Takifugu rubripes (torafugu): 101070545
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Entry
101070545 CDS
T02386
Symbol
rbck1
Name
(RefSeq) ranBP-type and C3HC4-type zinc finger-containing protein 1
KO
K10630
RanBP-type and C3HC4-type zinc finger-containing protein 1 [EC:
2.3.2.31
]
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru04217
Necroptosis
tru04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
101070545 (rbck1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
101070545 (rbck1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tru04121
]
101070545 (rbck1)
Enzymes [BR:
tru01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
101070545 (rbck1)
Ubiquitin system [BR:
tru04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
101070545 (rbck1)
Multi subunit Ring-finger type E3
LUBAC complex
101070545 (rbck1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
zf-RING_5
zf-RING_2
zf-RanBP
zf-RING_11
Ubiquitin_2
Motif
Other DBs
NCBI-GeneID:
101070545
NCBI-ProteinID:
XP_011612336
Ensembl:
ENSTRUG00000011750
LinkDB
All DBs
Position
19:complement(11446893..11451217)
Genome browser
AA seq
517 aa
AA seq
DB search
MTSQGEPTSALKEAEELALSLSEALSGGDEQEAAELSRRLSQLSLPVTVSIKSQAYPQES
IRLHIGVEDGQSETYVLVTAVVSPHMTIAQLKEKISQDYGFPPALQRWVIGKRLTQDQET
LFSHGVRVDGDKAFLFILSANAACLTRQQHRLDQDQQRIEGIVESIQSMQLLSRGPTVDG
DKTEPTLETPPPPPPPPKPAVAPKPKLGWTCTVCTYFNKPTWPGCELCSSERPLDYKVPP
IYLPDQQELYRIQQEELAMLQYIQAQQEEREKNYTEFLATEEQNLIPTSTEIECPICFST
IQPGEGAVLRECLHAFCRDCLTGTIVNSRDAEVACPEACESKLQDREIKALLSEEEHARF
LELRLSIAESRSDRSFHCQTPNCRGWCVYEDEVNQFPCGLCGETNCILCRAIHDGMNCKD
YQDDLRIRAENDAAALQTKQLLTRLLQQGEAMKCPRCDIIVQKKDGCDWICCVMCKTEIC
WVTKQARWGPNGRGDTSGGCRCLVNHQPCHPNCQNCH
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgacctctcaaggtgaaccgacatcggctttgaaagaagctgaagagttggccctgtcc
ctgagtgaagccctcagcggcggggacgagcaggaagcggcggaactgagccgcaggctg
tcacagctctcccttcccgtgacagtcagcatcaagagccaggcgtatccccaagaatcc
ataagattgcacatcggagtggaggatggtcagtcagagacttatgtcctggtgactgct
gtggtctcccctcacatgacaattgcacaactcaaagaaaagatcagccaggattatggc
ttcccccctgctctgcagcgatgggtgatcgggaagcggttgactcaggaccaggagacg
ttattcagccacggcgtccgtgtagatggagacaaagctttcctctttatcctctccgcc
aacgctgcctgtctgacacgacaacaacacaggctggatcaggatcagcagcgtatagaa
gggattgtagaatcgattcagtcaatgcaacttttaagcagaggtccaactgtagatggg
gacaagacagagcctaccttagagactcctcctcctcctccccctcctccaaaacctgca
gtggctcctaaaccaaagttgggctggacttgcactgtgtgtacttattttaacaaacct
acatggcccggctgtgagttatgctcatcggagcgaccactggattacaaggtgcccccc
atctacttgcctgaccagcaggaactttatcgcattcagcaggaagagctggcgatgctg
cagtatatacaggctcagcaggaggagcgcgagaagaactacacagagttcttggcaaca
gaagaacagaaccttatcccgaccagcacagaaattgaatgtcccatctgcttctccacc
atccagccaggagagggcgctgtactcagagagtgtttgcacgccttctgcagagattgt
ctaacggggacaatagtaaacagtcgagatgctgaggtggcatgtccagaggcatgtgag
agcaagctacaggaccgagagatcaaagcactgctgagtgaagaggagcacgcgcgcttc
ctcgagttacgcctgagcatcgccgagagccgctcggatcgcagctttcactgccagaca
ccgaactgccggggctggtgcgtctacgaggacgaggtgaatcagttcccatgtggactc
tgcggtgaaactaactgcattctgtgcagggctatccatgatgggatgaactgtaaggac
taccaggacgacctgcgcatccgtgcagaaaacgacgccgcggcgttgcaaacgaaacag
ctgctgacgaggctgctgcagcagggcgaagccatgaaatgcccacggtgtgacatcatc
gtccagaagaaagatggctgtgactggatttgctgtgtcatgtgcaagacagaaatctgc
tgggtcactaaacaagctcgatggggaccaaatggtcgtggcgacacatctgggggctgt
agatgcctcgttaaccatcagccctgccacccaaactgtcagaattgtcactaa
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