Takifugu rubripes (torafugu): 101068839
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Entry
101068839 CDS
T02386
Symbol
exosc5
Name
(RefSeq) exosome complex component RRP46
KO
K12590
exosome complex component RRP46
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101068839 (exosc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tru03019
]
101068839 (exosc5)
Messenger RNA biogenesis [BR:
tru03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
101068839 (exosc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
101068839
NCBI-ProteinID:
XP_003968627
Ensembl:
ENSTRUG00000009689
UniProt:
H2TI45
LinkDB
All DBs
Position
11:complement(12713616..12715894)
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AA seq
219 aa
AA seq
DB search
MEVCGISNVTLRDFSCEQSLLSRPDGSSSFMQGDTSVLAGVYGPAEVKVSKEIYDRATLE
VLIQPKVGLPSVKERSQEQNVRETCEASLLLSLHPRSSLTLVLQVLHDDGSLLSCFLNAA
CMALMDAGLPMSCLFCGVTCAIAVDGEIITDPTAAQEKECRALLTFAIDSKKCRVMMSST
KGSFSVQELQQCIAISQKASEKIFQFYRDSVQRRYSKNL
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atggaagtgtgcggcatttcaaatgttactctcagggattttagttgtgaacagagtttg
ttgtctcgtcctgacggttcatcgtcatttatgcaaggggacacaagtgtgttggctggg
gtgtatggaccagctgaagtgaaagtcagcaaagaaatctatgaccgtgcaacactggag
gtgttgatacagcctaaagtgggactaccaagcgtgaaggagcgatcacaagagcagaat
gtgcgagagacctgtgaggcatctctgctcctgtcacttcaccctcgctcctcgctcact
cttgttcttcaggtgttacatgatgatggttcattattatcctgttttttgaatgctgcc
tgtatggccctaatggacgcaggtctgcccatgagctgcctgttctgcggagtaacgtgc
gctattgcagtcgatggtgaaatcatcactgaccccactgcagcccaggagaaggaatgt
cgagctttgctgacttttgctattgacagtaagaaatgcagagtaatgatgtcatcaacc
aaaggatccttttcagttcaagaactgcagcagtgtatagcaatcagtcagaaagcatct
gagaagatcttccagttctacagagactctgtccagcgacgatattccaaaaacctctga
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