Takifugu rubripes (torafugu): 101079879
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Entry
101079879 CDS
T02386
Symbol
hdac6
Name
(RefSeq) histone deacetylase 6
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
tru
Takifugu rubripes (torafugu)
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tru01009
]
101079879 (hdac6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tru03019
]
101079879 (hdac6)
04131 Membrane trafficking [BR:
tru04131
]
101079879 (hdac6)
03036 Chromosome and associated proteins [BR:
tru03036
]
101079879 (hdac6)
Enzymes [BR:
tru01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
101079879 (hdac6)
Protein phosphatases and associated proteins [BR:
tru01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
101079879 (hdac6)
Messenger RNA biogenesis [BR:
tru03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
101079879 (hdac6)
Membrane trafficking [BR:
tru04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
101079879 (hdac6)
Chromosome and associated proteins [BR:
tru03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
101079879 (hdac6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
101079879
NCBI-ProteinID:
XP_029689767
Ensembl:
ENSTRUG00000004270
LinkDB
All DBs
Position
3:complement(273186..281182)
Genome browser
AA seq
1095 aa
AA seq
DB search
MDSGDPPDSGPKPIRRSPRLLPQCSNVSVKGRKGESSLQEVKRRGRMERSREEEEDLDDS
LKMLNLSSGPSASGTGLVFSEIFTHHENLWDSSHPERPERVASIMEHLEQQDLLSRVTRV
QPREATEKELLLCHSQHYVDLMKSTQTMTEEELHSLSDKYDSIYLHPESFSVAVMAVGSV
LQLVDQVMTSELRNGFAVVRPPGHHAQKDLPNGFSIFNNVAIAARYAQTRHSVSRVLIVD
WDVHHGQGIQYLFQEDPSVLYFSVHRFEQGSFWPHLPESDSHFVGSSGAEGSNINLPWNK
TGMKDADYIAAFQQLLLPVAHEFQPQLVLVCAGFDAAAGDEKGQMCVRPQCFHILTHMLM
SLAEGRLVLALEGGYNLQSTAEGTAACVRALLGGACPPLATPTAPSDSALRSISQTLSAL
FPYWPSLQILEGGPWSTDGVLRTTSAEHTAELSSHAPSVATATGLVYDERMMEHLNLWDR
HHPEQPQRISKIFSQHQELGLVDRCRSIPARLATEEELCMCHSVQHVHQMRATATMKPRE
LHKLGDEFNSIYINNQSFQAALLAAGGCFSGVEQILAGQVRNGVAIVRPPGHHAERDFPC
GFCFFNTAALAARHAQKLSQDAPLHVLILDWDVHHGNGTQHMFEDDDSVLYISLHRYDNG
AFFPSSEDAAPDRVGVAKGVGYNVNVAWSRGRMGDSDYLAAFHHVVMPVATEFNPDLVLV
SAGFDAARGDPLGGYHVTPEGYAHLTHQLMSLAGGRLLLILEGGYNLSSISKSMAMCTSV
LLGDPPPALLTPLPPPHHSAVATINEVIRCHAPYWRSLRIHIPESVRASLPSPKDHGKRS
SRGKGRKSEETRRDKPPMSPPRQRGTLVDQSLEALTRGLASLDITQTAASPSPATSTPVG
GARPKVHRSPQMLTCDQEVKVESREQTCSAPRSQPEAQAAVQLAATGSGSAGGAGPGPEA
KGACGGSASQHSMELTRGGQINALYVVDPLPWCPHLDAVKPLPPSGVDIFKPCQDCGSEV
ENWICLTCYQVFCGRYVNEHMVTHGVVAEHPVVLSFSDLSVWCYLCEAYIHNQILFEAKN
SAHWAKFGEEMPSWS
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atggattcaggagaccctccagattctggaccaaagccaatcagaaggtccccccgtctg
ctacctcagtgcagcaacgtaagtgtgaagggacgcaagggagaaagcagcctacaggag
gtgaagaggagaggaagaatggagcggagcagagaggaagaggaagacttggacgacagc
ctgaagatgctgaatctgtccagtgggccatcagccagtggaacgggtctggtgttctcg
gagatcttcactcaccatgagaacctctgggattccagtcatccggagagacccgagaga
gtggcgtccatcatggagcacctggagcaacaggacctgctgtcacgggtcaccagggtg
cagcccagagaagctacagaaaaagagctgctactctgccacagccaacattatgtggat
