Takifugu rubripes (torafugu): 101064693
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Entry
101064693 CDS
T02386
Symbol
col6a6
Name
(RefSeq) collagen alpha-6(VI) chain isoform X1
KO
K06238
collagen type VI alpha
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru04510
Focal adhesion
tru04512
ECM-receptor interaction
tru04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101064693 (col6a6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101064693 (col6a6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
101064693 (col6a6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tru04147
]
101064693 (col6a6)
00536 Glycosaminoglycan binding proteins [BR:
tru00536
]
101064693 (col6a6)
Exosome [BR:
tru04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
101064693 (col6a6)
Glycosaminoglycan binding proteins [BR:
tru00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
101064693 (col6a6)
Hyaluronan
Extracellular matrix or blood plasma proteins
101064693 (col6a6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
Kunitz_BPTI
VWA_CoxE
DJ-1_PfpI
Motif
Other DBs
NCBI-GeneID:
101064693
NCBI-ProteinID:
XP_011603519
LinkDB
All DBs
Position
7:complement(4646666..4671638)
Genome browser
AA seq
2560 aa
AA seq
DB search
MEGGRSLLLILILAACFYGNGAQRTECATVGDIVFLVDGSSSIGTDNFQEVRLFLRNFTS
GLDIGPDKIQIGLAQYSNDPHQEFLLKDHMEKTALLAALDSFPYRTGGTETGKAIDFLRT
QYFTKEAGSRANQRVPQIAVVITDGDSTDDVTVPAQSLRKHGVIVFAIGVGNANQNELES
IANRPPKRFKFTIDSFQALQRLTKGLLQTMCVSIEDQHQALKEKFADIFFLVDSGLNPTD
FQQVKTTLSRLVNQMNFNAYTYRLGLAQYGQNIDVKFLFNTHQTKEELLKAIKAVNNRRL
QPNEVHNLGSALQYVYKNLFTAEAGSRTDQSFRQYLVVVSGKDSNDPFYKEARLLKSAGI
YIITFSAGASMKELSVLSSPRYSYQSISNALPNLKTILEKKQEVMEVTDDCKVANIADIV
FIIDESGSIGSANFQLMRSFLHSLISGLQVASNRVRVGIVMYNVEPMAQVFLNTFKDKSE
LLDFIKILPYHGGGTNTGAALNFTLQEVFIKQRGSRKDLGVQQVAVVITDGKSQDEVSSP
AANLRRAGVTVYAVGVKDADKAQLDQIASYPTNKHTFIIDSFTKLKTLEASLQRILCQNV
VQQAFSVNSRRASIREGCLQTDEADIFFLIDHSGSINPADFHDMKKFMIEFLHTFRVGPQ
HIRIGVVKFADSPQLEFDLQAYSDVKSLEDAILNIKQLGGGTETGRALEFMSPQFDQALA
THGHKVKEYLVVITDGKSTDKVKAPADKLRSQDVVVYAIGVKNADENQLLEISGDPQRTF
FVNNFDALRPIKDDIITDICSQDVCKDIPGDLIFLIDSSGSIYPEDYKKMKDFMKSVIKQ
SIVGKNEVHVGVMQYSTIQKLVFPLNQYYTKDELSKAIDEMQQIGGGTHTGEAITDVSQY
FDARNGGRPDLKQRLVVVTDGESQDEVRQPAEALRAKGVIVYSIGVVAANTSQLLEISGT
PNRMYAGRDFDALKDLEKQMAMELCDPDRECKKTEKADIIFLVDGSTSITQPKFRSMLKF
MASMVNQTTVGSDLTRFGVILYSNDANSMFTLKQYSAKREVLQAIAALKSPLGDTYTGKA
