Takifugu rubripes (torafugu): 101074957
Help
Entry
101074957 CDS
T02386
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent T-type calcium channel subunit alpha-1I-like
KO
K04856
voltage-dependent calcium channel T type alpha-1I
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru04010
MAPK signaling pathway
tru04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
101074957
04020 Calcium signaling pathway
101074957
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tru04040
]
101074957
Ion channels [BR:
tru04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
101074957
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
ETRAMP
TMEM208_SND2
Motif
Other DBs
NCBI-GeneID:
101074957
NCBI-ProteinID:
XP_029706496
LinkDB
All DBs
Position
17:complement(10041001..10133301)
Genome browser
AA seq
1958 aa
AA seq
DB search
MTSEEEEGAGIAASTPSRAAAATFEGATATAGGDGEDAAASSSPRRTSTHHLLCPEQKEE
KSKGIEEEEEGRIVHEERIEKEEDEEIVEAEEGDDDDDDDDDDDDGSSNTSMLVVPYPEL
VPVVFFCLKQTTCPRSLCIRMVSNPWFERVSIMVILLNCVTLGMYQPCENIDCSSDRCQI
LQAFDAFIYIFFALEMVVKMVALGIFGRRCYLGDTWNRLDFFIVMAGMVEYSLDLQNINL
TAIRTVRVLRPLKAINRVPSMRILVNLLLDTLPMLGNVLLLCFFVFFIFGIIGVQLWAGL
LRNRCYPEENFTLTTGISLPRPYYMADEDDERPFICSLREDNGIMSCSDIPTRREGGRVC
CLDKEDVLYRQSLGLSPEPMTNGSASVGGLCVNWNQYYTRCHTGHSNPHKEAINFDNIAY
AWIVIFQVITLEGWVEIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLVVIATQFSETK
QREHQLMQEQRAQCLSSSTLASEPGDCYEELFQLVCHILRKARRQTVILFNTLRGKPRGF
RGVGRGRGGKRRERKANGREGRQRAAMRRHAAPCPHHNKPDHTSPMALTSASVRDGCPQC
ATALSLSDGVGPVCTEKDEADDGAVEETDGEGVSSSNKEKRREGAANHKGCCPRRTCKDI
WYGTRVKLWEIVESKYFNRGIMIAILINTISMGIEHHEQPEELTNVLEICNIVFTSMFSL
EMILKLTAFGSFNYLRNPYNVFDGVIVIISVCEIVGQSDGGLSVLRTFRLLRVLKLVRFM
PALRRQLVVLMKTMDNVATFCMLLMLFIFIFSILGMHIFGCKFSIKTETGDTVPDRKNFD
SLLWAIVTVFQILTQEDWNVVLYNGMAATSPLAALYFVALMTFGNYVLFNLLVAILVEGF
QAEGDANRSNSDDDRSSSNFDESEKHDSIKLSDPRICTLTPNGHLELGGCSSSRGSYSSE
RRSVTVDSRKSSVMSLGKSSLERRSLSLRHGRSSNYHNWGRPLPPHSGWSRRSSSNSLGR
RSYGFGGAPLVGGSLRVRSSCSPQSYPYSAEQESLLTHPSHSHHPLSKHHPPPPLLLSRH
FARRRDRRALSLELPELLRAGGQPPGHPPFHPDTGRKSGCGAGGSVTGGSGIGSGLGGGH
RDCNGKTPGIHTRLMSEVFPQVNARKDRADLDEETDYSLCFRIQKMIEVYKPDWCETRED
WSVYLFSPQNGFRLLCQSIIAHKLFDYVVLVFIFLNCITVALERPKILQGSVERVFLTIS
NYIFTTIFVAEMTVKVVSMGLYLGXETYLRSSWNILDGFLVFVSLIDIVVSMAGGAKILG
VLRVLRLLRTLRPLRVISRAPGLKLVGETLITSLKPIGNIVLICCAFFIIFVCLPSQLFK
GKFYYCVGFDVKNITNKSDCLAANYRWVHHKYNFDNLGQALMSLFVLASKDGWVNIMYHG
LDAVGIDQQPITNXHPWMLLYFISFLLIVSFFVLNMFVGVVVENFHKCRQHQEVEEAKRR
EEKRQRRMEKKRRKAQKLPYYASYGPARLAIHTLCTSHYLDLVITFIICINVITMSLEHY
SQPRVSGWGVRTLLETALKYCNYVFTSTFVIEASLKLVAFGFRRFFKDRWNQLDLAIVLL
SVMGITLEEIESNASLPINPTIIRIMRVLRIARVLKLLKMATGMRALLDTVVQALPQVGN
LGLLFMLLFFIYAALGVELFGELVCNADYPCEGMSRHATFENFGMAFLTLFQVSTGDNWN
GIMKDTLRECPPGGSGSDYSCHAGLQFISPLYFVSFVLTAQFVLINVVVAVLMKHLDDSN
KEAQEDAEMDAEIEMELAQGGLCCMMGGIGAIAGATGSAVSGAGAGAAGAVGGPGATSDE
GGGGGAHEGLAQRRCRLFSPALESQWLDSVSLLIKDSLEGDMIDNLSGSVFHHYSSPPVC
KDCRSHPQEQIKLAEVEQASLMSEQLSDKSSSLRCLTT
NT seq
5877 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcgaggaggaggagggggccggcattgcagcatcgacaccatcaagagcggca
