KEGG   Takifugu rubripes (torafugu): 101071353
Entry
101071353         CDS       T02386                                 
Symbol
lig4
Name
(RefSeq) DNA ligase 4
  KO
K10777  DNA ligase 4 [EC:6.5.1.1]
Organism
tru  Takifugu rubripes (torafugu)
Pathway
tru03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:tru00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    101071353 (lig4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tru03400]
    101071353 (lig4)
Enzymes [BR:tru01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     101071353 (lig4)
DNA repair and recombination proteins [BR:tru03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     101071353 (lig4)
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_IV DNA_ligase_A_C BRCT BRCT_2 RNA_ligase mRNA_cap_enzyme
Other DBs
NCBI-GeneID: 101071353
NCBI-ProteinID: XP_003966508
Ensembl: ENSTRUG00000009984
LinkDB
Position
8:complement(5279572..5284133)
AA seq 908 aa
MEGTSRSDAAAEPSVAAQVPFVHLCTTLEKIQKAKLRPDKSKILGDFIGSWRKFHSALHK
ESKTTDSFYPAMRLFVPQFERERMAYGIKESMLAKLYIDVLGLPKNGPEASKLLNYRAPN
ISQGDAGDFASVAYFVLKKRCTSQGNLSVQEVNDFLDSVAINNASKKKDLVKKSLLHLIT
QSSALEQKWLVRMILKDMKLGVSKETVLQVFHPDAPDLYNVNTDLNKVCQQLHDPSVSLS
EVSIELFSAFKPMLAAVANIHTVEKQMGNSPFYIQTKLDGERIQLHKDGDVYKYFSRNAF
EYTQQFGGSPLQGSLTPYIHNVFNSHVVNCILDGEMMAYNPTTETLTQKGSKFDIKRLMD
DSELQTCFCVFDVLLVNDQKLGKEPLKKRYETLQTVFTPVKGRIHLVSKTDARRMQEVVN
ALNEAIDNREEGIMVKDPSSIYKPDKRGEGWLKIKPEYVDGLMDELDLLIVGGYWGKGRR
GGMMSHFLCAVAEAPKPGEKPSVFHTLCRIGSGYTMKELYELGLKLAKHWKVFRKSDPPA
SILCAAEKPEVYIEPCNSVIIQVKAAEIVGSDMYKTDCTLRFPRIEKIREDKEWHECMTL
AELDQFRSKASGKLASRHLHIDDDPQKKKRRVPVKPKKVVGTLEHFKAQDLSGVKKETDM
FEDVEFCILNGTEDHPKSELEKGVARCGGIVVQNPGRDTYCVIAGVENMRVKNLILSDQH
DVVWAAWLLECIDQKDVVPWQPRHMIHMSPSTREHFAKEYDAYGDSYFVDTDEQQLREVF
GRIRSSNVPAAVDVCQVEQRCGWEDLPTSLFRPFKVYVDACSDIGDAESGISASCLDIRA
LEFRFHGGTVVRRLEEGVSHVVVEEETRLLGLRTARRSFRKKFKIVKDSWVTDSIKAGYL
MDDTDYLV
NT seq 2727 nt   +upstreamnt  +downstreamnt
atggagggaacgtccagaagtgatgctgctgctgagccgtctgttgctgctcaggttcca
tttgttcacctgtgcaccactttagagaaaatccagaaagccaagctccggccagacaag
tccaagattttaggagatttcattggatcatggaggaagtttcattctgccctccacaaa
gaatccaaaacaacagactctttctacccagctatgcgcctctttgtcccccaatttgag
cgagagcggatggcatatggtattaaagagagtatgttagcgaaactctacattgatgtg
ttaggcctcccaaagaatggccctgaagccagtaagctgttgaactaccgcgcaccgaat
atatctcaaggagacgctggagactttgccagtgtggcatactttgtcctaaagaaacgg