LTYSLQFFNEEHGGRAALQVPQILMVITDGDATDRNRLVPPSLALQNQGISVFSIGVEGA
NKTQLEIMAGGDRSKVFYVDNFDALENLYKNITHVLCNSTKPACEKQKADLVFLLDQSGS
IQPNDYITMKKFTVDLIKSFKVSKEFVHVGLAQFSSSFQHEFYLNQFFTEQVISKHVMDL
QQLGGGTNIGLALNSIREYFEASRGSRSPEGISQNLVLITDGESQDDVEDAARLLRSLGV
EVFTIGIGNAHDLELLQIAGSPERVFTVKSFGNLENIKQKVVDTICESKLIPDRPGCSID
IAMGFDISKRSGASGEMLITGHAALQTFLPEIAHYVSSIKGLCCAGPTPVKTNMGYRVVR
QDGSTLYDFNFEPYSRGVVDKVMTISLAEPTYFNTALLKSFQEKFSQSRAGVKVLVIFSD
GLDEDVMKLEQESELLRNSGVSALMVVALEGTNSLGQLQMVEFGRGFGYKVPLSINMQSI
GSTLLKQIDTVSDRECCGVMCKCSGHEGVRGSRGPPASKGVTGQNGYPGFPGEEGVAGDR
GRPGPSGPQGVQGCSGPRGLPGNRGLRGNRGENGEDGLNGVDGEQGDAGNDGSRGERGHA
GNPGIPGIRGEAGLKGQRGLRGDPGEPGAQNTVPGPRGEAGNPGLPGQPGVDGRPGESGV
IGVPGPDGRRGPVGEKGSIGNPGEAGLPGLPGASGPLGSRGARGPPGQPGIQGLPGPQGG
PGPAGRPGVAGRRGTSGPKGEPGDPGVQGVPGPQGPRGLQGEDGRDGYGSPGPVGIKGDP
GFPGYTGLLGESGLQGPKGNPGPKGNTGQTGKAGFPGDPGLSGEPGYSGHRGPRGPPGSK
SMTECQMITYIRDNCACSSNHPGCPVYPTELVIGLDMSQDVTSAAFEKQRAAVLSLIEDI
AIAESNCPTGARVAVVGYSSYIKHLIRFQDYHRKKQLIEFVKNIAMERTGNSRKLGTAMR
FVGQNIFKRVRAGAMTRKVAVFFSGGATQDVSDVVTAVMEYRGLNIVPAIVSLRNDPALS
QAMEVDDSLNSIFAVLGRDAVADLWKVKNCAMCYDPCKRTEQCSFIQEKVLPQEADLDLA
LVVDGSREIQADEFAGIQQLLGSVVEQLAVSPQPRKPGNQARVAVIQQSSAQDIKPEFGL
QAYQNQNLMKRHLVQNMRQLSGSSALGHTLEFALNKVLLKVTHPRQRRVLFTVVGSQTAQ
EDSAKLQYISQKARCEGVALFVVTVGNRCNRTEVEEIVSTPVQQHLIHVGSMEAGEQAYI
RRFFRVFVNALSKGMNAYPPPNLKKSCNQMLGQGGGQSSIPGQDLEEVELKDEGFREHMR
GQADTSQLDITEMLTRGDGHRFRAGGNHNAQCQLQVDTGVQCGDYVQLWFFDKDIDACSP
FWYGGCGGNANRFSTEHECLRTCGRRNPNVLLKPKRPSSLSKDDCFLGQDQGNCDKYRTM
WFFDTEQNKCARFWYSGCGGNNNRFNTRDECENLCLSKRQ
NT seq
7683 nt
NT seq
+upstream
nt +downstream
nt
atggagggagggcggagtcttctcctcatcctcatcttggcagcatgtttctatggcaat
ggtgctcaaagaacagaatgtgccaccgttggtgacattgttttcctggtcgacggctcc
tccagtatcggtaccgacaactttcaggaggtccggctctttctgcgcaacttcacctca
ggtctcgatatcggccctgacaaaatccaaatcggcttggctcagtacagcaacgatcct
caccaagagttcctgctgaaagaccacatggaaaagacagcgctactggctgccttggac
tcttttccctatcgaaccggtggcacagaaacgggaaaggccatcgacttcctacgcaca
cagtatttcaccaaggaggcgggcagtcgagccaaccagcgggtgccccagatcgctgtg
gttatcacagatggggattccacagatgatgtgacagtgccagcgcagagtctgaggaaa
cacggggtcattgtgttcgccatcggggtcgggaacgccaaccagaatgagcttgagtct
atcgccaaccggccgccgaagcgcttcaagttcaccattgatagtttccaggcgctgcag
aggctgacaaaggggctcctgcaaactatgtgtgtttcaatagaggaccagcaccaagcc
ttgaaagaaaagtttgcagatattttctttctggtggacagcgggttgaaccctacagac
ttccagcaggtaaagaccaccctcagcagactggtcaaccaaatgaactttaacgcttac
acctatcgtctgggtctggctcaatatggtcaaaacatcgatgttaaattccttttcaac