gcggccaccttcgagggagcaacagcaactgcagggggcgacggcgaggatgctgccgct
tcctcctcccctcggaggacctccactcatcacctcctctgtcctgagcaaaaggaggag
aaaagtaaaggaatagaggaggaggaggaggggaggatcgtgcatgaagagaggattgag
aaggaagaggatgaggagatagtggaggcagaggaaggtgacgacgacgacgatgatgat
gatgatgatgatgatggcagcagtaacaccagtatgctggtggttccctaccctgagctg
gtaccggtggtcttcttctgcctgaaacagacgacctgcccccgcagcttgtgcatccgc
atggtctccaacccgtggtttgagcgcgtcagcatcatggtcatcctgttgaactgcgtg
accctgggaatgtatcagccctgtgagaacatcgactgctcctcagaccgatgtcaaata
ctgcaggcttttgatgcgttcatctacattttcttcgctctggagatggttgtaaagatg
gtggccctgggaatctttggccgcagatgttacctcggggacacgtggaatcgactggac
ttcttcatcgtcatggcagggatggttgaatattcgctggacctgcagaatatcaatttg
acggccatcagaacagtccgagtactacggccgctcaaagcaatcaacagagtgcccagc
atgcgcatcctcgtgaacctgctgctcgacaccctgccaatgctgggcaacgtcctcctc
ctctgcttctttgtcttcttcatctttggcatcattggcgtacagctgtgggcggggctt
ctgaggaaccgctgctacccagaggagaacttcacactgaccacagggattagtctgccc
cggccgtactacatggccgacgaggacgacgagcggcccttcatctgctccctccgtgag
gacaatggcatcatgtcctgctccgacatccccactcgccgcgagggtggccgggtttgt
tgcttggacaaagaggacgtcctttaccgccaatctctgggcctgagcccggagcctatg
accaatgggagcgccagtgtgggagggctgtgtgtcaactggaaccagtactacaccagg
tgtcatactggacacagcaaccctcacaaagaggccatcaactttgacaacattgcctat
gcctggatcgtcatatttcaggtcatcaccctggaggggtgggtggagatcatgtactat
gtaatggacgcacactccttctacaacttcatctacttcattctgctgattattgtgggt
tctttcttcatgattaacctgtgcctcgtggtcatcgccacccagttctcagagaccaag
cagagagagcaccagctgatgcaggagcagcgagcacagtgtttgtcctcctccaccctg
gcgagcgagcccggagactgctacgaggagctcttccagcttgtctgccacatcctgcgc
aaagccaggaggcaaaccgtcattctgttcaacaccctgcggggaaaacctcgcgggttc
cgcggcgtcgggagaggaagaggaggaaaaaggagggagcggaaagccaatggaagagag
ggccgtcagagggctgcaatgaggagacatgctgcaccctgtcctcaccataacaagcct
gaccacacttcacccatggccctcacctccgcctccgtcagagacggctgcccccagtgt
gccacggccctttcgctctccgatggagtcggtccagtttgcaccgaaaaggatgaagcg
gacgatggagccgtggaggagaccgatggggagggggtttcttccagtaacaaagagaag
agacgggagggcgccgcaaaccacaagggctgctgccccaggagaacatgcaaggacatt
tggtacggcacccgggtgaagctgtgggagatcgtggagagcaaatacttcaacagaggc
attatgatcgcaattctcatcaataccatcagcatgggcatagagcaccacgagcagccg
gaggaactcaccaatgtcctggagatctgcaacatcgtcttcaccagcatgttctccttg
gagatgatcctcaaactgacagcctttggctctttcaactacctgaggaacccctataat
gtctttgatggagtgattgtcattataagtgtgtgcgagattgttggccagtccgacgga
ggtctgtctgtgctgaggaccttcaggctgctcagggtcctgaagctggtcaggttcatg
ccggccttgaggagacaactagtggtgctcatgaagaccatggacaatgtggccactttc
tgcatgctgctcatgctcttcatcttcatcttcagcattctcgggatgcacatctttggc
tgtaagttcagtatcaaaacagagacgggggacacggtaccggatcggaagaactttgac
tctctgctctgggccattgttactgttttccagattctgacgcaggaggactggaacgtg
gttctgtacaacggtatggccgccacgtcaccactagctgctctttactttgtggccctc
atgacttttggcaactatgtcctgtttaacttgctggtggcgatcttggtggaaggattt
caggcagagggagatgctaaccgctccaattccgatgacgaccgctcttcttccaacttt
gatgaaagtgagaagcacgactcgataaagctgtctgacccgaggatctgcacactgaca
ccaaatggccatctggagctaggcggctgttctagttccagggggtcctactcttcagag
aggcggagcgtcactgtggactcgaggaagagcagcgtgatgagcctcggcaagagcagc
ctggagagacgctccctttctttacgtcatggccgcagttccaattaccacaactggggg
