIGGAFDREFGRNEMGMSRNN
FGDSFERGMGNSMGMDRMNSGMDRLGGNMERMSGMDRMGMDRMDRVSDLDRLGSGFDRMG
SGMDRLGSNMDRLGPGMERMGSNMDRLGPSGFDRLGPSGMDRMGSNLDFGSQMSMDRMGS
TGIDRMSNSFDRIGSTGGLDRFPSGGLDRMGTGMDRMGSGGVGQFDRTSDLDRGFGGNTF
RGTGGPGNVRKGCQIFVRNLPFDFTWKNLKDTFNAYGMVQYADIKMENGKSKGCGVVRFD
SPETAERVCQTMNGYRLNGREIDVRIDRNA
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccgaacagaccgaaaatactatcgaaaaagtgggtcagccgacaccgcaacaa
caacagcaaccgccgcaacagcagcagcagcagccgccggcggcgccgcctcagcaggga
gaggtgaacgggaaactcaagcatgagccgaacccaaacaggaaagagaggcctcagaag
agaggtggaggcgcgcggtacgagccctatggaaacgtgcacaaaagataccgcgttttt
gtcagcaacattccctacgacgtgaaatggcaagccctgaaagacctcatgaaagaaaaa
gtgggtgaggtaacgtacgtggaacacttaatggacgctgaaggaaaatcaaggggttgt
gctattgttgaatttcgcacggaggagctgatgaagaaagcagtggagaaggtcaacaaa
cacaacttcaatgggcggccgctgaaagtcaaagaggaccccgatggtgtgattgcccag
agagagatcaacaagtctcaaggtgttggcccccaggggggtcatggtggaatgggcggt
atggggatggatcgaatgggtcctggaccttctgggagcatggtcaatatccccccgagc
cttttgaacaaccccaacatcccgaccgaagtcatccacgggctccaggctggcaggatt
ggaaacactgtctttgtggccaatctggactataaagtgggctggaagaagctgaaagag
gtgtttatcatggctggcctggtggtgaggactgacattctggaggacaaggatgggaaa
agccgaggaatgggcacggtcacgtttgactcccccctggaagcggttcaggctgtctct
atgttcaatgggcagctgttgttcaacagagtcatgcatgtcaaactggatgagaagtcc
atgcccaaagattttggacctcctgagagagcacctgcacttccacgtggtctcagtggt
attggcctgggcttggggcccggtggccagcccattgatgcttcccagctcaacagagga
ggtggaggaatgggcaacatgggcccaggaggaatggatggaatgggcttcggcaacatg
ggagggcgaatgggaggaggtggaggaggaggtggaatggataactttggtggaatgaat
aacaacatggatcgttttggttcttctggagtgggcaggatgaacgagatggatcgcggg
attggtggtgcttttgacagggagtttgggcggaatgaaatgggaatgtctcgcaataat
tttggggactcctttgaaagaggaatgggtaactccatgggaatggaccgcatgaactcc
ggaatggaccgcctgggtggcaacatggagcgcatgtcagggatggaccggatgggtatg
gataggatggaccgggtgtctgacctagacaggctgggttctgggtttgaccgaatgggt
tcaggcatggaccggctggggtccaacatggatcggctcggacctggcatggagcgcatg
ggctccaatatggaccgcctcggtccttctgggtttgaccgtttagggccatctggtatg
gatcgcatgggttctaacctggatttcgggtcccaaatgagtatggatcgaatgggaagc
accgggattgacaggatgtccaacagcttcgaccgcatcggctcgactggtggactggac
cgcttcccatccggtggcctcgaccgcatgggcactggcatggatcgcatggggtcaggg
ggcgtcggtcagtttgaccgcacgtctgacctggatcgtgggtttggtgggaacaccttc
agggggaccggaggccccggaaatgtacgaaagggatgccagatttttgtcagaaatctt
ccatttgattttacctggaaaaacctgaaggacaccttcaatgcatacggcatggttcag
tatgccgacatcaagatggagaacggcaagtccaagggctgtggcgtggttcgcttcgac
agtcccgaaactgccgagcgtgtctgccagaccatgaacggctacaggctgaatggaaga
gagatcgatgtcaggattgacaggaatgcataa
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