actcatcaaaccaaagaagaattactgaaggcaattaaagctgtgaacaaccgcaggctt
caacccaacgaggtccataatctgggcagcgcgttacagtacgtgtacaaaaaccttttc
acagcggaggcaggaagcaggacagaccaaagcttccgccagtacctggtcgttgtaagt
gggaaggattcaaatgatcctttttataaggaggcccgtctgctcaagtcagctggaata
tacataatcacctttagcgccggtgcgtccatgaaagaactaagtgtcctatctagtcca
aggtactcgtatcagtccataagcaacgccttaccgaacctgaagacgatcctagaaaaa
aaacaggaggtgatggaggttactgatgattgcaaagtggctaatattgcggacatcgtg
ttcatcattgatgaatccggaagcatcggaagcgccaactttcagctcatgcgtagcttc
ttgcattcacttatcagcggcctgcaagtggcttcaaacagggtccgagtggggattgtg
atgtataacgtggagccgatggcacaggtgttcctcaacacctttaaagacaaaagtgaa
ctgcttgatttcattaaaattttgccttaccatggaggtggcaccaacaccggagcggct
ctaaacttcaccctgcaggaggttttcatcaaacagagaggaagcaggaaggaccttggt
gtccagcaagtggcagtggtgatcactgatggtaaatctcaggatgaagttagcagcccg
gcagctaatctccgtcgggctggtgtcaccgtttatgccgtgggtgtcaaagatgctgac
aaggcccagctggaccagatcgcttcttatcccaccaacaagcacacgttcatcatagac
agtttcacgaagctgaagacactggaagcgagtctgcagcgaattctatgccagaacgtc
gtccaacaagcattctcagtcaatagcagaagagctagcatcagagagggctgcctacag
acggatgaagcagatatcttcttcttgattgatcactcaggaagtatcaaccctgctgac
ttccatgacatgaagaagttcatgatcgagttcctccatacttttcgcgttgggccgcag
cacatccgtataggggtggtaaaatttgcagattcgcctcaattagaatttgatttgcaa
gcctactcggatgtgaagtcactggaggatgccatcctcaatattaaacagctcggaggt
ggaacagagacgggaagagccctagaattcatgagccctcagtttgaccaagcgctggcc
acccatgggcacaaagttaaagagtatctggttgttattactgatggaaaatccaccgac
aaagtcaaggcccctgcagacaagctgagatcacaagatgttgtggtctacgcaatcggg
gtgaaaaacgcagatgaaaatcagttgctggagatttctggtgatcctcagaggactttc
tttgtcaataattttgatgctctgaggcccattaaggatgacatcatcacagacatctgc
tctcaagacgtctgcaaagatataccaggagatcttattttcctgattgacagctcaggg
agcatctatccggaggactacaagaaaatgaaagacttcatgaagtcggtcattaaacag
tccattgttggcaagaatgaggtccatgttggtgtcatgcaatacagcactatccaaaaa
ctggtattccccctcaaccagtactacaccaaggatgaactgtccaaagccattgatgaa
atgcagcagattggtgggggcactcacacaggtgaagccatcacagacgtttctcagtac
tttgacgcccgaaacggaggccgtccggacttgaagcagaggttggtggtggtaacagat
ggtgagtctcaggatgaggtgagacaacctgcagaggccctgagagccaagggggtaatt
gtctattccatcggtgtggtggccgccaacaccagccagctgttggagatcagtgggacc
cccaaccgaatgtatgccggccgggactttgatgctctgaaggacctggagaagcagatg
gccatggagctgtgtgatccagaccgagagtgtaagaagacggaaaaagccgacataatt
ttcctggtggatggctccaccagcatcacacaacccaagttccgcagcatgctgaaattt
atggcttcgatggtgaaccagacgacagtcggctctgacttgacgcgctttggggtcatt
