KEGG   Takifugu rubripes (torafugu): 101071353Help
Entry
101071353         CDS       T02386                                 

Gene name
lig4
Definition
(RefSeq) DNA ligase 4
  KO
K10777  
DNA ligase 4 [EC:6.5.1.1]
Organism
tru  Takifugu rubripes (torafugu)
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:tru00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    101071353 (lig4)
Enzymes [BR:tru01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     101071353 (lig4)
DNA repair and recombination proteins [BR:tru03400]
 Eukaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     101071353 (lig4)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GeneID: 
NCBI-ProteinID: 
LinkDB All DBs
Position
8
AA seq 908 aa AA seqDB search
MEGTSRSDAAAEPSVAAQVPFVHLCTTLEKIQKAKLRPDKSKILGDFIGSWRKFHSALHK
ESKTTDSFYPAMRLFVPQFERERMAYGIKESMLAKLYIDVLGLPKNGPEASKLLNYRAPN
ISQGDAGDFASVAYFVLKKRCTSQGNLSVQEVNDFLDSVAINNASKKKDLVKKSLLHLIT
QSSALEQKWLVRMILKDMKLGVSKETVLQVFHPDAPDLYNVNTDLNKVCQQLHDPSVSLS
EVSIELFSAFKPMLAAVANIHTVEKQMGNSPFYIQTKLDGERIQLHKDGDVYKYFSRNAF
EYTQQFGGSPLQGSLTPYIHNVFNSHVVNCILDGEMMAYNPTTETLTQKGSKFDIKRLMD
DSELQTCFCVFDVLLVNDQKLGKEPLKKRYETLQTVFTPVKGRIHLVSKTDARRMQEVVN
ALNEAIDNREEGIMVKDPSSIYKPDKRGEGWLKIKPEYVDGLMDELDLLIVGGYWGKGRR
GGMMSHFLCAVAEAPKPGEKPSVFHTLCRIGSGYTMKELYELGLKLAKHWKVFRKSDPPA
SILCAAEKPEVYIEPCNSVIIQVKAAEIVGSDMYKTDCTLRFPRIEKIREDKEWHECMTL
AELDQFRSKASGKLASRHLHIDDDPQKKKRRVPVKPKKVVGTLEHFKAQDLSGVKKETDM
FEDVEFCILNGTEDHPKSELEKGVARCGGIVVQNPGRDTYCVIAGVENMRVKNLILSDQH
DVVWAAWLLECIDQKDVVPWQPRHMIHMSPSTREHFAKEYDAYGDSYFVDTDEQQLREVF
GRIRSSNVPAAVDVCQVEQRCGWEDLPTSLFRPFKVYVDACSDIGDAESAISASCLDIRA
LEFRFHGGTVVRRLEEGVSHVVVEEETRLLGLRTARRSFRKKFKIVKDSWVTDSIKAGYL
MDDTDYLV
NT seq 2727 nt NT seq  +upstreamnt  +downstreamnt
atggagggaacgtccagaagtgatgctgctgctgagccgtctgttgctgctcaggttcca
tttgttcacctgtgcaccactttagagaaaatccagaaagccaagctccggccagacaag
tccaagattttaggagatttcattggatcatggaggaagtttcattctgccctccacaaa
gaatccaaaacaacagactctttctacccagctatgcgcctctttgtcccccaatttgag
cgagagcggatggcatatggtattaaagagagtatgttagcgaaactctacattgatgtg
ttaggcctcccaaagaatggccctgaagccagtaagctgttgaactaccgcgcaccgaat
atatctcaaggagacgctggagactttgccagtgtggcatactttgtcctaaagaaacgg
tgcaccagtcaggggaacctgagtgtccaagaagtgaatgacttcttggactctgtggca
attaacaatgcaagcaagaagaaggatcttgtaaaaaagagtctgttgcacctcatcacc
cagagttcagctctagagcaaaaatggctcgtaagaatgattctgaaggacatgaagctc
ggggttagcaaggaaactgtcctccaagtcttccacccagatgcccctgacctctacaat
gtcaacaccgatttgaacaaagtgtgtcagcagctccatgacccctccgtatcccttagc
gaggtctctattgaactcttctcagcctttaagcccatgttggctgctgtggcaaatatc
cacactgtggaaaagcagatgggaaacagccctttttacattcagaccaagctggacggg
gagcgcatccagttgcacaaagatggggacgtgtacaaatacttcagccgcaacgcgttt
gagtacacgcaacagttcggaggatctcctctgcagggctcactcacaccttatatccat
aatgtctttaacagccacgtggtcaactgtatactggatggagaaatgatggcgtacaac
ccaaccacagagactttgacgcagaaagggagcaaatttgacatcaagaggctcatggat
gactctgagttgcagacatgcttctgcgtctttgacgtgttgctcgtcaatgaccagaag
ctcggcaaggagcctttaaagaagcgttacgagacacttcagacagttttcacaccagtc
aaaggtagaatccacctggtgtcaaagacagatgccaggagaatgcaggaggtggtgaac
gccctgaatgaggccattgacaaccgagaggaaggcatcatggtgaaggatccttcatcc
atttacaaacctgacaaacgtggggagggctggctgaaaataaagccagagtacgtggat
ggcctgatggacgagcttgacctgctgattgttggtggctactgggggaaagggagacgt
ggagggatgatgtctcacttcttgtgtgctgttgccgaggctccaaaacctggcgagaag
ccctctgttttccacaccctctgccgcatcggctctggctacaccatgaaagagttgtat
gaactcggtttaaaactggccaaacactggaaagtcttccggaaaagcgacccgccggca
tccattttgtgcgcagcggaaaagccagaagtctacatcgagccgtgcaactccgtcatt
attcaggtgaaggcagctgaaatcgttggcagcgacatgtataaaaccgactgcaccttg
cgcttccccaggatcgagaagatccgggaggacaaggaatggcatgagtgcatgactctg
gccgagctggaccagttccgcagcaaggcatcggggaaactggcctcgcggcacctacat
atcgacgacgatccccaaaagaaaaagcgcagggtgccggtcaagccaaagaaggtggtt
gggacactggaacactttaaggcccaagatctctccggagttaagaaggagaccgacatg
tttgaggatgtggagttctgcatcctgaacggcaccgaggatcaccccaagtctgagctg
gaaaagggtgtagccaggtgtggaggtattgtggtccaaaacccaggacgggacacctac
tgcgtgattgctggggttgagaatatgcgtgtgaagaacctgattctgtccgaccagcat
gacgtggtgtgggctgcctggctgttggagtgcatagatcagaaggacgtggtcccgtgg
cagccacgtcacatgatccacatgtccccctccacccgggagcactttgccaaggagtac
gacgcctacggcgacagctacttcgtggacactgacgagcagcagctgcgagaagtgttc
ggccggataaggagctcgaacgtgcccgccgctgttgacgtgtgccaggtagagcagcgc
tgcggctgggaagacctgcccaccagcctgttcagaccgttcaaggtttacgtggacgcg
tgctctgacatcggagatgccgagtcagccatctctgcgtcctgcctggacatcagggcg
ctggagtttcgcttccacggagggacagtggtgcggaggttagaggagggggtctcgcac
gttgtcgttgaagaggagacgagacttctgggtctgagaaccgccaggcgcagcttccga
aagaaatttaagatcgtaaaagactcatgggtgacggattccattaaagcaggttatctt
atggacgacaccgactacttagtttga

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