ttgatgaagtcgactcagaccatgacggaggaggagctgcacagcctgtcggacaaatac
gactcaatctaccttcatccggagtctttctccgtggccgtgatggcagtgggttcggtg
ctgcagctggttgaccaggtcatgacctccgaactcaggaatgggttcgctgtggtcaga
cctcctggccatcacgctcagaaggaccttccaaacggtttctcgatcttcaataatgtg
gcgatcgcagctcgatacgctcagaccagacactcagtgagcagggtgttgatagtggac
tgggatgttcatcacggacagggcatccagtacctgttccaggaggaccccagtgtgctg
tacttcagtgtgcacaggttcgagcagggctccttctggccccaccttccagagtccgac
agccattttgttggatcttcaggagctgaaggcagcaacatcaacctgccctggaacaag
acggggatgaaggatgctgattacatcgcagcgttccagcaactgctgctgccagtcgct
cacgaatttcagcctcagctggttttggtctgtgctggatttgatgcagcagctggagat
gagaaggggcagatgtgtgtgcggcctcagtgtttccacatcctcactcacatgttgatg
agtttggccgaaggtcgacttgttctggctctcgagggaggatataaccttcagtcaaca
gcagagggcactgcagcgtgtgttcgagctctgctgggaggagcctgtcctcctctggcc
acgcccacagccccttctgacagtgctttgcggtccatctctcagactctctcagccctg
ttcccatattggccttctctgcagatactggaaggtggcccctggtccacagacggtgtc
ctgagaacaacaagtgctgaacacacagcagagctcagtagccacgcaccctctgttgcc
acagcaacaggcctggtttatgatgagcgcatgatggagcacctgaacctgtgggacaga
catcaccccgaacaaccacagaggatctctaagatcttctcccaacatcaggagctggga
ctggtggaccggtgccgatccatcccagcgcgcttagcaacggaggaggagctgtgcatg
tgtcacagtgtgcagcacgtccaccagatgcgtgccacagccaccatgaagcccagagag
ctgcacaaactgggagacgagttcaactccatatacatcaacaaccagagcttccaggct
gctctgctggctgctggaggctgcttcagcggtgtggagcagatcctggcgggacaggtg
aggaacggcgtggccattgttcggccgccaggtcaccacgcagagagagattttccctgt
ggcttctgtttcttcaacacggcggctctcgctgctcgccacgcccagaaactgtcccag
gatgcaccgctgcacgtccttattctagactgggatgttcaccacggcaacgggacgcag
cacatgtttgaggacgacgacagtgtcctgtacatctctcttcatcgctacgacaacggg
gctttctttccatcttccgaggatgccgcccctgaccgagtgggcgtggccaagggggtg
gggtataatgtcaacgtggcgtggagcagaggacggatgggtgactctgactacctcgct
gccttccaccatgtggtcatgcctgtggccaccgagtttaaccccgacctggttcttgtg
tctgctggctttgacgcagctcgtggggacccactgggggggtatcatgtgactccggag
ggttacgcacacctgacccaccagctgatgtcactggctggggggcggctcctgctcatc
ctggagggaggttataatttatcatccatctctaaatccatggcaatgtgcaccagcgtg
ttgctgggtgaccctcctccggctttgctcacacccctcccacccccccatcacagcgcc
gtggcaacaatcaatgaggtcatccgatgccacgccccctactggcggtcactgaggatc
cacatcccagagtccgtgcgggcctccctgccgtctccaaaggatcatgggaaacgtagt
tccagaggaaaaggcagaaagtcagaggagaccagaagggacaaacctccaatgtcccca
ccaagacagcggggcactttggtggaccaaagtctggaggcactgacgcggggacttgcc
agcttggacatcactcagaccgcagccagtccctctccagctacgtccaccccagtagga
ggggccaggccgaaggtccaccgtagcccacagatgctcacctgtgatcaggaggtgaag
gtggagtcacgggagcagacctgctcagcaccgaggtcccagccagaggctcaggctgca
gtccagctggctgccactggaagtgggtctgctggtggagctgggccgggtccagaggca
aagggcgcctgtggcgggtcggcctcgcagcactctatggagctcacgcgtggaggacaa
atcaatgcgctgtatgtagtggaccctctgccctggtgtccccacctggatgccgtaaag
ccgcttcctccctctggtgttgatatctttaaaccctgtcaggactgtggttctgaagtc
gagaactggatctgcctcacctgctaccaggtcttctgtggccgctacgtgaacgagcac
atggtgactcacggcgtggtggcggaacaccctgtggtgctgagcttttcggacctgtcg
gtgtggtgctacctgtgcgaggcctacattcacaaccagattctatttgaagcaaaaaac
agtgctcactgggccaagtttggagaggagatgccttcctggagctaa
DBGET
integrated database retrieval system