ctgtactccaacgatgcaaattccatgtttactctcaaacaatattcagccaagcgagag
gttctccaagcaatcgcagcactaaagtctcctcttggagatacctacactggcaaggct
ttgacctacagtctacagttctttaatgaagaacacggcggtcgggctgcactccaggtg
ccacagattctcatggtgatcacagacggagatgcaacagatcgcaatagactggttcca
ccttcattagcactgcagaaccaaggtattagtgttttcagcattggagtggaaggagcc
aataagacacagctagagatcatggctggaggagacagatcaaaagttttctatgttgac
aactttgatgctctggaaaatctctacaagaacatcacccacgttctctgcaattctact
aaaccagcttgtgagaaacagaaggctgatctagtcttcctactggaccagtctggcagc
attcaaccaaatgactacatcaccatgaagaagttcaccgtagacctcattaagagtttc
aaagttagcaaagagtttgtccacgtaggacttgctcagttcagcagcagtttccaacat
gagttttacctcaaccaattctttactgaacaagtcatcagcaagcacgtcatggacttg
cagcagctcggcggtggtaccaacatcggactggcactaaactccatccgtgaatacttt
gaggcatcacgtggaagtcgcagtcctgaaggaatctcccagaacctggtgctgatcaca
gatggtgaatcgcaagatgacgtggaagatgcggctcggctcctcaggagtctgggggtg
gaggtgtttaccattggtattggaaacgcccatgacctagagctgctgcagatcgccggg
agtccagagagagtctttactgtaaagagctttggcaacttggaaaacatcaagcaaaaa
gtggttgacaccatctgcgaatcaaaacttatccccgatcgtccaggctgcagcatcgac
atcgccatgggatttgatatttcaaaaagatctggagcttctggcgagatgctcatcact
ggtcacgccgccctccagactttcctgccggagatcgcccactacgtgtcctccatcaaa
ggcttgtgctgtgccggtccaacgcccgtcaagaccaacatgggttaccgagtggttaga
caagacggaagtacgctgtacgatttcaactttgagccctacagcagaggtgtggtggac
aaagtcatgactatatctctggccgagccgacttacttcaacacagctctgctgaagtcc
ttccaggagaagtttagtcaatcccgagcaggcgtgaaggttcttgtgatcttctctgat
ggcctcgatgaagatgtgatgaagctggagcaggaatcagagctgctgcgaaactcaggg
gtcagcgcgctgatggtggtggccttggagggcaccaacagtctgggccagctgcagatg
gtggagtttgggcgtggcttcggctacaaggttcctctcagcatcaatatgcagagcatc
ggcagcaccctcctcaagcagattgacacggtgtcggaccgggagtgctgcggtgtcatg
tgtaaatgttcaggacacgaaggtgtccgtggttctcgagggccgccagcgtcaaaggga
gtgactggacagaacggttacccaggattcccgggggaggagggtgtcgccggtgaccgt
gggcggcccggaccaagtggtcctcaaggtgtgcagggttgttctggtccaagaggactg
ccgggtaaccgcggtctccgtggaaacaggggtgaaaacggagaagatgggctcaacggt
gttgacggtgaacagggagacgcaggaaatgatggaagtcgtggagagagaggacacgct
ggaaacccgggtatcccaggtatcagaggtgaggcggggcttaaaggacagcgaggactg
agaggagatccgggagaacctggtgctcagaatacagttccaggacccagaggagaggct
ggtaatccagggttgccgggacaaccaggagtggacggccggccgggcgagagtggcgtc
atcggagtaccgggtccagatggaagaagagggccagtgggtgaaaagggttcgattggg
aatccaggagaagcaggactcccaggcctccctggagcttcaggtccattggggtccaga
ggggccagaggtccaccaggacaaccaggcatccaagggcttcctggacctcagggtgga
ccaggaccagctgggaggccaggagtagccggacgacgtggcaccagtggacccaagggt