tgcaccagtcaggggaacctgagtgtccaagaagtgaatgacttcttggactctgtggca
attaacaatgcaagcaagaagaaggatcttgtaaaaaagagtctgttgcacctcatcacc
cagagttcagctctagagcaaaaatggctcgtaagaatgattctgaaggacatgaagctc
ggggttagcaaggaaactgtcctccaagtcttccacccagatgcccctgacctctacaat
gtcaacaccgatttgaacaaagtgtgtcagcagctccatgacccctccgtatcccttagc
gaggtctctattgaactcttctcagcctttaagcccatgttggctgctgtggcaaatatc
cacactgtggaaaagcagatgggaaacagccctttttacattcagaccaagctggacggg
gagcgcatccagttgcacaaagatggggacgtgtacaaatacttcagccggaacgcgttt
gagtacacgcaacagttcggaggatctcctctgcagggctcactcacaccttatatccat
aatgtctttaacagccacgtggtcaactgtatactggatggagaaatgatggcgtacaac
ccaaccacagagactttaacgcagaaagggagcaaatttgacatcaagaggctcatggat
gactctgagttgcagacatgcttctgcgtctttgacgtgttgctcgtcaatgaccagaag
ctcggcaaggagcctttaaagaagcgttacgagacacttcagacagttttcacaccagtc
aaaggtagaatccacctggtgtcaaagacagatgccaggagaatgcaggaggtggtgaac
gccctgaatgaggccattgacaaccgagaggaaggcatcatggtgaaggatccttcatcc
atttacaaacctgacaaacgtggggagggctggctgaaaataaagccagagtacgtggat
ggcctgatggacgagcttgacctgctgattgttggtggctactgggggaaagggagacgt
ggagggatgatgtctcacttcttgtgtgctgttgccgaggctccaaaacctggcgagaag
ccctctgttttccacaccctctgccgcatcggctctggctacaccatgaaagagttgtat
gaactcggtttaaaactggccaaacactggaaagtcttccggaaaagcgacccgccggca
tccattttgtgcgcagcggaaaagccagaagtctacatcgagccgtgcaactccgtcatt
attcaggtgaaggcagctgaaatcgttggcagcgacatgtataaaaccgactgcaccttg
cgcttccccaggatcgagaagatccgggaggacaaggaatggcatgagtgcatgactctg
gccgagctggaccagttccgcagcaaggcatcggggaaactggcctcgcggcacctacat
atcgacgacgatccccaaaagaaaaagcgcagggtgccggtcaagccaaagaaggtggtt
gggacactggaacactttaaggcccaagatctctccggagttaagaaggagaccgacatg
tttgaggatgtggagttctgcatcctgaacggcaccgaggatcaccccaagtctgagctg
gaaaagggtgtagccaggtgtggaggtattgtggtccaaaacccaggacgggacacctac
tgcgtgattgctggggttgagaatatgcgtgtgaagaacctgattctgtccgaccagcat
gacgtggtgtgggctgcctggctgttggagtgcatagatcagaaggacgtggtcccgtgg
cagccacgtcacatgatccacatgtccccctccacccgggagcactttgccaaggagtac
gacgcctacggcgacagctacttcgtggacactgacgagcagcagctgcgagaagtgttc
ggccggataaggagctcgaacgtgcccgccgctgttgacgtgtgccaggtagagcagcgc
tgcggctgggaagacctgcccaccagcctgttcagaccgttcaaggtttacgtggacgcg
tgctctgacatcggggatgccgagtcaggcatctctgcgtcctgcctggacatcagagcg
ctggagtttcgcttccacggagggacagtggtgcggaggttagaggagggggtctcgcac
gttgtcgttgaagaggagacgagacttctgggtctgagaaccgccaggcgcagcttccga
aagaaatttaagatcgtgaaagactcatgggtgacggattccattaaagcaggttatctt
atggacgacaccgactacttagtttga

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