cgccctctccctccacattcaggatggagtcgcaggtccagctcaaacagtctgggtcgg
aggagttacggctttggaggggctccacttgtaggaggaagtctgcgcgtgcgcagcagc
tgctccccccagtcttacccctattccgcagaacaagagtccctcctcactcatccttcc
cactctcaccatcctctatccaaacatcacccacccccacctctgctgctgtccagacac
tttgctaggaggagggatcgacgggccctttccctggagctcccagagcttctccgcgct
ggaggacaacctccaggtcacccacccttccacccagatactgggaggaagagcgggtgt
ggtgccgggggctctgtcaccggaggctctgggattggaagtggactgggaggggggcac
cgggattgtaatggcaagacgccgggtattcacactcggctgatgtctgaggttttccca
caggtcaacgcgcgtaaagatcgtgcagatctggacgaagaaacagattatagtttgtgc
ttccgcatccagaagatgatagaggtgtacaagcccgactggtgtgagaccagagaggac
tggtccgtctacctgttttccccacaaaacgggttccggctgctctgccagtccataatc
gcccacaagctctttgactacgtggttctggtctttatctttctcaactgcatcacggtg
gccctggagaggccgaagatactccaaggcagtgtagagagggtgtttctcacaatctcc
aactatatcttcaccaccatcttcgtggctgagatgaccgtcaaggtggtgtccatgggt
ctctacctggggnnagaaacctacctcaggagcagctggaacatcctggatggtttcctt
gtcttcgtgtccctcattgatatcgtggtgtccatggcgggcggagcaaaaatcctggga
gtcctccgtgttctcaggctgctcaggacgctgcgccccctcagggtgatcagcagggca
ccaggactgaagcttgtcggggagacactcatcacatccctcaagcccatcggcaacatc
gtcttaatctgctgtgccttcttcatcatctttgtgtgtttgccttcgcagctcttcaaa
gggaagttttactactgcgtgggcttcgacgtgaagaacatcaccaacaagtccgactgt
ctggctgccaattaccgatgggttcatcacaaatacaacttcgacaacctcggacaggct
ctcatgtccctgtttgtactggcctcaaaggacggctgggtcaacataatgtaccacggc
ctggatgctgtgggaattgaccagcagcccatcaccaacnaacacccatggatgctgctc
tattttatctccttcctcctcattgtcagcttctttgtcctcaacatgtttgtgggtgtt
gtggttgagaacttccacaagtgccggcagcatcaggaggtggaggaggccaagagacgg
gaggagaaacgtcagcggcgcatggagaaaaagaggagaaaggcacagaagctgccctac
tatgcctcttacggtccagcccgactggccatccataccctgtgcaccagccactaccta
gacctggtcatcaccttcatcatctgcatcaacgtcatcaccatgtctctggagcactac
agccagccccgggtgagcggatggggagttagaactctcttggagacggcgctcaagtac
tgcaactacgtcttcacctccacctttgtgatcgaggcctcactgaagctcgtggctttc
ggcttccggcgcttcttcaaggacaggtggaaccagttggacctggccattgtgctgctg
tcagtgatgggtataaccctagaagagatagagagcaatgcctccctccccatcaacccc
accatcatcaggataatgagggtactcaggatagcacgagtgctgaagctgctgaaaatg
gccactgggatgagagctctgctggacaccgtggtccaggctctgcctcaggtgggaaat
ctcggtctgctcttcatgctgctctttttcatctacgcagctcttggagtggagctcttt
ggagagctggtgtgtaacgctgactacccctgtgagggaatgagccgccacgccaccttt
gagaactttgggatggctttcctcacactcttccaggtttccactggtgacaactggaat
ggcatcatgaaggacaccctgcgagaatgcccaccgggtggttcagggagtgactacagc
tgccacgcagggctgcagttcatctcccccttgtactttgtgtcttttgtgctgacggcg
cagtttgtcctgatcaacgtcgtggtggcagtgctcatgaaacatctggacgactccaac
aaggaggcgcaggaggatgcagagatggatgccgagatcgagatggagctggcacagggg
ggcctctgttgcatgatggggggcatcggtgccatcgctggggcgacaggcagtgctgtg
agtggggccggcgctggtgcagccggggcagtcggaggtccgggcgcgacatcagatgaa
ggaggaggtggtggagctcacgagggactcgcgcagcgtcgatgtcgactcttctctcca
gctctggagagccagtggttggacagtgtgtccctgttaattaaggactccttggaaggg
gacatgattgacaacctctctggttccgttttccatcactacagttctcctcctgtctgc
aaggactgcaggagccacccacaggagcagattaaactggcggaggtggagcaggcatcc
ctcatgtcggagcagctgtccgacaagtcgtcctctctgcgctgcctgacgacctga
DBGET
integrated database retrieval system