gaacctggtgatcccggtgtgcagggtgttccaggacctcagggaccacgaggactgcag
ggtgaggatggaagagatggttacggatcacctggacctgtgggcattaagggtgatcct
ggtttccctggttacacgggactactgggtgagagcggcctacaggggcctaaaggaaat
ccaggacctaaagggaacacaggccaaactggaaaagctggttttccaggggacccagga
ctttctggagagccaggttattcaggacacaggggtcccagaggtcctcctggaagcaaa
tctatgactgagtgtcagatgatcacctacatcagagacaactgtgcctgttccagcaat
caccctgggtgcccggtgtaccccacagagctggtgattggtctggacatgtcccaggat
gtgacctcagcagcctttgagaagcaacgtgctgctgtcctctccctgatagaggacatc
gccatcgccgagagcaactgtccgactggcgcccgcgttgctgttgtgggctacagcagc
tacataaaacacctgatccgcttccaagattaccaccgaaagaagcagctgattgagttt
gtgaagaacatcgccatggagaggacaggcaacagccgcaagctgggcaccgccatgcgc
tttgtgggtcagaacatcttcaagcgggtcagagctggagccatgacaagaaaggtggct
gttttcttcagcggcggggccacgcaggacgtcagcgacgtcgtcaccgctgtgatggag
taccgcggcctcaacatcgtccccgccatcgtctccctgagaaacgaccctgccctgagc
caagcgatggaggtggatgactcattaaactccatctttgctgtgttgggtagagacgcg
gtcgccgacctgtggaaggtgaagaactgtgcaatgtgctacgatccctgtaagcgtacg
gagcagtgttcgttcatccaggagaaggttctgcctcaggaggccgacctggacctggcc
ttggtggtggacggctccagggagattcaagccgatgagtttgccggcattcagcagctt
ctgggctctgtggtggagcagctagctgtgagccctcagccacgcaaacccggaaaccag
gcccgtgtggccgtcatccagcagagcagcgcccaggatattaagcccgagtttggactg
caggcctatcagaaccaaaacctgatgaagagacaccttgttcagaacatgcggcaacta
agcggctcctcggcacttggtcacactctggaatttgccctgaacaaggttctcctaaag
gtcactcaccctcgccagaggagggtgttgttcactgtggtgggctcccagacggcccaa
gaggactcagccaagctgcagtacatctcccagaaggccaggtgtgagggtgtggccctg
tttgtggtcacagttggtaatcgctgcaatcggacggaggtggaggagatagtcagcaca
cccgtccaacagcacctgattcatgtgggcagcatggaggctggtgaacaagcctacatc
cgccgtttcttcagggtattcgtcaatgccctcagcaagggaatgaacgcttatccaccc
ccgaacttgaaaaaatcatgtaaccagatgttgggccaaggtggtgggcagtcctccata
cctggtcaggacttggaggaggtggagctaaaggacgagggcttccgggagcatatgaga
ggtcaggcagacaccagccagctggacatcactgagatgctgacccgaggagatggacac
agatttagagccgggggcaaccataatgcccagtgtcagctgcaggttgatactggtgtc
cagtgtggggattatgtccaactatggttctttgacaaagacatcgatgcatgctctccc
ttctggtatggtggctgtggcggcaacgccaaccgctttagcacggagcatgaatgtttg
aggacgtgtggccgccgcaatccaaacgtcctgctgaagccaaagagaccgagctccctg
tccaaagatgactgcttcctgggccaggaccaggggaactgtgacaaatacagaacgatg
tggttcttcgacacggagcagaacaagtgcgctcgcttttggtacagcggttgtggaggc
aataacaaccgcttcaatacgcgggacgagtgcgagaacctctgtctgagcaaacgccaa
tga
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integrated database retrieval system
